﻿id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
8963	QPainter::begin: Paint device returned engine == 0.  Crashed in QTabBar::paintEvent()	chimerax-bug-report@…	Tom Goddard	"{{{
The following bug report has been submitted:
Platform:        macOS-13.2.1-arm64-arm-64bit
ChimeraX Version: 1.6rc202305042315 (2023-05-04 23:15:52 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault

Thread 0x000000029672b000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 576 in _handle_results
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x000000029571f000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 528 in _handle_tasks
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x0000000294713000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/selectors.py"", line 416 in select
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/connection.py"", line 936 in wait
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 499 in _wait_for_updates
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 519 in _handle_workers
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x0000000293707000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x00000002926fb000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x00000002916ef000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x00000002906e3000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x000000028f6d7000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x000000028e6cb000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x000000028d6bf000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Thread 0x000000028c6b3000 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/multiprocessing/pool.py"", line 114 in worker
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 910 in run
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 973 in _bootstrap_inner
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/threading.py"", line 930 in _bootstrap

Current thread 0x00000001dcc38140 (most recent call first):
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/ui/gui.py"", line 275 in event_loop
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py"", line 892 in init
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/site-packages/chimerax/core/__main__.py"", line 1043 in 
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py"", line 87 in _run_code
  File ""/Applications/ChimeraX-1.6-rc2023.05.04.app/Contents/Library/Frameworks/Python.framework/Versions/3.9/lib/python3.9/runpy.py"", line 197 in _run_module_as_main


