id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 4172 Crash activating timers jjung@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: Darwin-18.7.0-x86_64-i386-64bit ChimeraX Version: 0.9 (2019-02-08) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Process: ChimeraX [69872] Path: /Applications/ChimeraX.app/Contents/MacOS/ChimeraX Identifier: edu.ucsf.cgl.ChimeraX Version: 0.9.0 (0.9.0.0) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [69872] User ID: 501 Date/Time: 2021-01-26 20:02:32.547 +0100 OS Version: Mac OS X 10.14.6 (18G7016) Report Version: 12 Bridge OS Version: 5.1 (18P3030) Anonymous UUID: D42ACE80-570C-3A90-F156-A0393722D547 Sleep/Wake UUID: 164305C1-4335-4CB0-8D97-A5B368852C1A Time Awake Since Boot: 560000 seconds Time Since Wake: 250000 seconds System Integrity Protection: enabled Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: KERN_INVALID_ADDRESS at 0x000000007fff490b Exception Note: EXC_CORPSE_NOTIFY VM Regions Near 0x7fff490b: --> __TEXT 0000000101e9c000-0000000101e9d000 [ 4K] r-x/rwx SM=COW /Applications/ChimeraX.app/Contents/MacOS/ChimeraX Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff775fb2c2 __pthread_kill + 10 1 libsystem_pthread.dylib 0x00007fff776b6bf1 pthread_kill + 284 2 libsystem_c.dylib 0x00007fff77518d8a raise + 26 3 libsystem_platform.dylib 0x00007fff776abb5d _sigtramp + 29 4 ??? 000000000000000000 0 + 0 5 QtCore 0x0000000117430b1a QTimerInfoList::activateTimers() + 890 6 libqcocoa.dylib 0x000000011fca0862 0x11fc7a000 + 157794 7 com.apple.CoreFoundation 0x00007fff4b533d13 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE0_PERFORM_FUNCTION__ + 17 8 com.apple.CoreFoundation 0x00007fff4b533cb9 __CFRunLoopDoSource0 + 108 9 com.apple.CoreFoundation 0x00007fff4b5175af __CFRunLoopDoSources0 + 195 10 com.apple.CoreFoundation 0x00007fff4b516b79 __CFRunLoopRun + 1189 11 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 12 com.apple.HIToolbox 0x00007fff4a7751ab RunCurrentEventLoopInMode + 292 13 com.apple.HIToolbox 0x00007fff4a774ee5 ReceiveNextEventCommon + 603 14 com.apple.HIToolbox 0x00007fff4a774c76 _BlockUntilNextEventMatchingListInModeWithFilter + 64 15 com.apple.AppKit 0x00007fff48b0c77d _DPSNextEvent + 1135 16 com.apple.AppKit 0x00007fff48b0b46b -[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:] + 1361 17 com.apple.AppKit 0x00007fff48b05588 -[NSApplication run] + 699 18 libqcocoa.dylib 0x000000011fca153d 0x11fc7a000 + 161085 19 QtCore 0x00000001173d6742 QEventLoop::exec(QFlags) + 418 20 QtCore 0x00000001173db172 QCoreApplication::exec() + 402 21 QtWidgets.so 0x0000000116417dc2 meth_QApplication_exec_(_object*, _object*) + 82 22 org.python.python 0x0000000101ec33ab _PyMethodDef_RawFastCallKeywords + 251 23 org.python.python 0x0000000101ec293c _PyCFunction_FastCallKeywords + 44 24 org.python.python 0x0000000101f8c209 call_function + 617 25 org.python.python 0x0000000101f848da _PyEval_EvalFrameDefault + 5562 26 org.python.python 0x0000000101ec2df3 function_code_fastcall + 195 27 org.python.python 0x0000000101f8c271 call_function + 721 28 org.python.python 0x0000000101f848da _PyEval_EvalFrameDefault + 5562 29 org.python.python 0x0000000101f8ce81 _PyEval_EvalCodeWithName + 2721 30 org.python.python 0x0000000101ec28f6 _PyFunction_FastCallKeywords + 230 31 org.python.python 0x0000000101f8c271 call_function + 721 32 org.python.python 0x0000000101f8496b _PyEval_EvalFrameDefault + 5707 33 org.python.python 0x0000000101f8ce81 _PyEval_EvalCodeWithName + 2721 34 org.python.python 0x0000000101f83280 PyEval_EvalCode + 48 35 org.python.python 0x0000000101f809c3 builtin_exec + 563 36 org.python.python 0x0000000101ec355e _PyMethodDef_RawFastCallKeywords + 686 37 org.python.python 0x0000000101ec293c _PyCFunction_FastCallKeywords + 44 38 org.python.python 0x0000000101f8c209 call_function + 617 39 org.python.python 0x0000000101f8496b _PyEval_EvalFrameDefault + 5707 40 org.python.python 0x0000000101f8ce81 _PyEval_EvalCodeWithName + 2721 41 org.python.python 0x0000000101ec28f6 _PyFunction_FastCallKeywords + 230 42 org.python.python 0x0000000101f8c271 call_function + 721 43 org.python.python 0x0000000101f8496b _PyEval_EvalFrameDefault + 5707 44 org.python.python 0x0000000101f8ce81 _PyEval_EvalCodeWithName + 2721 45 org.python.python 0x0000000101ec23d2 _PyFunction_FastCallDict + 450 46 org.python.python 0x0000000101fe14c3 pymain_run_module + 147 47 org.python.python 0x0000000101fe02d6 pymain_main + 4262 48 org.python.python 0x0000000101fdf223 Py_Main + 51 49 edu.ucsf.cgl.ChimeraX 0x0000000101e9ce16 main + 278 50 libdyld.dylib 0x00007fff774c03d5 start + 1 Thread 1:: com.apple.NSEventThread 0 libsystem_platform.dylib 0x00007fff776a8db0 _platform_memmove$VARIANT$Haswell + 240 1 com.apple.SkyLight 0x00007fff706d1f5b CGSSnarfAndDispatchDatagrams + 951 2 com.apple.SkyLight 0x00007fff70926f2e SLSGetNextEventRecordInternal + 81 3 com.apple.SkyLight 0x00007fff707dc1be SLEventCreateNextEvent + 136 4 com.apple.HIToolbox 0x00007fff4a77f162 PullEventsFromWindowServerOnConnection(unsigned int, unsigned char, __CFMachPortBoost*) + 45 5 com.apple.HIToolbox 0x00007fff4a77f0f9 MessageHandler(__CFMachPort*, void*, long, void*) + 51 6 com.apple.CoreFoundation 0x00007fff4b52f329 __CFMachPortPerform + 246 7 com.apple.CoreFoundation 0x00007fff4b52f227 __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE1_PERFORM_FUNCTION__ + 41 8 com.apple.CoreFoundation 0x00007fff4b52f185 __CFRunLoopDoSource1 + 527 9 com.apple.CoreFoundation 0x00007fff4b5170b0 __CFRunLoopRun + 2524 10 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 11 com.apple.AppKit 0x00007fff48b144a2 _NSEventThread + 175 12 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 13 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 14 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 2:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff775fd36a poll + 10 1 QtCore 0x000000011742db40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544 2 QtCore 0x000000011742f1b9 QEventDispatcherUNIX::processEvents(QFlags) + 857 3 QtCore 0x00000001173d6742 QEventLoop::exec(QFlags) + 418 4 QtWebEngineCore 0x0000000117f70c4a 0x117f4f000 + 138314 5 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 6 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 7 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 8 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 9 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 10 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 11 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 3:: DnsConfigService 0 libsystem_kernel.dylib 0x00007fff775fb78a kevent + 10 1 QtWebEngineCore 0x000000011907d469 0x117f4f000 + 18015337 2 QtWebEngineCore 0x000000011907a75d 0x117f4f000 + 18003805 3 QtWebEngineCore 0x0000000118b6e99f 0x117f4f000 + 12712351 4 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 5 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 6 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 7 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 8 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 9 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 10 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 4:: WorkerPool/58631 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b75a1 _pthread_cond_wait + 773 2 QtWebEngineCore 0x0000000118ba82bb 0x117f4f000 + 12948155 3 QtWebEngineCore 0x0000000118bc66e9 0x117f4f000 + 13072105 4 QtWebEngineCore 0x0000000118bc6c57 0x117f4f000 + 13073495 5 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 6 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 8 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 5:: WorkerPool/58887 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b75a1 _pthread_cond_wait + 773 2 QtWebEngineCore 0x0000000118ba82bb 0x117f4f000 + 12948155 3 QtWebEngineCore 0x0000000118bc66e9 0x117f4f000 + 13072105 4 QtWebEngineCore 