[Chimera-users] Visualising AutoLigand affinity points
gtzotzos at me.com
Thu Feb 9 11:25:21 PST 2012
The command ~bond does the trick. I get what I want. Many thanks as always
On Feb 9, 2012, at 6:23 PM, Elaine Meng wrote:
> Hi George,
> A picture alone isn't that useful. Would need the actual file to be sure, but you might try using command "~bond" to remove all bonds, and then showing as "ball" (actually ball & stick but without bonds there will just be balls). Or if those are not the right size either: when showing either balls or spheres, you can adjust size to any value using the "vdwdefine" command.
> Elaine C. Meng, Ph.D.
> UCSF Computer Graphics Lab (Chimera team) and Babbitt Lab
> Department of Pharmaceutical Chemistry
> University of California, San Francisco
> On Feb 9, 2012, at 6:05 AM, George Tzotzos wrote:
>> I'm attaching a jpg image of ligand affinity map fill points generated by AutoLigand. My question is whether there's a way to depict these fill points as "disconnected" spheres.
>> Actions/spheres generates something like I'd like to see but the size of the spheres is too large.
More information about the Chimera-users