| | 1 | --------------------------------------------------------------------------- |
| | 2 | "Chimera Outreach and Training" subproject for CGL annual report |
| | 3 | |
| | 4 | activities Jun 1, 2006 - May 31, 2007 |
| | 5 | --------------------------------------------------------------------------- |
| | 6 | July 17-18, 2006 Chimera poster and two ~1-hr demos of basic usage and |
| | 7 | sequence/structure tools (total attendees ~18) at the Gordon Conference |
| | 8 | on Enzymes, Coenzymes, and Metabolic Pathways, July 16-21, |
| | 9 | University of New England, Biddeford, ME |
| | 10 | (Elaine, Eric) |
| | 11 | |
| | 12 | Aug 14, 2006 "Introduction to Molecular Visualization" tutorial (12 people) |
| | 13 | and poster "Tools for Integrated Sequence-Structure Analysis with UCSF |
| | 14 | Chimera" at Computational Systems Bioinformatics Conference 2006, |
| | 15 | Aug 14-18, Stanford, CA |
| | 16 | (Conrad, Scooter) |
| | 17 | |
| | 18 | Sept 7, 2006 30-min demo to ~80 participants at the 2006 Workshop on |
| | 19 | Multiscale Biological Imaging, Data Mining & Informatics, Sept 7-8, |
| | 20 | Santa Barbara, CA |
| | 21 | (Tom Goddard) |
| | 22 | |
| | 23 | Oct 19, 2006 "Fitting and Segmenting EM Maps with UCSF Chimera" 30-min |
| | 24 | presentation to ~60 people at Bay Area CryoEM Meeting, Mission Bay, UCSF |
| | 25 | (Tom Goddard) |
| | 26 | |
| | 27 | Nov 3, 2006 30-min graphics demo to group of ~16 from Santa Rosa Jr College |
| | 28 | (Elaine) |
| | 29 | |
| | 30 | Dec 3-5, 2006 poster at |
| | 31 | Bioinformatics/Biophysics/CCB Retreat, Monterey Beach Resort, Monterey, CA |
| | 32 | (Scooter) |
| | 33 | |
| | 34 | Dec 15, 2006 45-min demo at "Visualization Tools for Cellular Complexity" |
| | 35 | conference, Max Planck Institute of Biochemistry, Munich, Germany |
| | 36 | (Tom Goddard) |
| | 37 | |
| | 38 | Feb 14, 2007 90-min Chimera demo (basic intro, ensembles, attributes, |
| | 39 | sequence/structure, images/movies) for Gross group, UCSF |
| | 40 | (~10 people not counting the RBVI contingent) |
| | 41 | (Elaine) |
| | 42 | |
| | 43 | Mar 3-7, 2007 NIH RR booth at Biophysical Society Meeting, Baltimore, MD |
| | 44 | "Visualizing 3-D Electron Microscopy Data with UCSF Chimera" (Tom Goddard) |
| | 45 | "Introduction to UCSF Chimera" (Scooter) |
| | 46 | |
| | 47 | Mar 14-17, 2007 Workshop on Single Particle Reconstruction and Visualization |
| | 48 | (100 participants), University of Houston, TX |
| | 49 | Mar 15 "Visualization in Chimera" (Tom Ferrin) |
| | 50 | Mar 15 "Chimera Tutorial" (Tom Goddard) |
| | 51 | |
| | 52 | May 4, 2007 45-minute demo (~40 people) and 2-hr hands-on tutorial |
| | 53 | (~15 people) at the Bay Area CryoEM Meeting, UC Davis |
| | 54 | (Tom Goddard) |
| | 55 | |
| | 56 | In addition, Tom Goddard has been participating in the CryoEM Standards Task |
| | 57 | Force on-line meetings (9/18/06 and 10/9/06), and all team members have been |
| | 58 | involved in discussions with the PDB staff regarding their data remediation |
| | 59 | project (Jan-Mar 2007). |