{""app_name"":""ChimeraX"",""timestamp"":""2023-05-09 10:08:39.00 +0800"",""app_version"":""1.6.0"",""slice_uuid"":""a5992708-d5b4-36ec-ac0a-e525f6105b56"",""build_version"":""1.6.0.0"",""platform"":1,""bundleID"":""edu.ucsf.cgl.ChimeraX"",""share_with_app_devs"":0,""is_first_party"":0,""bug_type"":""309"",""os_version"":""macOS 13.2.1 (22D68)"",""roots_installed"":0,""name"":""ChimeraX"",""incident_id"":""AC8377B2-132E-45D5-98AC-004680E62A10""}
{
  ""uptime"" : 15000,
  ""procRole"" : ""Background"",
  ""version"" : 2,
  ""userID"" : 501,
  ""deployVersion"" : 210,
  ""modelCode"" : ""Mac14,3"",
  ""coalitionID"" : 1199,
  ""osVersion"" : {
    ""train"" : ""macOS 13.2.1"",
    ""build"" : ""22D68"",
    ""releaseType"" : ""User""
  },
  ""captureTime"" : ""2023-05-09 10:08:23.7532 +0800"",
  ""incident"" : ""AC8377B2-132E-45D5-98AC-004680E62A10"",
  ""pid"" : 1140,
  ""translated"" : false,
  ""cpuType"" : ""ARM-64"",
  ""roots_installed"" : 0,
  ""bug_type"" : ""309"",
  ""procLaunch"" : ""2023-05-08 20:43:22.6286 +0800"",
  ""procStartAbsTime"" : 26776183583,
  ""procExitAbsTime"" : 370423355902,
  ""procName"" : ""ChimeraX"",
  ""procPath"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/MacOS\/ChimeraX"",
  ""bundleInfo"" : {""CFBundleShortVersionString"":""1.6.0"",""CFBundleVersion"":""1.6.0.0"",""CFBundleIdentifier"":""edu.ucsf.cgl.ChimeraX""},
  ""storeInfo"" : {""deviceIdentifierForVendor"":""4E7477D7-A574-5B57-8D79-A234858B461D"",""thirdParty"":true},
  ""parentProc"" : ""launchd"",
  ""parentPid"" : 1,
  ""coalitionName"" : ""edu.ucsf.cgl.ChimeraX"",
  ""crashReporterKey"" : ""0BC5BA0A-2427-1CCA-9EEF-B855C7A47417"",
  ""throttleTimeout"" : 2147483647,
  ""wakeTime"" : 1,
  ""sleepWakeUUID"" : ""5D66A283-6AF1-43F0-8800-9A07149725E4"",
  ""sip"" : ""enabled"",
  ""vmRegionInfo"" : ""0x18 is not in any region.  Bytes before following region: 105553518919656\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      UNUSED SPACE AT START\n--->  \n      MALLOC_NANO (reserved)   600018000000-600020000000 [128.0M] rw-\/rwx SM=NUL  ...(unallocated)"",
  ""exception"" : {""codes"":""0x0000000000000001, 0x0000000000000018"",""rawCodes"":[1,24],""type"":""EXC_BAD_ACCESS"",""signal"":""SIGSEGV"",""subtype"":""KERN_INVALID_ADDRESS at 0x0000000000000018""},
  ""vmregioninfo"" : ""0x18 is not in any region.  Bytes before following region: 105553518919656\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      UNUSED SPACE AT START\n--->  \n      MALLOC_NANO (reserved)   600018000000-600020000000 [128.0M] rw-\/rwx SM=NUL  ...(unallocated)"",
  ""extMods"" : {""caller"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""system"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""targeted"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""warnings"":0},
  ""faultingThread"" : 0,
  ""threads"" : 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    ""CFBundleIdentifier"" : ""com.apple.HIToolbox"",
    ""size"" : 3358720,
    ""uuid"" : ""c68fe2e2-e0f3-3caf-ada3-bcc72fba79d0"",
    ""path"" : ""\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox"",
    ""name"" : ""HIToolbox""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64"",
    ""base"" : 4307845120,
    ""CFBundleShortVersionString"" : ""3.9.11, (c) 2001-2021 Python Software Foundation."",
    ""CFBundleIdentifier"" : ""org.python.python"",
    ""size"" : 2555904,
    ""uuid"" : ""5ee765c2-b52f-3980-9781-73db1abd2bde"",
    ""path"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/Python"",
    ""name"" : ""Python"",
    ""CFBundleVersion"" : ""3.9.11""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64"",
    ""base"" : 4299685888,
    ""CFBundleShortVersionString"" : ""1.6.0"",
    ""CFBundleIdentifier"" : ""edu.ucsf.cgl.ChimeraX"",
    ""size"" : 16384,
    ""uuid"" : ""a5992708-d5b4-36ec-ac0a-e525f6105b56"",
    ""path"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/MacOS\/ChimeraX"",
    ""name"" : ""ChimeraX"",
    ""CFBundleVersion"" : ""1.6.0.0""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64e"",
    ""base"" : 6462889984,
    ""size"" : 568228,
    ""uuid"" : ""191e84f1-4b95-39c8-b253-1c1ef56c0fa8"",
    ""path"" : ""\/usr\/lib\/dyld"",
    ""name"" : ""dyld""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64"",
    ""base"" : 6172934144,
    ""size"" : 154959872,
    ""uuid"" : ""1b766dc4-2490-3425-8726-45387675bc14"",
    ""path"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore"",
    ""name"" : ""QtWebEngineCore""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64"",
    ""base"" : 4730667008,
    ""size"" : 16384,
    ""uuid"" : ""cfed1505-cef2-372b-abff-2a9183ec018e"",
    ""path"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/_queue.cpython-39-darwin.so"",
    ""name"" : ""_queue.cpython-39-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64"",
    ""base"" : 4316839936,
    ""size"" : 32768,
    ""uuid"" : ""ff7d40db-95e6-320a-b57f-faed8f2333d9"",
    ""path"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/lib-dynload\/select.cpython-39-darwin.so"",
    ""name"" : ""select.cpython-39-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""arm64"",
    ""base"" : 4418879488,
    ""size"" : 20709376,
    ""uuid"" : ""6b8373ed-7142-34ea-9b4b-9f502e8a6f33"",
    ""path"" : ""\/Applications\/ChimeraX-1.6-rc2023.05.04.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.9\/lib\/python3.9\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib"",
    ""name"" : ""libopenblas64_.0.dylib""
  },
  {
    ""size"" : 0,
    ""source"" : ""A"",
    ""base"" : 0,
    ""uuid"" : ""00000000-0000-0000-0000-000000000000""
  }
],
  ""vmSummary"" : ""ReadOnly portion of Libraries: Total=1.6G resident=0K(0%) swapped_out_or_unallocated=1.6G(100%)\nWritable regions: Total=2.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.7G(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               384K        3 \nActivity Tracing                   256K        1 \nCG backing stores                  768K        4 \nCG image                          1312K       56 \nColorSync                          592K       29 \nCoreAnimation                     1488K       74 \nCoreGraphics                        48K        3 \nCoreUI image data                 5776K       58 \nFoundation                          48K        2 \nKernel Alloc Once                   32K        1 \nMALLOC                           982.4M      745 \nMALLOC guard page                  192K       11 \nMALLOC_MEDIUM (reserved)         808.0M        8         reserved VM address space (unallocated)\nMALLOC_NANO (reserved)           256.0M        1         reserved VM address space (unallocated)\nMach message                        64K        3 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        704K       44 \nStack                            336.6M       45 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                      215.2M      347 \nVM_ALLOCATE (reserved)           128.0M        1         reserved VM address space (unallocated)\n__AUTH                            1938K      361 \n__AUTH_CONST                      24.9M      589 \n__CTF                               756        1 \n__DATA                            19.9M      723 \n__DATA_CONST                      37.8M      733 \n__DATA_DIRTY                      1984K      229 \n__FONT_DATA                        2352        1 \n__GLSLBUILTINS                    5174K        1 \n__LINKEDIT                       796.0M      142 \n__OBJC_CONST                      4758K      325 \n__OBJC_RO                         65.5M        1 \n__OBJC_RW                         1988K        1 \n__TEXT                           825.8M      753 \ndyld private memory                256K        1 \nmapped file                      522.3M       84 \nshared memory                     3280K       29 \n===========                     =======  ======= \nTOTAL                              5.0G     5415 \nTOTAL, minus reserved VM space     3.8G     5415 \n"",
  ""legacyInfo"" : {
  ""threadTriggered"" : {
    ""name"" : ""CrBrowserMain"",
    ""queue"" : ""com.apple.main-thread""
  }
},
  ""trialInfo"" : {
  ""rollouts"" : [
    {
      ""rolloutId"" : ""60186475825c62000ccf5450"",
      ""factorPackIds"" : {

