Changes between Version 18 and Version 19 of Release1.4

Timestamp:

Nov 24, 2008, 4:53:44 PM (17 years ago)

Author:

meng

Comment:

--

Release1.4

@@ -17 +17 @@
  1. Nucleotides: saved in sessions, dialog settings maybe sticky, "nucleotides" command, possibly use in preset. ECM
  1. MD Movie: checkbox in Per-Frame panel and/or Record Movie panel to recompute secondary structure (make it more obvious that ribbon display may need to be updated). ECM
- 1. Build Structure allow bonding of one clump of atoms to another clump of atoms in a way that automatically repositions one clump instead of requiring the user to attempt to maneuver it into the appropriate bonding position. ECM
+ 1. Build Structure: allow bonding of one clump of atoms to another clump of atoms in a way that automatically repositions one clump instead of requiring the user to attempt to maneuver it into the appropriate bonding position. ECM
 
 ==== Documentation ====
@@ -78 +78 @@
 ==== Sequence/Structure (Core 4) ====
 
- * connect to our own Web service to BLAST on PDB, provide dialog for choosing which hit structures to open, whether to show pairwise sequence alignment from BLAST (in MAV), whether to superimpose hit and query structures (with Matchmaker). ECM
+ * connect to our own Web service to BLAST on PDB, provide dialog for choosing which hit structures to open, whether to show pairwise sequence alignment from BLAST (in MAV), whether to superimpose hit and query structures (with Matchmaker). Input is sequence of molecule model already open in Chimera. ECM
     * (search other databases such as NR? PSI-BLAST on NR?)
  * connect to our own Web service to multiple sequence alignment program (Muscle, T-Coffee, ... see [http://www.cgl.ucsf.edu/home/meng/sources.html#d list and links]), show result in MAV. I guess input to server would be sequence alignment sent from MAV, probably would have to reformat into unaligned multi-FASTA. ECM