Changes between Version 24 and Version 25 of HIVspikes

Timestamp:

Oct 9, 2009, 11:07:43 AM (17 years ago)

Author:

meng

Comment:

--

HIVspikes

@@ -153 +153 @@
 [[Image(pairMAV2.png)]] 
 
-Another possibility here is calculating percent ID (Tools... Percent Identity).
+Another possibility here is calculating percent ID (in Multalign Viewer menu, Tools... Percent Identity).
 
 == Conservation alternative (Elaine) ==
@@ -164 +164 @@
 
 The gray segment in gp120 is where the alignment column had too few sequences (too many gaps) to calculate a reliable conservation value.  The redder, more variable parts of the gp120 core structure are not interacting with the other chains.
+
+Another possibility is using (main menu) Select... Sequence... gag to show where longer loops were replaced with gly-ala-gly to create this crystallizable gp120 core construct.
 
 == Cytoscape ==