      },
      ""deploymentId"" : 240000026
    },
    {
      ""rolloutId"" : ""6297d96be2c9387df974efa4"",
      ""factorPackIds"" : {

      },
      ""deploymentId"" : 240000008
    }
  ],
  ""experiments"" : [

  ]
},
  ""reportNotes"" : [
  ""dyld_process_snapshot_create_for_process failed with 5""
]
}
===== Log before crash start =====
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
You can double click a model's Name or ID in the model panel to edit those
fields  
UCSF ChimeraX version: 1.6rc202305042315 (2023-05-04)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/AAY97586.1/DYDDY_EYENEY/10-30/10DDYDDY-
> AAY97586.1-964030_ranked_9.pdb""

Chain information for 10DDYDDY-AAY97586.1-964030_ranked_9.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/AAY97586.1/DYDDY_EYENEY/30-10/30EYENEY-
> AAY97586.1-615910_ranked_11.pdb""

Chain information for 30EYENEY-AAY97586.1-615910_ranked_11.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> close #1

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/AAY97586.1/DYDDY_EYENEY/10-30/10DDYDDY-
> AAY97586.1-964030_ranked_9.pdb"" format pdb

Chain information for 10DDYDDY-AAY97586.1-964030_ranked_9.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/AZI15425.1/DPWYP/30DPWYP-AZI15425.1-807710_ranked_21.pdb""

Chain information for 30DPWYP-AZI15425.1-807710_ranked_21.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/AZI15532.1/DPWMP/30DPWMP-AZI15532.1-656810_ranked_23.pdb""

Chain information for 30DPWMP-AZI15532.1-656810_ranked_23.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/BAX64741.1/DLHWQP/30DLHWQP-BAX64741.1-823910_ranked_6.pdb""

Chain information for 30DLHWQP-BAX64741.1-823910_ranked_6.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> copy #1/A

Unknown command: sequence copy #1/A  

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_040185.1/DVIEF_DGEDF/25DGEDF-NP_040185.1-952925_ranked_19.pdb""

Chain information for 25DGEDF-NP_040185.1-952925_ranked_19.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_040519.1/DLRWAP/10DLRWAP-NP_040519.1-683830_ranked_23.pdb""

Chain information for 10DLRWAP-NP_040519.1-683830_ranked_23.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_040850.1/EGEDF_EDEF/10EGEDF-NP_040850.1-294330_ranked_1.pdb""

Chain information for 10EGEDF-NP_040850.1-294330_ranked_1.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_040918.1/DLRWQP/25DLRWQP-NP_040918.1-124625_ranked_16.pdb""

Chain information for 25DLRWQP-NP_040918.1-124625_ranked_16.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_042988.1/DHQDW_ENYDF/10-30/10DHQDW-
> NP_042988.1-321930_ranked_8.pdb""

Chain information for 10DHQDW-NP_042988.1-321930_ranked_8.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_042988.1/DHQDW_ENYDF/25-25/25ENYDF-
> NP_042988.1-497025_ranked_3.pdb""

Chain information for 25ENYDF-NP_042988.1-497025_ranked_3.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> hide #1 models

> color #2 bychain

> hide #2 models

> show #1 models

> close #2

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_042988.1/DHQDW_ENYDF/25-25/25ENYDF-
> NP_042988.1-497025_ranked_14.pdb""

Chain information for 25ENYDF-NP_042988.1-497025_ranked_14.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> hide #1 models

> color #2 bychain

> close #2

> show #1 models

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_050176.1/DPRVWVP/25-25/25DPRVWVP-
> NP_050176.1-133125_ranked_12.pdb""

