[Chimera-users] Measurement similarity protein structure

[Nail Besli]

Hi
I superimposed two proteins in chimera with winch algorithms( blossom62)
and p250. The result is the same. Why is the result same for both two
proteins, although I tried two different algorithm settings? I  am using
the chimera's MatchMaker tool. The only thing different is the sequence
alignment score. I attached the result file.

kind regards
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