[Chimera-users] (1) Autodock Vina executable on windows (2) selection of submodels

Visvaldas K. coyote_v2002 at yahoo.com
Mon Nov 12 22:05:51 PST 2018


Dear colleagues,
I'd like to report a couple of issues which have cropped up.
(1) On Windows, running Autodock Vina in Chimea using local executable fails due to spaces in file path (gives error something like "File "C:\Program" not found). The thing is, the university computer admins do not allow change paths or copy system files around. It should be possible to escape spaces in file names, wouldn't it?
(2) The selection of submodels does not work if it is used as a part of the list. For example,
"sel #1.1" selects just the submodel 1 (let's say I have a set of 20 molecules in sdf file), which is fine, while "sel #1.1,#0" selects ALL submodels in #1 in addition to #0, and that does not seem to be right.
Best regards,
Visvaldas
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