Changes between Version 2 and Version 3 of SiteVisit


Ignore:
Timestamp:
Aug 16, 2011, 9:16:35 AM (15 years ago)
Author:
goddard
Comment:

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  • SiteVisit

    v2 v3  
    1414=== TR&D 2 ===
    1515 * Building a "composite model" and linking molecules, maps and sequences of components.
    16  * Chimera analysis web log.
     16 * Chimera analysis web log.  Would be cool to demo WebGL embedded in Chimera log then shown on a smart phone or tablet as a way to facilitate hallway/lecture-hall/lunch collaborative work.
     17
     18 ==== Biological Systems ====
     19 * [http://www.cgl.ucsf.edu/chimera/data/hiv-core-june2011/hivcore.html HIV Capsid] - Illustrates composite model building of HIV conical core particle.  Capsid protein interfaces highly conserved drug target (June 2011 PNAS [http://www.ncbi.nlm.nih.gov/pmc/articles/PMC3136285/?tool=pubmed paper])
     20 * [http://www.cgl.ucsf.edu/chimera/animations/hivrna/hivrna.mov HIV RNA] - Secondary structure of full HIV RNA, I made 3-d model and animation with Chimera script. Nature 2009 [http://www.ncbi.nlm.nih.gov/pubmed/19661910 paper]).
     21 * [http://www.cgl.ucsf.edu/home/goddard/temp/dengue2.mov Dengue virus] - Maturation of dengue virus involves major rearchitecting of capsid.  Chimera animation shows hypothetical model from Michael Rossmann lab.
     22 * [http://www.cgl.ucsf.edu/Research/auer/gut-sep2010/ Termite gut] - Segmentation tool demo.
    1723
    1824=== TR&D 3 ===