[Chimera-users] HELP: I'm wondering about how to access the surface data

"郑捷凯" 09301010115 at fudan.edu.cn
Fri Apr 16 18:34:38 PDT 2010


Thank you!
So I can't just open a new python script and import chimera without ./chimera

I still don't know how to get the surface data(It's all triangles right?)
say:
>>> import chimera
>>> mlist = chimera.openModels.list()
>>> molecule = mlist[0]
Then what should I do to get the surface calculated and get the data?

> Forgot to mention the mscalc Python interface is the Python 
> MolecularSurface module found in
> 
>      chimera/share/MoleculeSurface
> 
> or on the Mac in
> 
>      Chimera.app/Contents/Resources/share/MoleculeSurface
> 
> Look at the calcsurf.py code which runs the mscalc stand-alone program 
> 
> (include in Chimera) and look at msurf.py if you are interested in the 
> 
> Chimera SurfaceModel class which displays the surface in the graphics 
> 
> window.
> 
>      Tom
> 
> 
> 
> > Hi chimera users,
> > I'm wondering about several question:
> > I installed chimera in my home dir, what's path to import  in python?
> > how can I access the data generated by mscalc in python?
> >    
> 



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