[Chimera-users] H Bonds in MD simulation

snoze pa snoze.pa at gmail.com
Thu Jan 28 10:51:14 PST 2010

Dear Chimera Users,

 I am analyzing a MD trajectory in chimera. After selecting H binds
when I am playing the trajectory, then it always shows the hydrogen
bond. Though some of the bonds are broken during the simulation but it
always connect the step 1 h bonds connected.. How can I show the h
bonds which breaks during the simulation.

Thank you very much for your help.

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