Chain information for 25DPRVWVP-NP_050176.1-133125_ranked_12.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> hide #1 models

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_050176.1/DPRVWVP/30-10/30DPRVWVP-
> NP_050176.1-108610_ranked_0.pdb""

Chain information for 30DPRVWVP-NP_050176.1-108610_ranked_0.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #2 bychain

> hide #2 models

> show #1 models

> hide #1 models

> show #2 models

> show #1 models

> close #1

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 2/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/NP_536443.1/ESNNTWIP/30ESNNTWIP-NP_536443.1-289310_ranked_1.pdb""

Chain information for 30ESNNTWIP-NP_536443.1-289310_ranked_1.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding
> sites)/EEEEF_EDDY/10-30/10EEEEF-EPI_ISL_402124-ORF1a-679230_ranked_22.pdb""

Chain information for 10EEEEF-EPI_ISL_402124-ORF1a-679230_ranked_22.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding
> sites)/EEEEF_EDDY/25-25/25EEEEF-EPI_ISL_402124-ORF1a-416725_ranked_23.pdb""

Chain information for 25EEEEF-EPI_ISL_402124-ORF1a-416725_ranked_23.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> hide #1 models

> color #2 bychain

> close #1

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 2/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DDDY-EPI_ISL_402124-ORF1ab-99330_ranked_9.pdb""

Chain information for 10DDDY-EPI_ISL_402124-ORF1ab-99330_ranked_9.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DNVTDF-EPI_ISL_402124-ORF1ab-609630_ranked_7.pdb""

Chain information for 10DNVTDF-EPI_ISL_402124-ORF1ab-609630_ranked_7.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DVEW-EPI_ISL_402124-ORF1ab-560230_ranked_11.pdb""

Chain information for 10DVEW-EPI_ISL_402124-ORF1ab-560230_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/25ELEDF-EPI_ISL_402124-ORF1ab-310625_ranked_24.pdb""

Chain information for 25ELEDF-EPI_ISL_402124-ORF1ab-310625_ranked_24.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DPYEDF-EPI_ISL_402124-ORF1a-96810_ranked_20.pdb""

Chain information for 30DPYEDF-EPI_ISL_402124-ORF1a-96810_ranked_20.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_0.pdb""

Chain information for 30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_21.pdb""

Chain information for 30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_21.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30EDDY-EPI_ISL_402124-ORF1a-737310_ranked_9.pdb""

Chain information for 30EDDY-EPI_ISL_402124-ORF1a-737310_ranked_9.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_21.pdb""

Chain information for 30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_21.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DPYEDF-EPI_ISL_402124-ORF1a-96810_ranked_20.pdb""

Chain information for 30DPYEDF-EPI_ISL_402124-ORF1a-96810_ranked_20.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/25ELEDF-EPI_ISL_402124-ORF1ab-310625_ranked_24.pdb""

Chain information for 25ELEDF-EPI_ISL_402124-ORF1ab-310625_ranked_24.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DVEW-EPI_ISL_402124-ORF1ab-560230_ranked_11.pdb""

Chain information for 10DVEW-EPI_ISL_402124-ORF1ab-560230_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DNVTDF-EPI_ISL_402124-ORF1ab-609630_ranked_7.pdb""

Chain information for 10DNVTDF-EPI_ISL_402124-ORF1ab-609630_ranked_7.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_0.pdb""

Chain information for 30DWYDF-EPI_ISL_402124-ORF1ab-166810_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/30DPYEDF-EPI_ISL_402124-ORF1a-96810_ranked_20.pdb""

Chain information for 30DPYEDF-EPI_ISL_402124-ORF1a-96810_ranked_20.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/25ELEDF-EPI_ISL_402124-ORF1ab-310625_ranked_24.pdb""

Chain information for 25ELEDF-EPI_ISL_402124-ORF1ab-310625_ranked_24.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> close #1

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DVEW-EPI_ISL_402124-ORF1ab-560230_ranked_11.pdb""

Chain information for 10DVEW-EPI_ISL_402124-ORF1ab-560230_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DNVTDF-EPI_ISL_402124-ORF1ab-609630_ranked_7.pdb""

Chain information for 10DNVTDF-EPI_ISL_402124-ORF1ab-609630_ranked_7.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DDDY-EPI_ISL_402124-ORF1ab-99330_ranked_14.pdb""

Chain information for 10DDDY-EPI_ISL_402124-ORF1ab-99330_ranked_14.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SARS2_ORF1a1b (ONLY nsp3 has two binding sites)/Others but only
> one binding site/10DDDY-EPI_ISL_402124-ORF1ab-99330_ranked_14.pdb""

