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Changes between Version 111 and Version 112 of COT
- Timestamp:
- Mar 18, 2013, 9:29:07 AM (13 years ago)
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COT
v111 v112 23 23 --------------------------------------------------------------------------- 24 24 25 April 18, 2012 26 NASA AbSciCon meeting, Atlanta, GA. Presentation on Enzyme evolution, networks, 27 and the SFLD. 9 hours prep, 35 attendees. 28 - Patsy Babbitt 29 25 30 April 21, 2012 26 31 UCSF Alumni Homecoming Demonstrations. A series of 30 minute demonstrations were given … … 42 47 - Scooter Morris 43 48 49 May 23, 2012 50 EFI Meeting, San Francisco. SFLD new progress and future plans. ~6 hours prep, 51 15 attendees. 52 - Patsy Babbitt 53 54 June 21, 2012 Lecture for UC systemwide Bioengineering Symposium, Berkeley, CA. 55 Computational guidance for protein design, including superfamilies, networks, and 56 use of the SFLD. 8 hours prep time, 35 attendees. 57 - Patsy Babbitt 58 44 59 June 22, 2012 45 60 Nanomachine and virus visualization demo for 11 [http://igem.ucsf.edu iGem] students ages 17-19. … … 51 66 June 22, 2012 52 67 HIV virus visualization demonstration for 7 high school students in the 53 [http://www.gladstone.ucsf.edu/gladstone/site/cso/section/2461 Gladstone Summer Scholars (GSS) Internship Program]. Looked at electron microscopy and 68 [http://www.gladstone.ucsf.edu/gladstone/site/cso/section/2461 Gladstone Summer Scholars (GSS) Internship Program]. 69 Looked at electron microscopy and 54 70 atomic models of virus core and drug binding. 30 minute demo in viz vault. 55 71 1 hour preparation. Organized by Shannon Noonan, Community Outreach Specialist, … … 81 97 - Tom Goddard 82 98 99 July 16, 2012 100 5th International Conference on Paraoxonases, Columbus, OH. Presented research on the 101 "nucleophilic attack 6-bladed beta-propeller" (N6P) superfamily, including network 102 analysis and data dissemination using the SFLD. 12 hours prep time, 120 attendees. 103 - Patsy Babbitt 104 83 105 July 26, 2012 84 106 Chimera visualization of HIV virus core and drug binding for 20 high school students from the UC Davis … … 127 149 - Tom Ferrin, Scooter Morris, Tom Goddard, Conrad Huang, Eric Pettersen, Elaine Meng 128 150 151 October 14-30, 2012 152 4 hours lecture in BMI206, Introduction to Bioinformatics (UCSF), featuring superfamily analysis, 153 protein similarity networks, and the SFLD. The SFLD was also used as a primary data resource for 154 a course lab assignment. 25 hours prep, ~9 attendees. 155 - Patsy Babbitt 156 129 157 October 17, 2012 130 158 UCSF BP204,"Macromolecular Interactions" class: 35-minute presentation followed by 45 mins of the … … 135 163 - Elaine Meng, Eric Pettersen 136 164 165 November 8, 2012 166 EFI meeting, San Francisco. SFLD new features. ~6 hours prep, ~15 participants including 167 EFI Advisory Committee and NIH representatives. 168 - Patsy Babbitt 169 137 170 November 15, 2012 138 171 Demonstration of Chimera for viewing, segmenting and measuring microscopy data given at the Northern California Society for Microscopy meeting at UCSF. [http://www.cgl.ucsf.edu/chimera/data/ncsm-nov2012/microscopy.html Slides]. Walk through of segmenting and measuring termite gut bacteria. Audience of 50. Preparation time 20 hours. Hosted by Larry Ackerman and Steven Samuelsson. 139 172 - Tom Goddard 173 174 December 2, 2012 175 Lunch talk to faculty, Department of Bioengineering and Therapeutic Sciences, UCSF. The SFLD and 176 enzyme functional annotation. 8 hours prep, 8 attendees. 177 - Patsy Babbitt 140 178 141 179 December 5, 2012 … … 148 186 Gave 3 hour hands-on tutorial for Cytoscape at the 2012 Cytoscape retreat (Gladstone Institutes, UCSF). 60 participants, 8 hours preparation. 149 187 - Scooter Morris 188 189 December 13, 2012 190 Cytoscape retreat (Gladstone Institutes, UCSF). Presentation on protein similarity networks and dissemination using the SFLD. 191 8 hours prep time, 60 attendees. 192 - Patsy Babbitt 150 193 151 194 December 19, 2012 … … 156 199 - Tom Goddard 157 200 201 January 7, 2013 202 Enzyme Mechanisms Meeting Workshop, San Diego, CA. Introduction to similarity networks and the SFLD. 203 12 hours prep time, 50 attendees. 204 - Patsy Babbitt 205 206 January 21, 2013 207 iPQB graduate program (UCSF) pizza talk including an introduction to the SFLD. 208 3 hours prep, ~30 attendees. 209 - Patsy Babbitt 210 211 January 29, 2013 212 Biophysics seminar at UT Southwestern Medical School, Dallas, TX. Similarity networks and the SFLD. 213 9 hours prep, 45 attendees. 214 - Patsy Babbitt 215 158 216 January 31, 2013 159 217 Gave a plenary presentation on Visualization Challenges in Network Biology at the HCI (Human-Computer Interaction) Korea annual conference. 2,000 participants, 20 hours preparation. … … 179 237 180 238 March 4, 2013 181 Short introduction to the SFLD database, Conference on Predicting Cell Metabolism and Phenotypes, SRI international, Menlo Park, USA.239 Short introduction to the SFLD database, Conference on Predicting Cell Metabolism and Phenotypes, SRI international, Menlo Park, CA. 182 240 3 hours prep time and ~100 participants. 183 241 - Eyal Akiva … … 201 259 - Gemma Holliday 202 260 261 April 21, 2013 262 ASBMB (American Society for Biochemistry and Molecular Biology) annual meeting, Boston, MA. 263 Introduction to networks and downloadable information available from the SFLD, as part of the 264 workshop on new strategies for function assignment. Anticipate 8 hours prep time, 75 attendees. 265 - Patsy Babbitt 266 267 May 23, 2013 268 EFI 3-year review. SFLD vision for the next 5 years. Anticipate 8 hours prep time, 15 participants. 269 - Patsy Babbitt 270 203 271 --------------------------------------------------------------------------- 204 272 Past reports [wiki:COT12 2012], [wiki:COT11 2011], [wiki:COT10 2010], [wiki:COT09 2009], [wiki:COT08 2008], [wiki:COT07 2007]
