[Chimera-users] match command
meng at cgl.ucsf.edu
Sun Jan 20 10:34:28 PST 2019
I believe you want this:
match #0:ADP.A #1:ADP.A move atoms
First you give the atoms to match, and then there is a “move” option for whether to move the only the atoms or their whole models. As you saw, moving the whole models is the default.
I hope this helps,
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco
> On Jan 20, 2019, at 10:12 AM, Hernando J Sosa <hernando.sosa at einstein.yu.edu> wrote:
> Dear Chimera,
> Can somebody clarify the syntax of the match command. I am specifically trying to move several atoms (residues or ligands) to match their location in another model *without* moving the rest of the model.
> match #0:ADP.A #1:ADP.A
> works fine but moves the whole model #0
> match #0:ADP.A #1:ADP.A atoms
> Or using any other option after the atom specifications generate the following error:
> "an even number of space-separated atom specs are required"
> According to the user-guide website the syntax is:
> match atom-spec1 atom-spec2 options
> Not sure what the problem is.
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