Chain information for 10DDDY-EPI_ISL_402124-ORF1ab-99330_ranked_14.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/SMD53709.1/DDYDLWLP/10DDYDLWLP-SMD53709.1-863330_ranked_2.pdb""

Chain information for 10DDYDLWLP-SMD53709.1-863330_ranked_2.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_073755.1/ESDDEY_ESDF/25ESDDEY-
> YP_073755.1-494925_ranked_16.pdb""

Chain information for 25ESDDEY-YP_073755.1-494925_ranked_16.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081610.1/DVSWDP/10-30/10DVSWDP-
> YP_081610.1-680830_ranked_4.pdb""

Chain information for 10DVSWDP-YP_081610.1-680830_ranked_4.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081610.1/DVSWDP/25-25/25DVSWDP-
> YP_081610.1-560825_ranked_6.pdb""

Chain information for 25DVSWDP-YP_081610.1-560825_ranked_6.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> hide #1 models

> color #2 bychain

> hide #2 models

> show #1 models

> close #1

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081610.1/DVSWDP/10-30/10DVSWDP-
> YP_081610.1-680830_ranked_14.pdb""

Chain information for 10DVSWDP-YP_081610.1-680830_ranked_14.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #1 bychain

> close #2

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/10-30/10DDEDWKP-
> YP_081619.1-918430_ranked_0.pdb""

Chain information for 10DDEDWKP-YP_081619.1-918430_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/10-30/10DDEDWKP-
> YP_081619.1-918430_ranked_2.pdb""

Chain information for 10DDEDWKP-YP_081619.1-918430_ranked_2.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> hide #1 models

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/25-25/25DDEDWKP-
> YP_081619.1-777825_ranked_3.pdb""

Chain information for 25DDEDWKP-YP_081619.1-777825_ranked_3.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #2 bychain

> close #2

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/25-25/25DDEDWKP-
> YP_081619.1-777825_ranked_5.pdb""

Chain information for 25DDEDWKP-YP_081619.1-777825_ranked_5.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #2 bychain

> hide #2 models

> show #1 models

> hide #1 models

> show #1 models

> ui tool show ""Show Sequence Viewer""

> sequence chain #1/A

Alignment identifier is 1/A  

> hide #1 models

> close #1

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/25-25/25DDEDW-
> YP_081619.1-864725_ranked_5.pdb""

Chain information for 25DDEDW-YP_081619.1-864725_ranked_5.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #1 bychain

> close #1

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/25-25/25DDEDWKP-
> YP_081619.1-777825_ranked_16.pdb""

Chain information for 25DDEDWKP-YP_081619.1-777825_ranked_16.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #1 bychain

> close #1

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_081619.1/DDEDWKP/25-25/25DDEDW-
> YP_081619.1-864725_ranked_0.pdb""

Chain information for 25DDEDW-YP_081619.1-864725_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #1 bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain #1/A

Alignment identifier is 1/A  

> ui tool show ""Show Sequence Viewer""

> sequence chain #2/A

Alignment identifier is 2/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_238482.1/DSEDDWFP/25-25/25DSEDDW-
> YP_238482.1-905225_ranked_4.pdb""

Chain information for 25DSEDDW-YP_238482.1-905225_ranked_4.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_238482.1/DSEDDWFP/30-10/30DSEDDWFP-
> YP_238482.1-952810_ranked_9.pdb""

Chain information for 30DSEDDWFP-YP_238482.1-952810_ranked_9.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_238482.1/DSEDDWFP/25-25/25DSEDDW-
> YP_238482.1-905225_ranked_3.pdb""

Chain information for 25DSEDDW-YP_238482.1-905225_ranked_3.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401644.1/DDWY_DESWDY/25-25/25DESWDY-
> YP_401644.1-60625_ranked_16.pdb""

Chain information for 25DESWDY-YP_401644.1-60625_ranked_16.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401644.1/DDWY_DESWDY/30-10/30DEDY-
> YP_401644.1-217010_ranked_11.pdb""

Chain information for 30DEDY-YP_401644.1-217010_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color byhetero

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401644.1/DDWY_DESWDY/30-10/30DEDY-
> YP_401644.1-217010_ranked_0.pdb""

Chain information for 30DEDY-YP_401644.1-217010_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401644.1/DDWY_DESWDY/30-10/30DESWDY-
> YP_401644.1-538810_ranked_11.pdb""

Chain information for 30DESWDY-YP_401644.1-538810_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> hide #1 models

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401644.1/DDWY_DESWDY/25-25/25DESWDY-
> YP_401644.1-60625_ranked_2.pdb""

