**Phenix** * Fixed bug in "phenix location" (wasn't setting location) * Further work on Randy Read's fit-in-map tool, emplace_local: * Interactive adjustment of search center, and size of marker indicates search size * Move structure to fitted position rather than open a copy * Use emplace_local JSON output * For center-of-view search center: * Use pivot point or fixed center of rotation (if any), otherwise... * Use displayed map (if only one) instead of half map * Improved initial Z-depth estimate (bounding box face intercepts rather then bounding-plane intercepts) * Elaine created documentation * Emplace_local now can estimate resolution, change command and tool to make resolution optional * Put on Toolshed * Awaiting emplace_local outputting transformation matrix **ChimeraX completed** * !SwissDock format * Build Structure "Invert" tab (invert chiral center) and command * Palette and color-key support in Render By Attribute * Structure copy/combine was using a function that modified coordinates in place rather than making a copy * Only mattered if transformation was non-identity, so only manifested if copied structure had been moved * Option to deselect current selection in "Select Zone..." * Plugged memory leak in atomic session saving (append vs. list insertion) * Fixed Dock Prep tool to actually show follow-on dialogs * Create CRYST1 record from mmCIF metadata