[Chimera-users] Per-atom RMSD

Ibrahim Moustafa I.moustafa at psu.edu
Fri Oct 8 13:52:44 PDT 2010


Dear Chimera,
 

I have a question regarding RMSD: I have two structures to superimpose
using certain residues; and I am interested to get the RMSD value for each
CA-atom in the structure. I wonder if there is a way to do that in Chimera?
 I think there is no direct way; but I wonder if there is a script that can
be used for that.

For the developer: It might be useful to have a tool that can directly do
that in Chimera

     Many thanks for help,
     Ibrahim


-- 

Ibrahim M. Moustafa, Ph.D.
Biochemistry and Molecular Biology Dept.
201 Althouse Lab., University Park,
Pennsylvania State University
PA 16802

Tel. (814) 863-8703
Fax (814) 865-7927

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