= Phenix = === Local EM Fitting === * Support pre-fitted models === Fit Ligand === * Mandatory resolution command arg / tool widget * Tool's chain ID / res num widgets pass values to command * Made command fully functional, including checking availability of chain ID + res num * Interactive search-center adjustment = ChimeraX completed = * Added discussion of declaring dependencies on PyPi packages to programming documentation * Made AddH not check for chain formation * Allow H-bond and clash output to be on a per-residue basis * Updating a structure sequence when a residue type changes wasn't accounting for gaps * "center" option for `open` command * Altlocs - Small revamp of altlocs tool in preparation for "show all altlocs" capability - Update ribbon if backbone altlocs changed * Render by Attribute - Histogram scaling - Save to file button - Remember histogram markers on a per-attribute basis - Keep markers at same value position (rather than relative position) when expanding histogram range * Fixed bug making chains where internal residue is non-polymeric * Select by column identity * [http://www.cgl.ucsf.edu/home/meng/jclub/kvfinder.html#/ KVFinder] tool/command