[Chimera-users] average pdb

[edu troche]

Hi chimera users, I was wondering if there is any way to build an average
pdb from an Amber MD simulation of a system that doesn't contain any
biopolymer. I know there is a script within the Amber suite, to generate an
average pdb, but I'm doing the MD in several parts, and then reimaging
them, so I wanted to check if the results of the Amber script, that makes
an average on the coordinate file (.rst) without centering the system, is
the same that I could have after applying the reimaging-centering script.

Thank you!


-- 

Eduardo Troche Pesqueira <http://webs.uvigo.es/webqo3/people/eduardo.html>
Tel. 986812309
Edificio E, Andar 3º, Laboratorio1
Facultade de Químicas
Departamenteo de Química Orgánica
Lagoas-Marcosende
Universidade de Vigo
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