Changes between Version 15 and Version 16 of Release1.4

Timestamp:

Nov 24, 2008, 4:47:20 PM (17 years ago)

Author:

meng

Comment:

--

Release1.4

@@ -82 +82 @@
  * connect to our own Web service to multiple sequence alignment program (Muscle, T-Coffee, ... see [http://www.cgl.ucsf.edu/home/meng/sources.html#d list and links]), show result in MAV. I guess input to server would be sequence alignment sent from MAV, probably would have to reformat into unaligned multi-FASTA. ECM
  * allow editing sequence name. ECM
- * allow specifying sequence accession (Uniprot perhaps?) for annotation retrieval. ECM
+ * allow specifying sequence to add by accession (Uniprot perhaps?).  Its feature annotations would automatically come along as regions.  ECM
+ * for other sequences, allow specifying sequence accession (Uniprot perhaps?) for annotation retrieval.  (actually I don't know if that would work - what if the existing sequence and that uniprot sequence were even slightly different?) ECM
     a. send accession to Uniprot, get back XML with feature annotations, load them as sequence regions. ECM
  * easier reporting of amino acid phi,psi,omega,chiN (perhaps this is Chimera core but one could imagine some connection to Multalign Viewer since it only applies to peptide/protein sequences). ECM