**Phenix**
 * Allow development builds to be used as phenix installation
 * Further work on Randy Read's fit-in-map tool, (Phenix: voyager.emplace_local, ChimeraX: Local EM Fitting):
    * Clarified wording in search-center dialog
    * Use transform from emplace_local rather than superposition
    * Make maps opaque while search sphere displayed
 * Decided on fit_loops as next tool

**ChimeraX completed**
 * Build Structure
   * Adjust Torsions (also in selection context menu)
   * Adjust Angles
 * Handle Mol2 files that have GAFF types
 * Charge computation falls back to more reliable method if faster method fails (courtesy Tristan)
 * 'Info' commands can save to file
 * Matchmaker
   * More reliably switch to 'sensible' similarity scoring matrix
   * 'reportMatrix' option
 * Made hiding/closing of large numbers of models faster
   * Override Strucure 'display' attribute rather than use CLOSE_MODELS trigger
   * Batch updating of collections
 * Default format/suffix handling