[Chimera-users] Values at Atom Oositions

Hernando J Sosa hernando.sosa at einstein.yu.edu
Mon Nov 19 13:50:09 PST 2018

Ok, now it works.
Thanks Elaine!


-----Original Message-----
From: Elaine Meng [mailto:meng at cgl.ucsf.edu] 
Sent: Monday, November 19, 2018 4:15 PM
To: Hernando J Sosa
Cc: chimera-users
Subject: Re: [Chimera-users] Values at Atom Oositions

Hi Hernando,
The answer is to close IDLE — you don’t need it to enter your script.  Instead put your script in a python file (something.py) and then open this file with the open command or menu: File… Open.

> On Nov 19, 2018, at 12:50 PM, Hernando J Sosa <hernando.sosa at einstein.yu.edu> wrote:
> Dear Elaine
> 	from chimera.tkgui import saveReplyLog
> 	saveReplyLog("savefilename")
> Does not seem work, the resulting file is empty. I think the reason is 
> that when idle is open the output of a command like from chimera 
> import runCommand as rc rc("measure mapValues #0 #3 name vdatatom 
> report all")
> is directed to the python shell instead to the Reply log.
> So I am still unclear on how I can save the output to a file within a python script?
> Thanks
> Hernando

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