= Attendees = * Eric, Greg, TomG, Conrad, TomF, Elaine = Agenda = * Action items * Chimera * 1.13.1 release - catastrophic failure on protein residue with all zero coordinates * ChimeraX * [wiki:Wildcards Wildcard/regex/case matching in atomspec] (Eric) * Installers for CentOS/Redhat * RBVI bundles on toolshed * Documentation strategy * Change build process to trim down list of bundles in standard release while still testing toolshed-only bundles = Discussion = * Chimera 1.13.1. * So far so good. Let it simmer a while more. * Tristan's example from CASP entry with all zero coordinates in a residue causes Chimera to "exit abnormally" - Ignore for now * ChimeraX * Changing log behavior * Reorganize "save" command: - ~~Remove "metadata" and "verbose" from main command - ~~Move "savePath" and "forDemo" into a "log save" subcommand. ("forDemo" or "executableLinks" does not change user preference.) - ~~Move "warning" and "error" options into "log setting" (non-sticky) subcommand and add in Settings. * Try out new syntax and discuss again next week * Wildcard matching * Use file globbing syntax for atomspec wildcards, replacing the '=' in Chimera 1 with '*' since '*' should no longer appear in atom names * For attribute testing, use four operators: '=' and '~'. '=' is a string match. '==' is a case-sensitive string match. '~' is a glob match. '!~~' is a case-sensitive glob match * Installers for CentOS/Redhat - Up on web site. Tristan may be testing it soon. * Putting RBVI bundles on toolshed - Conrad showed toolshed rbvi bundle release page - Scooter says Cytoscape app store revamped recently, ChimeraX should use new Django code. - Fix "New version" section of candidate bundles - Add "make sync" to daily build - Push to production site * Documentation strategy - Current layout below - What layout do we want? - Use virtual overlay, with make target for resynchronizing symlinks ||docs||user||commands||close.html|| || || ||tools||filehistory.html|| || || ||formats||bild.html|| ||src||bundles||''bundle_name''||docs||user||commands||my_command.html|| || || || || || ||tool||my_tool.html|| || || || || || ||formats||my_format.html|| = Action Items = * Greg will implement documentation virtual overlay symlink target * Implement wildcard matching. Eric will create a ticket for Conrad. * Send announcement on Chimera mailing lists regarding Mojave fix in daily and candidate builds (Elaine and Eric) * Conrad will create ticket listing stable APIs