0x0000000118bc6c57 0x117f4f000 + 13073495 5 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 6 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 8 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 6:: Chrome_DBThread 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x000000011823c958 0x117f4f000 + 3070296 10 QtWebEngineCore 0x000000011823cd1f 0x117f4f000 + 3071263 11 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 12 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 13 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 14 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 15 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 7:: Chrome_FileThread 0 libsystem_kernel.dylib 0x00007fff775fb78a kevent + 10 1 QtWebEngineCore 0x000000011907d469 0x117f4f000 + 18015337 2 QtWebEngineCore 0x000000011907a75d 0x117f4f000 + 18003805 3 QtWebEngineCore 0x0000000118b6e99f 0x117f4f000 + 12712351 4 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 5 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 6 QtWebEngineCore 0x000000011823c9d8 0x117f4f000 + 3070424 7 QtWebEngineCore 0x000000011823cd2f 0x117f4f000 + 3071279 8 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 9 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 10 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 11 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 12 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 8:: Chrome_FileUserBlockingThread 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x000000011823ca58 0x117f4f000 + 3070552 10 QtWebEngineCore 0x000000011823cd3f 0x117f4f000 + 3071295 11 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 12 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 13 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 14 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 15 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 9:: Chrome_ProcessLauncherThread 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x000000011823cad8 0x117f4f000 + 3070680 10 QtWebEngineCore 0x000000011823cd4c 0x117f4f000 + 3071308 11 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 12 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 13 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 14 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 15 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 10:: Chrome_CacheThread 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x000000011823cb58 0x117f4f000 + 3070808 10 QtWebEngineCore 0x000000011823cd59 0x117f4f000 + 3071321 11 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 12 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 13 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 14 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 15 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 11:: Chrome_IOThread 0 libsystem_kernel.dylib 0x00007fff775fb78a kevent + 10 1 QtWebEngineCore 0x000000011907d469 0x117f4f000 + 18015337 2 QtWebEngineCore 0x000000011907a75d 0x117f4f000 + 18003805 3 QtWebEngineCore 0x0000000118b6e99f 0x117f4f000 + 12712351 4 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 5 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 6 QtWebEngineCore 0x000000011823cbd8 0x117f4f000 + 3070936 7 QtWebEngineCore 0x000000011823cd66 0x117f4f000 + 3071334 8 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 9 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 10 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 11 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 12 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 12:: IndexedDB 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 10 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 11 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 12 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 13 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 13:: BrowserBlockingWorker1/90115 