= Attendees = * Conrad, Elaine, Eric, TomG, Greg = Agenda = * Review action items from 8/26 meeting * Chimera 1.12 * Alpha 3 - Yet another new bundle building change - Sessions: msgpack vs pickle * Alpha 4 - Undo manager - Preferences GUI * Beta release topics * Next meeting - [http://plato.cgl.ucsf.edu/pipermail/chimera-users/2017-August/013830.html Glycosylation depiction] - Who will develop mmCIF writer? [https://plato.cgl.ucsf.edu/trac/ChimeraX/ticket/752#comment:3 ticket] - ChimeraX on Github - Rotamer library license = Discussion = * Chimera 1.12 waiting on: - turning off virus-checking does not solve "cannot rename file" issue, still waiting for info on turning off Windows indexing - ~~openssl on Linux~~, use ChimeraX approach of adding root certificate file from known system locations - ~~splash screen problem with PIL fixed - Put candidate release up now (Greg will handle branching and release notes migration, Conrad will go through svn logs for notable bug fixes) * Chimera issues - RCSB wants us to use https to wwpdb.org to fetch files * Alpha 3 - Sessions: msgpack vs pickle - Use different extension mechanism to handle tuples/lists instead of overloading map serialization and checking for special {{{ __type__ }}} key - Other custom types, e.g., DateTime, will use new extension mechanism as well - Python version is done but very slow - Working on C version for speed * Alpha 4 - Undo manager * Conrad * getting closer - Preferences GUI * Eric * Core preferences + 1 example bundle preferences * Ensure fetching URL is settable via preferences - Zone atomspec * Conrad * chains still need work, only selects polymer - Rescan tickets, in particular, findclash * Beta release topics - Why do we need a beta so soon? Why not leave it as alpha? - Is December a realistic target? - Will bundles move out from core, e.g., atomic? - What are the beta APIs? Toolshed. Atomic. Command... - How much "firming up" API is needed? - What consists of "the API"? Public methods, even those without Sphinx documentation? - Release protocol for "core" bundles? = Action Items = * Conrad will continue working on ribbon tickets * Conrad will investigate implementing the "like" operator - e.g., to specify polymer in atomspec * Scooter will investigate making tickets public (possibly marking some tickets private) * Conrad will send mail to RCSB about bad pdb.org certificate * Greg will handle Chimera 1.12 branching and release notes migration * Conrad will go through Chimera 1.12 svn logs for notable bug fixes