[Chimera-users] problem with a script calculating distance between residues

[Damien Larivière]

Dear all,

The script below has been validated for me by the Chimera team sometimes 
ago.

In fact this script does not work each time I run it: When reaching the 
pdb dockSL0007.pdb, or dockSL0010.pdb, or dockSL0020.pdb,... Chimera can 
remained fixed on the current PDB file as if it faces problem to open 
it. I'm forced to close Chimera which does not respond anymore. The exit 
code is 805306369. I attached dockSL0009.pdb and dockSL0010.pdb.

What can I do to report this bug (which may be due to something external 
to Chimera; my Chimera version is 1.5.2 Build 32411; my plateform is 
Windows 7 64 bits) since I have to brutally stop Chimera, and know more 
about this problem?

Many thanks for your help

Damien

from chimera import runCommand as rc
#from chimera.tkgui import saveReplyLog
for i in range(1, 101):
     rc(r"open C:\Program Files (x86)\Hex 6.3\examples\New Hex 
run_SL_250211\FirstRun_S_Ldimer\dockSL%04d.pdb" % i)
     rc("distance :246.C at CB :297.A at CB")
     rc("distance :246.C at CB :297.B at CB")
     rc("close all")
     #rc("saveReplyLog('replyLog%04d.txt')" % i)


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