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 QtWebEngineCore 0x0000000118bbec1f 0x117f4f000 + 13040671 3 QtWebEngineCore 0x0000000118bbe2e6 0x117f4f000 + 13038310 4 QtWebEngineCore 0x0000000118bc218d 0x117f4f000 + 13054349 5 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 6 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 8 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 14:: CompositorTileWorker1/90371 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 QtWebEngineCore 0x000000011975dcf8 0x117f4f000 + 25226488 3 QtWebEngineCore 0x0000000118bc218d 0x117f4f000 + 13054349 4 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 5 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 6 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 7 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 15:: AudioThread 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 10 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 11 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 12 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 13 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 16:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff775f521a mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff775f5768 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff4b5177b2 __CFRunLoopServiceMachPort + 328 3 com.apple.CoreFoundation 0x00007fff4b516d20 __CFRunLoopRun + 1612 4 com.apple.CoreFoundation 0x00007fff4b516482 CFRunLoopRunSpecific + 455 5 QtWebEngineCore 0x0000000118b6f90f 0x117f4f000 + 12716303 6 QtWebEngineCore 0x0000000118b6f2a4 0x117f4f000 + 12714660 7 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 8 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 9 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 10 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 11 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 12 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 13 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 17:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff775fb78a kevent + 10 1 QtWebEngineCore 0x000000011907d469 0x117f4f000 + 18015337 2 QtWebEngineCore 0x000000011907a75d 0x117f4f000 + 18003805 3 QtWebEngineCore 0x0000000118b6e99f 0x117f4f000 + 12712351 4 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 5 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 6 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 7 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 8 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 9 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 10 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 18:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff775fd36a poll + 10 1 QtCore 0x000000011742db40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544 2 QtCore 0x000000011742f1b9 QEventDispatcherUNIX::processEvents(QFlags) + 857 3 QtCore 0x00000001173d6742 QEventLoop::exec(QFlags) + 418 4 QtWebEngineCore 0x0000000117f70c4a 0x117f4f000 + 138314 5 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 6 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 7 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 8 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 9 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 10 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 11 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 19:: QFileInfoGatherer 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 QtCore 0x000000011721c58b 0x1171ef000 + 185739 3 QtCore 0x000000011721c522 QWaitCondition::wait(QMutex*, unsigned long) + 162 4 QtWidgets 0x000000011697d862 0x116746000 + 2324578 5 QtCore 0x000000011721afbf 0x1171ef000 + 180159 6 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 7 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 8 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 20:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff775fd36a