id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 20868 Crash in NSAccessibility routines in Qt 6.10.2 chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-15.7.9-arm64-arm-64bit-Mach-O ChimeraX Version: 1.13.dev202608172052 (2026-08-17 20:52:46 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Fatal Python error: Segmentation fault Current thread 0x00000001f2df22c0 [CrBrowserMain] (most recent call first): File ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/chimerax/ui/gui.py"", line 434 in event_loop File ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/chimerax/core/__main__.py"", line 1075 in init File ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/chimerax/core/__main__.py"", line 1240 in File """", line 88 in _run_code File """", line 203 in _run_module_as_main Current thread's C stack trace (most recent call first): Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/libpython3.14.dylib"", at _Py_DumpStack+0x44 [0x104620fc4] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/libpython3.14.dylib"", at faulthandler_dump_c_stack+0x54 [0x104699c68] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/libpython3.14.dylib"", at faulthandler_fatal_error+0x16c [0x104699b18] Binary file ""/usr/lib/system/libsystem_platform.dylib"", at _sigtramp+0x38 [0x184e696a4] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/PyQt6/Qt6/plugins/platforms/libqcocoa.dylib"", at qt_plugin_instance+0x7c7e8 [0x11c870008] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at -[NSAccessibilityAttributeAccessorInfo getAttributeValue:forObject:]+0x3c [0x188eb7364] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at ___NSAccessibilityEntryPointValueForAttribute_block_invoke.770+0x5f0 [0x189643af4] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at NSAccessibilityPerformEntryPointObject+0x2c [0x18963f6b4] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at _NSAccessibilityEntryPointValueForAttribute+0xe0 [0x189084914] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at -[NSObject(NSObjectAccessibilityAttributeAccessAdditions) accessibilityArrayAttributeCount:]+0x24 [0x18939ca4c] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at -[NSObject(NSAccessibilityInternal) _accessibilityArrayAttributeCount:clientError:]+0x78 [0x18939d974] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at GetAttributeValueCount+0xb4 [0x1893a129c] Binary file ""/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices"", at __AXCopyAttributeValueForHierarchy+0x98 [0x18bca46a0] Binary file ""/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices"", at _AXXMIGCopyHierarchy+0x638 [0x18bca2b30] Binary file ""/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices"", at _XCopyHierarchy+0x24c [0x18bcc1eb0] Binary file ""/System/Library/Frameworks/ApplicationServices.framework/Versions/A/Frameworks/HIServices.framework/Versions/A/HIServices"", at mshMIGPerform+0xd0 [0x18bc7fff8] Binary file ""/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation"", at __CFRUNLOOP_IS_CALLING_OUT_TO_A_SOURCE1_PERFORM_FUNCTION__+0x3c [0x184f1ae50] Binary file ""/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation"", at __CFRunLoopDoSource1+0x1fc [0x184f1ad78] Binary file ""/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation"", at __CFRunLoopRun+0x898 [0x184f19778] Binary file ""/System/Library/Frameworks/CoreFoundation.framework/Versions/A/CoreFoundation"", at CFRunLoopRunSpecific+0x23c [0x184f18858] Binary file ""/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox"", at RunCurrentEventLoopInMode+0x144 [0x1909c027c] Binary file ""/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox"", at ReceiveNextEventCommon+0x2a4 [0x1909c34e8] Binary file ""/System/Library/Frameworks/Carbon.framework/Versions/A/Frameworks/HIToolbox.framework/Versions/A/HIToolbox"", at _BlockUntilNextEventMatchingListInModeWithFilter+0x4c [0x190b4e484] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at _DPSNextEvent+0x2ac [0x188e3aa34] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at -[NSApplication(NSEventRouting) _nextEventMatchingEventMask:untilDate:inMode:dequeue:]+0x2b0 [0x1897d95cc] Binary file ""/System/Library/Frameworks/AppKit.framework/Versions/C/AppKit"", at -[NSApplication run]+0x1e0 [0x188e2dbe4] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/PyQt6/Qt6/plugins/platforms/libqcocoa.dylib"", at qt_plugin_instance+0xdde8 [0x11c801608] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/PyQt6/Qt6/lib/QtCore.framework/Versions/A/QtCore"", at _ZN10QEventLoop4execE6QFlagsINS_17ProcessEventsFlagEE+0x24c [0x10686df9c] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/PyQt6/Qt6/lib/QtCore.framework/Versions/A/QtCore"", at _ZN16QCoreApplication4execEv+0xe4 [0x106864704] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/python3.14/site-packages/PyQt6/QtWidgets.abi3.so"", at _ZL22meth_QApplication_execP7_objectS0_+0x60 [0x107a67c1c] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/libpython3.14.dylib"", at cfunction_call+0x6c [0x103f9fab8] Binary file ""/Applications/ChimeraX_Daily.app/Contents/Library/Frameworks/Python.framework/Versions/3.14/lib/libpython3.14.dylib"", at _TAIL_CALL_CALL.llvm.12785051352303791014+0x66c [0x103d64ae8] Extension modules: chimerax.arrays._arrays, numpy._core._multiarray_umath, numpy.linalg._umath_linalg, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.map._map, psutil._psutil_osx, lxml._elementpath, lxml.etree, chimerax.surface._surface, chimerax.pdb_lib._load_libs, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, 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written=1462K(0%) resident=1462K(0%) swapped_out=0K(0%) unallocated=2.9G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 128K 1 Activity Tracing 256K 1 CG image 5264K 11 CG raster data 3296K 7 ColorSync 688K 32 CoreAnimation 240K 15 CoreGraphics 64K 4 CoreUI image data 3472K 25 Foundation 16K 1 Kernel Alloc Once 32K 1 MALLOC 2.6G 110 MALLOC guard page 288K 18 Mach message 64K 3 OpenGL GLSL 256K 3 PROTECTED_MEMORY 16K 1 STACK GUARD 512K 32 Stack 189.6M 33 Stack Guard 56.0M 1 VM_ALLOCATE 61.8M 119 VM_ALLOCATE (reserved) 16K 1 reserved VM address space (unallocated) __AUTH 5441K 690 __AUTH_CONST 76.8M 936 __CTF 824 1 __DATA 31.9M 995 __DATA_CONST 53.7M 1016 __DATA_DIRTY 2776K 340 __FONT_DATA 2352 1 __GLSLBUILTINS 5174K 1 __INFO_FILTER 8 1 __LINKEDIT 641.0M 74 __OBJC_RO 61.4M 1 __OBJC_RW 2397K 1 __TEXT 1.3G 1018 __TEXT (graphics) 16.8M 18 __TPRO_CONST 128K 2 dyld private memory 304K 4 mapped file 259.6M 50 page table in kernel 1462K 1 shared memory 3696K 25 =========== ======= ======= TOTAL 5.3G 5594 TOTAL, minus reserved VM space 5.3G 5594 "", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""logWritingSignature"" : ""b9157bc68ef2ffcbba0f7822dab59bf63c4ba56d"", ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""61675b89201f677a9a4cbd65"", ""factorPackIds"" : { ""HEALTH_FEATURE_AVAILABILITY"" : ""65a855f5f087695cfac03d1f"" }, ""deploymentId"" : 240000275 }, { ""rolloutId"" : ""6410af69ed1e1e7ab93ed169"", ""factorPackIds"" : { }, ""deploymentId"" : 240000011 } ], ""experiments"" : [ ] } } ===== Log before crash start ===== UCSF ChimeraX version: 1.13.dev202608172052 (2026-08-17) © 2016-2026 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J16_class_01_00142_volume.mrc Opened cryosparc_P53_J16_class_01_00142_volume.mrc as #1, grid size 128,128,128, pixel 1.94, shown at level 0.262, step 1, values float32 > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J16_class_02_00142_volume.mrc Opened cryosparc_P53_J16_class_02_00142_volume.mrc as #2, grid size 128,128,128, pixel 1.94, shown at level 0.262, step 1, values float32 > hide #!1 models > set bgColor white > volume #2 level 0.4084 > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J16_class_00_00142_volume.mrc Opened cryosparc_P53_J16_class_00_00142_volume.mrc as #3, grid size 128,128,128, pixel 1.94, shown at level 0.427, step 1, values float32 > hide #!2 models > volume #3 level 0.6193 > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J25_005_volume_map.mrc Opened cryosparc_P53_J25_005_volume_map.mrc as #4, grid size 340,340,340, pixel 0.732, shown at level 0.079, step 2, values float32 > hide #!3 models ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.13.dev202608172052 (2026-08-17) © 2016-2026 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J16_class_00_00142_volume.mrc Opened cryosparc_P53_J16_class_00_00142_volume.mrc as #1, grid size 128,128,128, pixel 1.94, shown at level 0.427, step 1, values float32 > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J16_class_01_00142_volume.mrc Opened cryosparc_P53_J16_class_01_00142_volume.mrc as #2, grid size 128,128,128, pixel 1.94, shown at level 0.262, step 1, values float32 > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J16_class_02_00142_volume.mrc Opened cryosparc_P53_J16_class_02_00142_volume.mrc as #3, grid size 128,128,128, pixel 1.94, shown at level 0.262, step 1, values float32 > open > /Users/yang/Desktop/DUF3800/Flowchart/TbCar6dL/cryosparc_P53_J25_005_volume_map.mrc Opened cryosparc_P53_J25_005_volume_map.mrc as #4, grid size 340,340,340, pixel 0.732, shown at level 0.079, step 2, values float32 OpenGL version: 4.1 Metal - 89.4 OpenGL renderer: Apple M3 Max OpenGL vendor: Apple Python: 3.14.6 Locale: C.UTF-8 Qt version: PyQt6 6.10.2, Qt 6.10.0 Qt runtime version: 6.10.2 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: Mac15,10 Model Number: MRX53LL/A Chip: Apple M3 Max Total Number of Cores: 14 (10 performance and 4 efficiency) Memory: 36 GB System Firmware Version: mBoot-18000.161.10 OS Loader Version: 11881.140.96.701.1 Software: System Software Overview: System Version: macOS 15.7.9 (24G830) Kernel Version: Darwin 24.6.0 Time since boot: 1 hour, 25 minutes Graphics/Displays: Apple M3 Max: Chipset Model: Apple M3 Max Type: GPU Bus: Built-In Total Number of Cores: 30 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: DELL U4323QE: Resolution: 7616 x 4284 UI Looks like: 3808 x 2142 @ 60.00Hz Main Display: Yes Mirror: Off Online: Yes Rotation: Supported Television: Yes LG ULTRAGEAR: Resolution: 2560 x 1440 (QHD/WQHD - Wide Quad High Definition) UI Looks like: 1280 x 720 @ 60.00Hz Mirror: Off Online: Yes Rotation: Supported LG HDR 4K: Resolution: 3888 x 6912 UI Looks like: 1944 x 3456 @ 60.00Hz Mirror: Off Online: Yes Rotation: 90 Installed Packages: accessible-pygments: 0.0.5 aiohappyeyeballs: 2.7.1 aiohttp: 3.14.3 aiosignal: 1.4.0 alabaster: 1.0.0 annotated-types: 0.8.0 anyio: 4.14.2 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.2 attrs: 26.1.0 babel: 2.18.0 beautifulsoup4: 4.15.0 blockdiag: 3.0.0 blosc2: 4.11.0 build: 1.5.0 certifi: 2026.7.22 cffi: 2.1.1 cftime: 1.6.5 charset-normalizer: 3.5.1 ChimeraX-AddCharge: 1.5.20 ChimeraX-AddH: 2.3.1 ChimeraX-AlignmentAlgorithms: 2.0.3 ChimeraX-AlignmentHdrs: 3.6.2 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 3.2.2 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Animations: 1.0 ChimeraX-Aniso: 1.3.2 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.71.1 ChimeraX-AtomicLibrary: 14.4.3 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.3 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-Boltz: 1.1 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.2 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.6.0 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4.1 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.5.1 ChimeraX-ChemGroup: 2.0.2 ChimeraX-Clashes: 2.4 ChimeraX-Cluster: 1.0.1 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.8 ChimeraX-CommandLine: 1.3.1 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.13.dev202608172052 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.6 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.3 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.2.2 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5.4 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.4 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.8.5 ChimeraX-Label: 1.5 ChimeraX-LightingGUI: 1.0 ChimeraX-ListInfo: 1.3.1 ChimeraX-Log: 1.2.