[Chimera-users] Error in viewing trajectories

George Tzotzos gtzotzos at me.com
Mon Nov 28 02:37:30 PST 2011

Yesterday I posted a message regarding Chimera issuing error messages on trying to open trajectory files.

The error was "TypeError: Attempt to form duplicate covalent bond."

I believe that the problem arises from the fact that in preparing the topology files with ANTECHAMBER (tleap) in AMBER, I generated disulfide bonds. My guess is that the problem lies there. Has anyone observed similar behaviour?

Best regards


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