Changes between Version 9 and Version 10 of SiteVisit

Timestamp:

Aug 26, 2011, 11:00:12 AM (15 years ago)

Author:

meng

Comment:

--

SiteVisit

@@ -13 +13 @@
 == Ideas of what to show ==
 === TR&D 1 ===
+ * BLAST service
+ * Modeller interface
+ * multiple alignment Conservation header (sequence conservation, AL2CO options include entropy, variability, etc.)
+ * multiple alignment RMSD header (spatial conservation of associated superimposed structures)
+ * render by attribute (could be attribute from MAV header or other such as bfactor or Modeller error profile)
+ * UniProt annotations on sequence either from direct UniProt fetch of sequence or using PDB/UniProt Info tool
+ ** if useful for system... good for showing relationship of gp120 core constructs in which loops had been replaced with stubs to the full-length sequence (unfortunately PDB SIFTS service has a data problem with 1GC1 but 1GM9 is nearly identical and could be used instead)
 
 === TR&D 2 ===