poll + 10 1 QtCore 0x000000011742db40 qt_safe_poll(pollfd*, unsigned int, timespec const*) + 544 2 QtCore 0x000000011742f1b9 QEventDispatcherUNIX::processEvents(QFlags) + 857 3 QtCore 0x00000001173d6742 QEventLoop::exec(QFlags) + 418 4 QtWebEngineCore 0x0000000117f70c4a 0x117f4f000 + 138314 5 QtWebEngineCore 0x0000000118b6c10e 0x117f4f000 + 12701966 6 QtWebEngineCore 0x0000000118b90531 0x117f4f000 + 12850481 7 QtWebEngineCore 0x0000000118bc436b 0x117f4f000 + 13063019 8 QtWebEngineCore 0x0000000118bbd667 0x117f4f000 + 13035111 9 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 10 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 11 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 21: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 22: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 23: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 24: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 25: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 26: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 27: 0 libsystem_kernel.dylib 0x00007fff775f8866 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff776b756e _pthread_cond_wait + 722 2 libopenblasp-r0.3.5.dev.dylib 0x0000000102da2a3b blas_thread_server + 619 3 libsystem_pthread.dylib 0x00007fff776b42eb _pthread_body + 126 4 libsystem_pthread.dylib 0x00007fff776b7249 _pthread_start + 66 5 libsystem_pthread.dylib 0x00007fff776b340d thread_start + 13 Thread 28: 0 libsystem_pthread.dylib 0x00007fff776b33f0 start_wqthread + 0 Thread 29: 0 libsystem_pthread.dylib 0x00007fff776b33f0 start_wqthread + 0 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x00000001097a15c0 rcx: 0x000000010231ca48 rdx: 0x0000000000000000 rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x000000010231ca80 rsp: 0x000000010231ca48 r8: 0x000000010231cf48 r9: 0x154a0e94640dd6aa r10: 0x00000001097a166c r11: 0x0000000000000287 r12: 0x0000000000000307 r13: 0x0000000000000000 r14: 0x000000000000000b r15: 0x000000000000002d rip: 0x00007fff775fb2c2 rfl: 0x0000000000000286 cr2: 0x00000001020eb284 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Binary Images: 0x101e9c000 - 0x101e9cff3 +edu.ucsf.cgl.ChimeraX (0.9.0 - 0.9.0.0) /Applications/ChimeraX.app/Contents/MacOS/ChimeraX 0x101ea2000 - 0x102087fff +org.python.python (3.7.2, [c] 2001-2018 Python Software Foundation. - 3.7.2) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/Python 0x10245e000 - 0x10245effb +_mac_util.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/_mac_util.so 0x1024a2000 - 0x1024a3ff7 +_heapq.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_heapq.cpython-37m-darwin.so 0x1026c9000 - 0x1026c9fff +_bisect.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bisect.cpython-37m-darwin.so 0x1026cc000 - 0x1026d0ff7 +math.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/math.cpython-37m-darwin.so 0x102717000 - 0x10295eff7 +_multiarray_umath.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/core/_multiarray_umath.cpython-37m-darwin.so 0x102a6c000 - 0x1064db50f +libopenblasp-r0.3.5.dev.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libopenblasp-r0.3.5.dev.dylib 0x10671a000 - 0x106831ff7 +libgfortran.3.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libgfortran.3.dylib 0x106895000 - 0x1068cbfff +libquadmath.0.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libquadmath.0.dylib 0x1068da000 - 0x1068efff7 +libgcc_s.1.dylib (0) /Applications/ChimeraX.app/Contents/lib/python3.7/site-packages/numpy/.dylibs/libgcc_s.1.dylib 0x108951000 - 0x10895fffb +_datetime.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_datetime.cpython-37m-darwin.so 0x1089eb000 - 0x1089fcfff +_ctypes.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ctypes.cpython-37m-darwin.so 0x108a0d000 - 0x108a11ff7 +_struct.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_struct.cpython-37m-darwin.so 0x108a9b000 - 0x108aadfff +_pickle.