Changes between Version 15 and Version 16 of Scripts

Timestamp:

Aug 5, 2009, 2:55:16 PM (17 years ago)

Author:

goddard

Comment:

--

Scripts

@@ -3 +3 @@
 These Python scripts provide capabilities not available using Chimera commands.  They may only work with specific Chimera versions.
 
+ * [attachment:xyzsdmap.py xyzsdmap.py]. Makes a volume data set from a text file of xyz points with standard deviations along each axis. Each point is represented as a Gaussian. Tested with Chimera 1.4 daily build August 3, 2009.
  * [attachment:xyzmap.py xyzmap.py]. Makes a volume data set from a text file of xyz points. Each point is represented as a Gaussian. Tested with Chimera 1.4 daily build August 3, 2009.
  * [attachment:pqr2chimera.py pqr2chimera.py]. Split a PQR file into a PDB file that Chimera can read (chimera.pdb) and a [http://www.cgl.ucsf.edu/chimera/docs/UsersGuide/midas/defattr.html defattr file] (chimera.defattr) for assigning the PQR charge attributes if preferred to Chimera charges. Script should be run using Python from a shell rather than inside Chimera.  The defattr may be processed slowly by Chimera due to using "@/serialNumber" selector -- script could be probably be speeded up by moving to ":res@atom" style selectors.  Tested with Chimera 1.4 daily build August 3, 2009.