= Attendees =

* Zach, Eric,  Elaine, Greg, TomG, Scooter, TomF

= Agenda =

* Work on R01 grant resubmission text, Google doc (link sent by email)
* Phenix R24.  Tried phenix douse command to place waters.
* Chimera 1.16 release plan.
* Create ChimeraX 1.4 roadmap.
* New desktop computer hardware.
  - Assign host name to new AI machine.  minsky.cgl.ucsf.edu?
* Review Action Items list below

= Discussion Notes =
* Christmas card sent.

* Java critical security log4j bug
  - Scooter dealing with Cytoscape and log4j 2 security vulnerability.
  - Our Apache servers don't use log4j.
  - TomCat uses log4j 1 which does not have plugin weakness.
  - Neo4j was vulnerable and Scooter patched it.
  - Chimera small molecule depiction service uses cdk library, does not have log4j.

* Web services in ChimeraX using REST
  - Would like smiles to 2D depiction without CDK in ChimeraX.
  - Zach working on porting ChimeraX modeller to new web services (replacing opal).
  - Get all services working with ChimeraX, then look at backport to ChimeraX.
  - Everyone will have to run latest Chimera.
  - Zach is testing using webservicestest, then will move to production webservices.

* Web services for Chimera
  - Chimera needs opal service to open mmcif and find ligand templates
  - Might just turn off Chimera services in a year

* Web service status checking
  - Alphafold web services do status checking.
  - Have other ChimeraX web service check a status page on failure.
  - Get this into daily builds.
  - There is a 3 day wynton planned service in February.
    * Can have a static rbvi web site on cglbackup which will stay up during planned service (service is mostly for beegfs).

* Security audit
  - We made many suggestions for corrections to audit report.
  - Who is taking responsibility to update audit report?
  - We can get draft audit report.
  - Scooter sent email to get a reply about requested changes.

* Phenix R24 progress
  - Technical meeting was this morning, Eric, Zach, TomG attended
  - Added ChimeraX Phenix douse command (not yet in daily build), not using REST
  - Phenix nightly build is supposed to have Phenix REST server support tomorro

= Action Items =

* ~~Send xmas card to Conrad - TomG
* ~~Assign minsky.cgl.ucsf.edu hostname for AI machine - Greg, TomG
* Setup meeting with NIH R01 program officer to discuss resubmission, Tom Ferrin
* Get certificate for https at rbvi.org. Greg
* Renew certificate for https on vr.ucsf.edu.  Greg
* Set up 2-factor authentication for hal2 vpn - (waiting to see if VPN will even be allowed by campus IT) - Scooter
* Document new vpn setup on Linux - Scooter