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_pickle.cpython-37m-darwin.so 0x108b67000 - 0x108b74ff7 +_multiarray_tests.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/core/_multiarray_tests.cpython-37m-darwin.so 0x108bc3000 - 0x108bc4ff7 +lapack_lite.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/linalg/lapack_lite.cpython-37m-darwin.so 0x108bc8000 - 0x108be1fff +_umath_linalg.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/linalg/_umath_linalg.cpython-37m-darwin.so 0x108c80000 - 0x108c83ff3 +zlib.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/zlib.cpython-37m-darwin.so 0x108c89000 - 0x108c9dff7 +libz.1.2.11.dylib (0) /Applications/ChimeraX.app/Contents/lib/libz.1.2.11.dylib 0x108ce1000 - 0x108ce2ff7 +_bz2.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_bz2.cpython-37m-darwin.so 0x108ce6000 - 0x108ce6ff7 +grp.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/grp.cpython-37m-darwin.so 0x108d29000 - 0x108d61ff3 +_decimal.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_decimal.cpython-37m-darwin.so 0x108d80000 - 0x108d89fff +fftpack_lite.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/fft/fftpack_lite.cpython-37m-darwin.so 0x108e5e000 - 0x108f0dfff +mtrand.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numpy/random/mtrand.cpython-37m-darwin.so 0x10912b000 - 0x10912dfff +_hashlib.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_hashlib.cpython-37m-darwin.so 0x109132000 - 0x10918eff7 +libssl.1.1.dylib (0) /Applications/ChimeraX.app/Contents/lib/libssl.1.1.dylib 0x1091b7000 - 0x109399efb +libcrypto.1.1.dylib (0) /Applications/ChimeraX.app/Contents/lib/libcrypto.1.1.dylib 0x109428000 - 0x10942effb +_blake2.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_blake2.cpython-37m-darwin.so 0x109433000 - 0x109443ff7 +_sha3.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_sha3.cpython-37m-darwin.so 0x109449000 - 0x10944aff7 +_random.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_random.cpython-37m-darwin.so 0x10944e000 - 0x109454fff +_json.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_json.cpython-37m-darwin.so 0x109519000 - 0x109526ff7 +_ssl.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_ssl.cpython-37m-darwin.so 0x109537000 - 0x109540fff +_socket.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_socket.cpython-37m-darwin.so 0x10954d000 - 0x10954fff3 +select.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/select.cpython-37m-darwin.so 0x109555000 - 0x109558ff7 +binascii.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/binascii.cpython-37m-darwin.so 0x10965c000 - 0x10965cffb +_scproxy.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_scproxy.cpython-37m-darwin.so 0x10969f000 - 0x1096cafff +pyexpat.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/pyexpat.cpython-37m-darwin.so 0x1096dd000 - 0x1096deff3 +_queue.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_queue.cpython-37m-darwin.so 0x1096e2000 - 0x1096e3fff +_posixsubprocess.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_posixsubprocess.cpython-37m-darwin.so 0x1096e7000 - 0x1096eaff3 +_csv.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/lib-dynload/_csv.cpython-37m-darwin.so 0x1096f0000 - 0x1096f1ffb 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/Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.3b1-py3.7-macosx-10.9-x86_64.egg/OpenGL_accelerate/arraydatatype.cpython-37m-darwin.so 0x1159e4000 - 0x115a1afff +wrapper.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.3b1-py3.7-macosx-10.9-x86_64.egg/OpenGL_accelerate/wrapper.cpython-37m-darwin.so 0x115a79000 - 0x115a81ff3 +formathandler.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.3b1-py3.7-macosx-10.9-x86_64.egg/OpenGL_accelerate/formathandler.cpython-37m-darwin.so 0x115a8c000 - 0x115a93fff +latebind.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.3b1-py3.7-macosx-10.9-x86_64.egg/OpenGL_accelerate/latebind.cpython-37m-darwin.so 0x115f71000 - 0x115f8bff3 +vbo.cpython-37m-darwin.