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.3 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchAlign: 1.2.1 ChimeraX-MatchMaker: 2.4.1 ChimeraX-MCopy: 1.0 ChimeraX-MCPServer: 0.2.0 ChimeraX-MDcrds: 2.20 ChimeraX-Meeting: 1.0.1 ChimeraX-Minimize: 1.4.4 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.17 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.24 ChimeraX-ModelPanel: 1.6.1 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.4 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0.1 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.16.2 ChimeraX-OpenFold: 1.0 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.13 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.5 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.4 ChimeraX-ProfileGrids: 1.12 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.8.3 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.3 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.3 ChimeraX-Scenes: 0.3.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.3 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.12 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.20 ChimeraX-Shape: 1.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SNFG: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.20 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5.3 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.4 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.56 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.2 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDock: 1.6.5 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.5 ChimeraX-Zone: 1.0.1 click: 8.4.2 colorama: 0.4.6 comm: 0.2.3 contourpy: 1.3.3 coverage: 7.15.4 cryptography: 50.0.0 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.2.9 debugpy: 1.8.21 decorator: 5.3.1 docutils: 0.22 executing: 2.2.1 filelock: 3.32.0 fonttools: 4.63.0 frozenlist: 1.8.0 funcparserlib: 2.0.0a0 glfw: 2.10.2 grako: 3.16.5 h11: 0.16.0 h2: 4.4.1 h5py: 3.16.0 hpack: 4.2.0 html2text: 2025.4.15 httpcore: 1.0.9 httpx: 0.28.1 httpx-sse: 0.4.3 hyperframe: 6.1.0 idna: 3.18 ihm: 2.2 imagecodecs: 2026.6.26 imagesize: 2.0.0 iniconfig: 2.3.0 ipykernel: 7.3.0 ipython: 9.14.1 ipython_pygments_lexers: 1.1.1 jedi: 0.20.0 Jinja2: 3.1.6 jsonschema: 4.26.0 jsonschema-specifications: 2025.9.1 jupyter_client: 8.9.1 jupyter_core: 5.9.1 kiwisolver: 1.5.0 line_profiler: 5.0.2 lxml: 6.1.1 lz4: 4.4.5 Markdown: 3.10.2 markdown-it-py: 4.2.0 MarkupSafe: 3.0.3 matplotlib: 3.10.7 matplotlib-inline: 0.2.2 mcp: 1.28.1 mdurl: 0.1.2 msgpack: 1.2.1 multidict: 6.7.1 ndindex: 1.10.1 nest-asyncio2: 1.7.2 netCDF4: 1.7.4 networkx: 3.3 numexpr: 2.14.2 numpy: 2.4.6 OpenMM: 8.4.0 openvr: 1.26.701 packaging: 26.2 ParmEd: 4.2.2 parso: 0.8.7 pep517: 0.13.1 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 12.3.0 pip: 26.1.2 pkginfo: 1.12.1.2 platformdirs: 4.11.3 pluggy: 1.6.0 prompt_toolkit: 3.0.53 propcache: 0.5.2 psutil: 7.2.2 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pybind11: 3.0.4 pycollada: 0.8 pycparser: 3.0 pydantic: 2.13.4 pydantic-settings: 2.15.0 pydantic_core: 2.46.4 pydata-sphinx-theme: 0.20.0 Pygments: 2.20.0 PyJWT: 2.13.0 pynmrstar: 3.5.1 PyOpenGL: 3.1.10 PyOpenGL-accelerate: 3.1.10 pyopenxr: 1.1.4501 pyparsing: 3.3.2 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.10.2 PyQt6-Qt6: 6.10.2 PyQt6-WebEngine-commercial: 6.10.0 PyQt6-WebEngine-Qt6: 6.10.2 PyQt6_sip: 13.10.3 pytest: 9.1.1 pytest-cov: 7.1.0 python-dateutil: 2.9.0.post0 python-dotenv: 1.2.3 python-multipart: 0.0.32 pyzmq: 27.1.0 qtconsole: 5.7.2 QtPy: 2.4.3 qtshim: 1.2.2 RandomWords: 0.4.0 referencing: 0.37.0 requests: 2.34.2 rich: 15.0.0 roman-numerals: 4.1.0 rpds-py: 2026.6.3 scipy: 1.18.0 setuptools: 83.0.0 sfftk-rw: 0.8.1 six: 1.17.0 snowballstemmer: 3.1.1 sortedcontainers: 2.4.0 soupsieve: 2.9.2 Sphinx: 9.1.0 sphinx-autodoc-typehints: 3.13.0 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 sse-starlette: 3.4.8 stack-data: 0.6.3 starlette: 1.6.0 superqt: 0.8.1 tables: 3.11.1 threadpoolctl: 3.6.0 tifffile: 2026.7.14 tinyarray: 1.2.5 tornado: 6.5.8 tqdm: 4.70.0 traitlets: 5.15.1 typing-inspection: 0.4.4 typing_extensions: 4.16.0 urllib3: 2.7.0 uvicorn: 0.52.3 wcwidth: 0.8.2 webcolors: 25.10.0 wheel: 0.47.0 wheel-filename: 1.4.2 yarl: 1.24.5 }}} " defect closed normal Window Toolkit limitation all ChimeraX