= Phenix =

=== Fit Ligand ===
 * Controls for hiding density near existing structure
   - Still needs tweaking because "mark maximum" doesn't know about surface display
 * Improved reliability of outline box display by using different API
 * Added "conformers" command option
 * Elaine added help page
 * Put some less-often-used options into an "Options" area to simplify initial dialog
 * Added dialog to solicit desired action if conflicting residue number provided

Phenix team will discuss what tool to work on next.

= ChimeraX completed =
 * Find Cavities/kvfinder improvements (Tristan suggestions)
   - Specify search box by using a set of atoms (and a pad value) instead of x/y/z/width/height/depth
   - Allow non-polymeric atoms to be treated as part of the receptor
 * Scene interpolation
   - 2D labels
   - Ribbon styles
   - Better interpolation of pseudobonds and coordinate sets
 * Made Gromacs reader use less peak memory
 * Made local Modeller execution not mistakenly require specifying a license key
 * Profile Grid
   - Show changes in prevalence based on chosen cells
   - Allow cells corresponding to a particular sequence to be chosen
 * Added 'is_reference' attribute to Sequence class
   - For sequences whose numbering should not be changed regardless of structure association (e.g. !UniProt)
 * OpenMM doesn't like non-unique names in a residue
 * Now that Qt no longer remembers editor custom colors automatically, do it ourselves
 * Render By Attribute
   - Programmatically configurable
   - Show it in more cases: !Clashes/Contacts tools; defattr; measure mapvalues