= Phenix =

=== Fit Loops ===
 * If structure lacks sequence information, tell user how to supply it

=== Fit Ligand ===
 * Added instructions for blob picking

= ChimeraX completed =
 * Model-panel interface for grouping models
 * Profile Grid
   - Show number of chains associated with cell mouse is in (in addition to number of sequences)
 * Minimization
   - Improved finding the OpenMM atom type for single-atom ions
   - Temporary kludge to fix charges in non-standard residues
   - If GPU fails, fall back to CPU
   - Don't protonate sulfurs coordinating metals
   - Tool
 * Speeded up opening large ligand files by 2x
   - Bottleneck was chain-reporting code for NMR ensembles
 * Altloc Explorer
   - Button to show/hide all existing altlocs
   - Report occupancy in tooltip (also in main 3D window)
 * !ProfileGrid
   - Reporting column info on the fly too slow for very large alignment; for those only report on hover
 * Added ability to time out / continue long-running blocking jobs
 * Alert users to use ASCII paths for Gromacs trajectories
 * Scenes
   - Interpolation of coordinate sets
   - Catch error restoring scene with deleted structure elements, warn user, and restore what we can
   - Remember more structure attributes in scenes, and interpolate simple numeric ones
   - Tool:
     - Drag and drop to reorder scenes
     - When adding scene, ignore conflicting name if it was automatically generated