[Chimera-users] How to select residues/atoms only those within my cryo-EM map region

Kim, Doo Nam doonam at lanl.gov
Sat May 4 22:20:05 PDT 2019




Dear all,


I want to select residues/atoms only those within my cryo-EM map region so that I can highlight/color them.


As I googled ("select atoms only within a map chimera"), I could find only how to select residues/atoms within certain radius from specific position/atoms.


I may use phenix.map_model_cc to see which residues have higher cc to my cryo-EM map and manually select those using a script.


However, I'm just curious whether there is already a good automatic chimera function that I can use to select residues/atoms only those within my cryo-EM map region.


best,

Doonam
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