[Chimera-users] co-factor FAD in autodock-vina

宋青 chingsong962005 at sas.ustb.edu.cn
Wed Oct 8 20:27:39 PDT 2014

Dear Chimera Design Team,

We have been using Chimera 8.1 and autodock-vina for small molecule and protein interaction analysis. We came across a protein structure (PDB code 2vfs) with a co-factor FAD enclosed. We would like to know if we could dock a sugar into the substrate binding site with the FAD molecule in situ.  Thank you for your help.

Ching Song, Ph.D.
Department of Biological Science and Engineering

School of Chemistry and Biological Engineering
University og Science and Technology Beijing
Xue Yuan Lu 30, Li Hua Lou Room 111
Hai Dian District
Beijing 100083, P. R. China
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