Chain information for 25DESWDY-YP_401644.1-60625_ranked_2.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #2 bychain

> hide #2 models

> show #1 models

> hide #1 models

> show #2 models

> ui tool show ""Show Sequence Viewer""

> sequence chain #1/A

Alignment identifier is 1/A  

> select #1/A:2

17 atoms, 17 bonds, 1 residue, 1 model selected  

> select #1/A:2-6

72 atoms, 73 bonds, 5 residues, 1 model selected  

> close #1

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 2/A  

> select /A:42

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:42-45

60 atoms, 60 bonds, 4 residues, 1 model selected  

> select /A:26

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:26-31

95 atoms, 97 bonds, 6 residues, 1 model selected  

> select /A:13

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:13-16

69 atoms, 71 bonds, 4 residues, 1 model selected  

> select /A:42-43

27 atoms, 26 bonds, 2 residues, 1 model selected  

> select /A:42-45

60 atoms, 60 bonds, 4 residues, 1 model selected  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401644.1/DDWY_DESWDY/25-25/25DESWDY-
> YP_401644.1-60625_ranked_16.pdb""

Chain information for 25DESWDY-YP_401644.1-60625_ranked_16.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> ui tool show ""Show Sequence Viewer""

> sequence chain #2/A #1/A

Alignment identifier is 1  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401671.1/DNVPPWLP/10DNVPPWLP-YP_401671.1-114930_ranked_12.pdb""

Chain information for 10DNVPPWLP-YP_401671.1-114930_ranked_12.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401676.1/DEEF_EDGEF/25DVQREF-YP_401676.1-645825_ranked_3.pdb""

Chain information for 25DVQREF-YP_401676.1-645825_ranked_3.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_401676.1/DEEF_EDVQREF/25DEEF-YP_401676.1-107425_ranked_21.pdb""

Chain information for 25DEEF-YP_401676.1-107425_ranked_21.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129418.1/DGAWLP/10-30/10DGAWLP-
> YP_001129418.1-144430_ranked_2.pdb""

Chain information for 10DGAWLP-YP_001129418.1-144430_ranked_2.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129418.1/DGAWLP/30-10/30DGAWLP-
> YP_001129418.1-820310_ranked_4.pdb""

Chain information for 30DGAWLP-YP_001129418.1-820310_ranked_4.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129418.1/DGAWLP/10-30/10DGAWLP-
> YP_001129418.1-144430_ranked_12.pdb""

Chain information for 10DGAWLP-YP_001129418.1-144430_ranked_12.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129418.1/DGAWLP/10-30/10DGAWLP-
> YP_001129418.1-144430_ranked_7.pdb""

Chain information for 10DGAWLP-YP_001129418.1-144430_ranked_7.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129418.1/DGAWLP/10-30/10DGAWLP-
> YP_001129418.1-144430_ranked_2.pdb""

Chain information for 10DGAWLP-YP_001129418.1-144430_ranked_2.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129418.1/DGAWLP/30-10/30DGAWLP-
> YP_001129418.1-820310_ranked_0.pdb""

Chain information for 30DGAWLP-YP_001129418.1-820310_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129463.1/EGPWVP/30EGPWVP-YP_001129463.1-35910_ranked_0.pdb""

Chain information for 30EGPWVP-YP_001129463.1-35910_ranked_0.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> close #1

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001129463.1/EGPWVP/30EGPWVP-YP_001129463.1-35910_ranked_0.pdb""

Chain information for 30EGPWVP-YP_001129463.1-35910_ranked_0.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001285395.1/DDDDLWLP/25DDDDLWLP-
> YP_001285395.1-405325_ranked_18.pdb""

Chain information for 25DDDDLWLP-YP_001285395.1-405325_ranked_18.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> close #1

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 2/A  

> select /A:12

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:12-15

54 atoms, 53 bonds, 4 residues, 1 model selected  

> select /A:26

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:26-35

152 atoms, 156 bonds, 10 residues, 1 model selected  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_002213776.1/EPWMP/30EPWMP-YP_002213776.1-668410_ranked_19.pdb""

Chain information for 30EPWMP-YP_002213776.1-668410_ranked_19.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003090286.1/ESDEY_EVEREWF/10-30/10DESDEY-
> YP_003090286.1-531230_ranked_18.pdb""

Chain information for 10DESDEY-YP_003090286.1-531230_ranked_18.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003090287.1/ESDEY_EVEREWF/25-25/25EVEREW-
> YP_003090287.1-653025_ranked_6.pdb""

Chain information for 25EVEREW-YP_003090287.1-653025_ranked_6.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> hide #1 models

