**Phenix** * Command version of fit_loops * Sent test case showing 4-processor version 5x slower than one processor * Immediate to-dos: * Work up test case for fit_loops failing on 2gtk due to residue numbering * Document needs for JSON output from fit_loops * Randy Read added full-map-only mode for voyager.emplace_local; need to update fit-in-map tool **ChimeraX completed** * Build Structure * Adjust Torsions (also in selection context menu) * Adjust Angles * Handle Mol2 files that have GAFF types * Charge computation falls back to more reliable method if faster method fails (courtesy Tristan) * 'Info' commands can save to file * Matchmaker * More reliably switch to 'sensible' similarity scoring matrix * 'reportMatrix' option * Made hiding/closing of large numbers of models faster * Override Strucure 'display' attribute rather than use CLOSE_MODELS trigger * Batch updating of collections * Default format/suffix handling