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyOpenGL_accelerate-3.1.3b1-py3.7-macosx-10.9-x86_64.egg/OpenGL_accelerate/vbo.cpython-37m-darwin.so 0x115fe7000 - 0x116001ff7 +_geometry.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/chimerax/core/geometry/_geometry.so 0x11600b000 - 0x1160cafff +libarrays.dylib (0) /Applications/ChimeraX.app/Contents/lib/libarrays.dylib 0x1161e8000 - 0x11646affb +QtWidgets.so (0) /Applications/ChimeraX.app/Contents/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/PyQt5/QtWidgets.so 0x116746000 - 0x116b96ff7 +QtWidgets 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0x7fff75077ff7 libgermantok.dylib (17.15.2) /usr/lib/libgermantok.dylib 0x7fff75078000 - 0x7fff7507dff7 libheimdal-asn1.dylib (520.270.1) /usr/lib/libheimdal-asn1.dylib 0x7fff750a8000 - 0x7fff75198fff libiconv.2.dylib (51.200.6) /usr/lib/libiconv.2.dylib 0x7fff75199000 - 0x7fff753faffb libicucore.A.dylib (62141.0.1) /usr/lib/libicucore.A.dylib 0x7fff75447000 - 0x7fff75448fff liblangid.dylib (128.15.1) /usr/lib/liblangid.dylib 0x7fff75449000 - 0x7fff75461ff3 liblzma.5.dylib (10.200.3) /usr/lib/liblzma.5.dylib 0x7fff75479000 - 0x7fff7551dff7 libmecab.1.0.0.dylib (779.24.1) /usr/lib/libmecab.1.0.0.dylib 0x7fff7551e000 - 0x7fff75722fff libmecabra.dylib (779.24.1) /usr/lib/libmecabra.dylib 0x7fff758fa000 - 0x7fff75c4bff7 libnetwork.dylib (1229.250.15) /usr/lib/libnetwork.dylib 0x7fff75cdd000 - 0x7fff76462fdf libobjc.A.dylib (756.2) /usr/lib/libobjc.A.dylib 0x7fff76474000 - 0x7fff76478ffb libpam.2.dylib (22.200.1) /usr/lib/libpam.2.dylib 0x7fff7647b000 - 0x7fff764b0fff libpcap.A.dylib (79.250.3) /usr/lib/libpcap.A.dylib 0x7fff765c9000 - 0x7fff765e1ffb libresolv.9.dylib (65.200.3) /usr/lib/libresolv.9.dylib 0x7fff765e3000 - 0x7fff7661eff3 libsandbox.1.dylib (851.270.5) /usr/lib/libsandbox.1.dylib 0x7fff7661f000 - 0x7fff76631ff7 libsasl2.2.dylib (211.1) /usr/lib/libsasl2.2.dylib 0x7fff76632000 - 0x7fff76633ff7 libspindump.dylib (267.3) /usr/lib/libspindump.dylib 0x7fff76634000 - 0x7fff76811fff libsqlite3.dylib (274.26) /usr/lib/libsqlite3.dylib 0x7fff76980000 - 0x7fff769b0ffb libtidy.A.dylib (16.5) /usr/lib/libtidy.A.dylib 0x7fff76a2a000 - 0x7fff76a2dff7 libutil.dylib (51.200.4) /usr/lib/libutil.dylib 0x7fff76a2e000 - 0x7fff76a3bfff libxar.1.dylib (417.1) /usr/lib/libxar.1.dylib 0x7fff76a40000 - 0x7fff76b23fff libxml2.2.dylib (32.18) /usr/lib/libxml2.2.dylib 0x7fff76b24000 - 0x7fff76b4cff3 libxslt.1.dylib (16.7) /usr/lib/libxslt.1.dylib 0x7fff76b4d000 - 0x7fff76b5fff7 libz.1.dylib (70.200.4) /usr/lib/libz.1.dylib 0x7fff77343000 - 0x7fff77347ff3 libcache.dylib (81) /usr/lib/system/libcache.dylib 0x7fff77348000 - 0x7fff77352ff3 libcommonCrypto.dylib (60118.250.2) /usr/lib/system/libcommonCrypto.dylib 0x7fff77353000 - 0x7fff7735aff7 libcompiler_rt.dylib (63.4) /usr/lib/system/libcompiler_rt.dylib 0x7fff7735b000 - 0x7fff77364ff7 libcopyfile.dylib (146.250.1) /usr/lib/system/libcopyfile.dylib 0x7fff77365000 - 0x7fff773e9fc3 libcorecrypto.dylib (602.260.2) /usr/lib/system/libcorecrypto.dylib 0x7fff77470000 - 0x7fff774a9ff7 libdispatch.dylib (1008.270.1) /usr/lib/system/libdispatch.dylib 0x7fff774aa000 - 0x7fff774d6ff7 libdyld.dylib (655.1.1) /usr/lib/system/libdyld.dylib 0x7fff774d7000 - 0x7fff774d7ffb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib 0x7fff774d8000 - 0x7fff774e4ff3 libkxld.dylib (4903.278.51) /usr/lib/system/libkxld.dylib 0x7fff774e5000 - 0x7fff774e5ff7 liblaunch.dylib (1336.261.6) /usr/lib/system/liblaunch.dylib 0x7fff774e6000 - 0x7fff774ebfff libmacho.dylib (927.0.3) /usr/lib/system/libmacho.dylib 0x7fff774ec000 - 0x7fff774eeff7 libquarantine.dylib (86.270.1) /usr/lib/system/libquarantine.dylib 0x7fff774ef000 - 0x7fff774f0ff7 libremovefile.dylib (45.200.2) /usr/lib/system/libremovefile.dylib 0x7fff774f1000 - 0x7fff77508ff3 libsystem_asl.dylib (356.200.4) /usr/lib/system/libsystem_asl.dylib 0x7fff77509000 - 0x7fff77509ff7 