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003090287.1/ESDEY_EVEREWF/30-10/30EVEREW-
> YP_003090287.1-230510_ranked_16.pdb""

Chain information for 30EVEREW-YP_003090287.1-230510_ranked_16.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #2 bychain

> close #2

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003090287.1/ESDEY_EVEREWF/30-10/30EVEREW-
> YP_003090287.1-230510_ranked_19.pdb""

Chain information for 30EVEREW-YP_003090287.1-230510_ranked_19.pdb #2  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color #2 bychain

> close #2

> show #1 models

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> select /A:40

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:40-46

104 atoms, 105 bonds, 7 residues, 1 model selected  

> select /A:6

12 atoms, 11 bonds, 1 residue, 1 model selected  

> select /A:6-11

86 atoms, 86 bonds, 6 residues, 1 model selected  

> select /A:31

24 atoms, 25 bonds, 1 residue, 1 model selected  

> select /A:25-31

124 atoms, 125 bonds, 7 residues, 1 model selected  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003090287.1/ESDEY_EVEREWF/25-25/25EVEREW-
> YP_003090287.1-653025_ranked_6.pdb""

Chain information for 25EVEREW-YP_003090287.1-653025_ranked_6.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003090287.1/ESDEY_EVEREWF/30-10/30EVEREW-
> YP_003090287.1-230510_ranked_15.pdb""

Chain information for 30EVEREW-YP_003090287.1-230510_ranked_15.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_003275951.1/EAEY_EIDREWF/10ESEEY-
> YP_003275951.1-53530_ranked_23.pdb""

Chain information for 10ESEEY-YP_003275951.1-53530_ranked_23.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905855.1/EDSDEY_EAEWF/10EDSDEY-
> YP_006905855.1-747330_ranked_7.pdb""

Chain information for 10EDSDEY-YP_006905855.1-747330_ranked_7.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/10-30/10DDSEDF-
> YP_006905858.1-463730_ranked_2.pdb""

Chain information for 10DDSEDF-YP_006905858.1-463730_ranked_2.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/25-25/25DDSEDF-
> YP_006905858.1-847425_ranked_14.pdb""

Chain information for 25DDSEDF-YP_006905858.1-847425_ranked_14.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/25-25/25DDSEDF-
> YP_006905858.1-847425_ranked_12.pdb""

Chain information for 25DDSEDF-YP_006905858.1-847425_ranked_12.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bypolymer

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/25-25/25DPEDY-
> YP_006905858.1-761425_ranked_20.pdb""

Chain information for 25DPEDY-YP_006905858.1-761425_ranked_20.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/25-25/25DPEDY-
> YP_006905858.1-761425_ranked_11.pdb""

Chain information for 25DPEDY-YP_006905858.1-761425_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/30-10/30DPEDY-
> YP_006905858.1-942110_ranked_9.pdb""

Chain information for 30DPEDY-YP_006905858.1-942110_ranked_9.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_006905858.1/DDSEDF_EIEREWF/30-10/30EIEREW-
> YP_006905858.1-133410_ranked_6.pdb""

Chain information for 30EIEREW-YP_006905858.1-133410_ranked_6.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_007641404.1/DDDDLWLP/30DDDDLWLP-
> YP_007641404.1-723710_ranked_11.pdb""

Chain information for 30DDDDLWLP-YP_007641404.1-723710_ranked_11.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_009047079.1/DEEY_DIEAEW/25DIEAEW-
> YP_009047079.1-963425_ranked_21.pdb""

Chain information for 25DIEAEW-YP_009047079.1-963425_ranked_21.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

> close

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_009408406.1/DMWTP/30DMWTP-YP_009408406.1-710210_ranked_1.pdb""

Chain information for 30DMWTP-YP_009408406.1-710210_ranked_1.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  

> color bychain

> ui tool show ""Show Sequence Viewer""

> sequence chain /A

Alignment identifier is 1/A  

QPainter::begin: Paint device returned engine == 0, type: 3  


===== Log before crash end =====

Log:
UCSF ChimeraX version: 1.6rc202305042315 (2023-05-04)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open ""/Users/yangxin/Downloads/All_virus+SARS2--DEFYW with two binding sites
> or DWP/PDB/YP_001285395.1/DDDDLWLP/25DDDDLWLP-
> YP_001285395.1-405325_ranked_18.pdb""

Chain information for 25DDDDLWLP-YP_001285395.1-405325_ranked_18.pdb #1  
---  
Chain | Description  
A | No description available  
B | No description available  
  




