Changes between Version 14 and Version 15 of Release1.4


Ignore:
Timestamp:
Nov 24, 2008, 4:42:13 PM (17 years ago)
Author:
meng
Comment:

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  • Release1.4

    v14 v15  
    7878==== Sequence/Structure (Core 4) ====
    7979
    80  * connect to our own Web service to BLAST on PDB, provide dialog for choosing which hits to open, whether to show pairwise sequence alignment from BLAST (in MAV), whether to superimpose hit and query (with Matchmaker). ECM
     80 * connect to our own Web service to BLAST on PDB, provide dialog for choosing which hit structures to open, whether to show pairwise sequence alignment from BLAST (in MAV), whether to superimpose hit and query structures(with Matchmaker). ECM
    8181    * (search other databases such as NR? PSI-BLAST on NR?)
    82  * connect to our own Web service to multiple sequence alignment program (Muscle, T-Coffee, ... see [http://www.cgl.ucsf.edu/home/meng/sources.html#d list and links]), show result in MAV. ECM
     82 * connect to our own Web service to multiple sequence alignment program (Muscle, T-Coffee, ... see [http://www.cgl.ucsf.edu/home/meng/sources.html#d list and links]), show result in MAV. I guess input to server would be sequence alignment sent from MAV, probably would have to reformat into unaligned multi-FASTA. ECM
    8383 * allow editing sequence name. ECM
    8484 * allow specifying sequence accession (Uniprot perhaps?) for annotation retrieval. ECM