libsystem_blocks.dylib (73) /usr/lib/system/libsystem_blocks.dylib 0x7fff7750a000 - 0x7fff77591fff libsystem_c.dylib (1272.250.1) /usr/lib/system/libsystem_c.dylib 0x7fff77592000 - 0x7fff77595ffb libsystem_configuration.dylib (963.270.3) /usr/lib/system/libsystem_configuration.dylib 0x7fff77596000 - 0x7fff77599ff7 libsystem_coreservices.dylib (66) /usr/lib/system/libsystem_coreservices.dylib 0x7fff7759a000 - 0x7fff775a0fff libsystem_darwin.dylib (1272.250.1) /usr/lib/system/libsystem_darwin.dylib 0x7fff775a1000 - 0x7fff775a7ffb libsystem_dnssd.dylib (878.270.3) /usr/lib/system/libsystem_dnssd.dylib 0x7fff775a8000 - 0x7fff775f3ffb libsystem_info.dylib (517.200.9) /usr/lib/system/libsystem_info.dylib 0x7fff775f4000 - 0x7fff7761cff7 libsystem_kernel.dylib (4903.278.51) /usr/lib/system/libsystem_kernel.dylib 0x7fff7761d000 - 0x7fff77668ff7 libsystem_m.dylib (3158.200.7) /usr/lib/system/libsystem_m.dylib 0x7fff77669000 - 0x7fff77693fff libsystem_malloc.dylib (166.270.1) /usr/lib/system/libsystem_malloc.dylib 0x7fff77694000 - 0x7fff7769eff7 libsystem_networkextension.dylib (767.250.2) /usr/lib/system/libsystem_networkextension.dylib 0x7fff7769f000 - 0x7fff776a6fff libsystem_notify.dylib (172.200.21) /usr/lib/system/libsystem_notify.dylib 0x7fff776a7000 - 0x7fff776b0fef libsystem_platform.dylib (177.270.1) /usr/lib/system/libsystem_platform.dylib 0x7fff776b1000 - 0x7fff776bbff7 libsystem_pthread.dylib (330.250.2) /usr/lib/system/libsystem_pthread.dylib 0x7fff776bc000 - 0x7fff776bfff7 libsystem_sandbox.dylib (851.270.5) /usr/lib/system/libsystem_sandbox.dylib 0x7fff776c0000 - 0x7fff776c2ff3 libsystem_secinit.dylib (30.260.2) /usr/lib/system/libsystem_secinit.dylib 0x7fff776c3000 - 0x7fff776caff3 libsystem_symptoms.dylib (820.267.2) /usr/lib/system/libsystem_symptoms.dylib 0x7fff776cb000 - 0x7fff776e0ff7 libsystem_trace.dylib (906.260.3) /usr/lib/system/libsystem_trace.dylib 0x7fff776e2000 - 0x7fff776e7ffb libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib 0x7fff776e8000 - 0x7fff77717fff libxpc.dylib (1336.261.6) /usr/lib/system/libxpc.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 1 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 478144 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=746.1M resident=0K(0%) swapped_out_or_unallocated=746.1M(100%) Writable regions: Total=1.7G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=1.7G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 640K 5 Activity Tracing 256K 1 CG backing stores 28.8M 16 CG image 1076K 33 CoreAnimation 12.1M 60 CoreGraphics 8K 1 CoreImage 92K 14 CoreUI image data 3740K 41 CoreUI image file 372K 7 Foundation 24K 2 Kernel Alloc Once 8K 1 MALLOC 908.7M 236 MALLOC guard page 32K 8 MALLOC_LARGE (reserved) 384K 1 reserved VM address space (unallocated) MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated) Memory Tag 242 12K 1 OpenGL GLSL 512K 6 STACK GUARD 116K 29 Stack 157.7M 30 Stack Guard 56.0M 1 VM_ALLOCATE 196.8M 172 VM_ALLOCATE (reserved) 160.0M 2 reserved VM address space (unallocated) __DATA 89.1M 503 __FONT_DATA 4K 1 __GLSLBUILTINS 5176K 1 __LINKEDIT 240.6M 119 __TEXT 505.5M 476 __UNICODE 564K 1 mapped file 107.6M 53 shared memory 7476K 19 =========== ======= ======= TOTAL 2.7G 1841 TOTAL, minus reserved VM space 2.3G 1841 Log: UCSF ChimeraX version: 0.9 (2019-02-08) © 2016-2019 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /Users/Mac/Desktop/run_it050_class001.mrc Opened run_it050_class001.mrc, grid size 300,300,300, pixel 1.06, shown at level -3.19e-06, step 2, values float32 > open /Users/Mac/Desktop/run_it050_class002.mrc Opened run_it050_class002.mrc, grid size 300,300,300, pixel 1.06, shown at level -1.54e-06, step 2, values float32 > set bgColor white > lighting soft OpenGL version: 4.1 ATI-2.11.23 OpenGL renderer: AMD Radeon Pro 560X OpenGL Engine OpenGL vendor: ATI Technologies Inc. }}} " defect closed normal Window Toolkit can't reproduce Tom Goddard all ChimeraX