OpenGL version: 4.1 Metal - 83
OpenGL renderer: Apple M2
OpenGL vendor: Apple

Python: 3.9.11
Locale: UTF-8
Qt version: PyQt6 6.4.2, Qt 6.4.2
Qt runtime version: 6.4.3
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: Mac mini
      Model Identifier: Mac14,3
      Model Number: MMFJ3CH/A
      Chip: Apple M2
      Total Number of Cores: 8 (4 performance and 4 efficiency)
      Memory: 8 GB
      System Firmware Version: 8419.80.7
      OS Loader Version: 8419.80.7

Software:

    System Software Overview:

      System Version: macOS 13.2.1 (22D68)
      Kernel Version: Darwin 22.3.0
      Time since boot: 1 day, 43 minutes

Graphics/Displays:

    Apple M2:

      Chipset Model: Apple M2
      Type: GPU
      Bus: Built-In
      Total Number of Cores: 10
      Vendor: Apple (0x106b)
      Metal Support: Metal 3
      Displays:
        U28P2G6B:
          Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
          UI Looks like: 1920 x 1080 @ 60.00Hz
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Rotation: Supported


Installed Packages:
    alabaster: 0.7.13
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.2.1
    Babel: 2.12.1
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    build: 0.10.0
    certifi: 2021.10.8
    cftime: 1.6.2
    charset-normalizer: 3.1.0
    ChimeraX-AddCharge: 1.5.9.1
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.3.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.9.3
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.0.3
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.43.10
    ChimeraX-AtomicLibrary: 10.0.6
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.1
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.8
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.0.2
    ChimeraX-CheckWaters: 1.3.1
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.3
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.6rc202305042315
    ChimeraX-CoreFormats: 1.1
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.1
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.1
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-Label: 1.1.7
    ChimeraX-ListInfo: 1.1.1
    ChimeraX-Log: 1.1.5
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.8.2
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.0.12
    ChimeraX-MDcrds: 2.6
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.9
    ChimeraX-ModelPanel: 1.3.7
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.0
    ChimeraX-NRRD: 1.0
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.10.1
    ChimeraX-PDB: 2.7.2
    ChimeraX-PDBBio: 1.0
    ChimeraX-PDBLibrary: 1.0.2
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.1
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.1
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 3.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.1
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.8.3
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.1
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.10.3
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.1
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.1
    ChimeraX-Topography: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.28.4
    ChimeraX-uniprot: 2.2.2
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.1
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.1.3
    contourpy: 1.0.7
    cxservices: 1.2.2
    cycler: 0.11.0
    Cython: 0.29.33
    debugpy: 1.6.7
    decorator: 5.1.1
    docutils: 0.19
    executing: 1.2.0
    filelock: 3.9.0
    fonttools: 4.39.3
    funcparserlib: 1.0.1
    grako: 3.16.5
    h5py: 3.8.0
    html2text: 2020.1.16
    idna: 3.4
    ihm: 0.35
    imagecodecs: 2022.2.22
    imagesize: 1.4.1
    importlib-metadata: 6.6.0
    ipykernel: 6.21.1
    ipython: 8.10.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.0.6
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.0.2
    jupyter-core: 5.3.0
    jupyterlab-widgets: 3.0.7
    kiwisolver: 1.4.4
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.2
    matplotlib: 3.6.3
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.5.6
    netCDF4: 1.6.2
    networkx: 2.8.8
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.4
    numpy: 1.23.5
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.8.0
    pickleshare: 0.7.5
    Pillow: 9.3.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 3.5.0
    prompt-toolkit: 3.0.38
    psutil: 5.9.4
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.14.0
    pynrrd: 1.0.0
    PyOpenGL: 3.1.5
    PyOpenGL-accelerate: 3.1.5
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.4.2
    PyQt6-Qt6: 6.4.3
    PyQt6-sip: 13.4.1
    PyQt6-WebEngine-commercial: 6.4.0
    PyQt6-WebEngine-Qt6: 6.4.3
    python-dateutil: 2.8.2
    pytz: 2023.3
    pyzmq: 25.0.2
    qtconsole: 5.4.0
    QtPy: 2.3.1
    RandomWords: 0.4.0
    requests: 2.28.2
    scipy: 1.9.3
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.4.1
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.4
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.2
    sphinxcontrib-htmlhelp: 2.0.1
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.3
    sphinxcontrib-serializinghtml: 1.1.5
    stack-data: 0.6.2
    tables: 3.7.0
    tcia-utils: 1.2.0
    tifffile: 2022.10.10
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.3.1
    traitlets: 5.9.0
    typing-extensions: 4.5.0
    tzdata: 2023.3
    urllib3: 1.26.15
    wcwidth: 0.2.6
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.7
    zipp: 3.15.0

}}}
"	defect	closed	normal		Window Toolkit		can't reproduce		Eric Pettersen				all	ChimeraX
