Changes between Version 161 and Version 162 of COT
- Timestamp:
- Oct 21, 2014, 11:41:58 AM (12 years ago)
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COT
v161 v162 59 59 October 21, 2014 60 60 61 UCSF BP205A,"Physical Underpinnings of Biological Systems" class: 1-hr presentation to 25 students focus ing on showing sequence conservation on structures using Chimera. Covers obtaining a sequence alignment if you don't already have one, using methods available within Chimera to calculate per-column conservation and show it on structures with colors and/or worms, or creating an attribute file or alignment header file to import values that have been calculated outside of Chimera. Prep time 40 hourscreating and rehearsing presentation, making [http://www.rbvi.ucsf.edu/chimera/data/tutorials/systems/outline.html web page] with images and sample data.61 UCSF BP205A,"Physical Underpinnings of Biological Systems" class: 1-hr presentation to 25 students focused on showing sequence conservation on structures using Chimera. Covers obtaining a sequence alignment if you don't already have one, methods available within Chimera for calculating per-column conservation, rendering values with colors and/or worms, importing values that have been calculated outside of Chimera. Prep time 40 hours including creating and rehearsing presentation, making [http://www.rbvi.ucsf.edu/chimera/data/tutorials/systems/outline.html web page] with images and sample data. 62 62 63 63 * Elaine Meng, Eric Pettersen
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