= Phenix =

=== Local EM Fitting ===
 * Support pre-fitted models

=== Fit Ligand ===
 * Mandatory resolution command arg / tool widget
 * Tool's chain ID / res num widgets pass values to command
 * Made command fully functional, including checking availability of chain ID + res num
 * Interactive search-center adjustment

= ChimeraX completed =
 * Support HTML in table cells
 * Sequence viewer expand selection to columns
 * If chains have been created, use that info in determining residue principal atom
 * Log a message when computing secondary structure
 * Label missing segments, and offer control over when they get labeled
 * Stop auto-raising Log when logging occurs
 * Avoid Modeller tool crash by using takeRow() instead of deleteRow()
 * Have render/select histograms update if underlying values change
 * Fixed bug showing alignment from !MatchMaker if Smith-Waterman was used with selection restriction
 * [KVFinder http://www.cgl.ucsf.edu/home/meng/jclub/kvfinder.html#/] tool/command
 * Also worked on: !AmberTools, atom-spec parser, profile grids, match→align