id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 18199 Crash in glBufferSubData, and error opening stack of 2D TIFF images chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-15.5-arm64-arm-64bit ChimeraX Version: 1.10 (2025-06-26 08:57:52 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Fatal Python error: Bus error Thread 0x00000003470af000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 579 in _handle_results File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x00000003460a3000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 531 in _handle_tasks File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000000345097000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/selectors.py"", line 415 in select File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/connection.py"", line 930 in wait File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 502 in _wait_for_updates File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 522 in _handle_workers File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000034408b000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000034307f000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000000342073000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000000341067000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000034005b000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000033f04f000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000033e043000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000033d037000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000033c02b000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000033b01f000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x000000033a013000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Thread 0x0000000339007000 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/multiprocessing/pool.py"", line 114 in worker File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 975 in run File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 1038 in _bootstrap_inner File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/threading.py"", line 995 in _bootstrap Current thread 0x00000001fc0a1f00 (most recent call first): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/OpenGL/GL/VERSION/GL_1_5.py"", line 125 in glBufferSubData File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py"", line 2831 in update_buffer_data File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 1917 in update_buffers File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 1929 in activate_bindings File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 818 in _draw_geometry File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 791 in draw_self File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 784 in draw File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 1572 in _draw_multiple File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 1559 in draw_opaque File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/drawing.py"", line 1584 in draw_depth File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/opengl.py"", line 1560 in use_shadow_map File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py"", line 631 in _compute_shadowmaps File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py"", line 227 in _draw_scene File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/graphics/view.py"", line 188 in draw File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py"", line 84 in draw_new_frame File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/updateloop.py"", line 169 in update_graphics_now File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/map/volume_viewer.py"", line 2256 in moved_marker_cb File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/map/histogram.py"", line 416 in move_marker_cb File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/map/volume_viewer.py"", line 2182 in _drag File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/map/volume_viewer.py"", line 2185 in mouseReleaseEvent File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py"", line 368 in event_loop File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1057 in init File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1220 in File """", line 88 in _run_code File """", line 198 in _run_module_as_main Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtNetwork, PyQt6.QtPrintSupport, PyQt6.QtWebChannel, PyQt6.QtWebEngineCore, PyQt6.QtWebEngineWidgets, psutil._psutil_osx, psutil._psutil_posix, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.map._map, chimerax.pdb_lib._load_libs, chimerax.surface._surface, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, PIL._imaging, PIL._imagingmath (total: 43) {""app_name"":""ChimeraX"",""timestamp"":""2025-07-15 20:23:41.00 +0200"",""app_version"":""1.10.0"",""slice_uuid"":""9cf8124a-d876-34ad-b7ee-c011183ebc15"",""build_version"":""1.10.0.0"",""platform"":1,""bundleID"":""edu.ucsf.cgl.ChimeraX"",""share_with_app_devs"":0,""is_first_party"":0,""bug_type"":""309"",""os_version"":""macOS 15.5 (24F74)"",""roots_installed"":0,""name"":""ChimeraX"",""incident_id"":""0D344B79-849C-45D3-BE44-17C039E54FB1""} { ""uptime"" : 260000, ""procRole"" : ""Foreground"", ""version"" : 2, ""userID"" : 501, ""deployVersion"" : 210, ""modelCode"" : ""Mac14,5"", ""coalitionID"" : 53149, ""osVersion"" : { ""train"" : ""macOS 15.5"", ""build"" : ""24F74"", ""releaseType"" : ""User"" }, ""captureTime"" : ""2025-07-15 20:23:31.7346 +0200"", ""codeSigningMonitor"" : 1, ""incident"" : ""0D344B79-849C-45D3-BE44-17C039E54FB1"", ""pid"" : 47512, ""translated"" : false, ""cpuType"" : ""ARM-64"", ""roots_installed"" : 0, ""bug_type"" : ""309"", ""procLaunch"" : ""2025-07-15 16:13:00.0375 +0200"", ""procStartAbsTime"" : 6182392153791, ""procExitAbsTime"" : 6394970048043, ""procName"" : ""ChimeraX"", ""procPath"" : ""\/Applications\/ChimeraX-1.10.app\/Contents\/MacOS\/ChimeraX"", ""bundleInfo"" : {""CFBundleShortVersionString"":""1.10.0"",""CFBundleVersion"":""1.10.0.0"",""CFBundleIdentifier"":""edu.ucsf.cgl.ChimeraX""}, ""storeInfo"" : {""deviceIdentifierForVendor"":""A40349E2-9608-5CBE-9B54-10DE44833113"",""thirdParty"":true}, ""parentProc"" : ""launchd"", ""parentPid"" : 1, ""coalitionName"" : ""edu.ucsf.cgl.ChimeraX"", ""crashReporterKey"" : ""5D9A2C9B-53FF-17DA-7C57-36A74604BD84"", ""appleIntelligenceStatus"" : {""state"":""available""}, ""codeSigningID"" : ""edu.ucsf.cgl.ChimeraX"", ""codeSigningTeamID"" : ""LWV8X224YF"", ""codeSigningFlags"" : 570491649, ""codeSigningValidationCategory"" : 6, ""codeSigningTrustLevel"" : 4294967295, ""codeSigningAuxiliaryInfo"" : 0, ""instructionByteStream"" : {""beforePC"":""fyMD1f17v6n9AwCRm+D\/l78DAJH9e8Go\/w9f1sADX9YQKYDSARAA1A=="",""atPC"":""AwEAVH8jA9X9e7+p\/QMAkZDg\/5e\/AwCR\/XvBqP8PX9bAA1\/WcAqA0g==""}, ""bootSessionUUID"" : ""D5EA63CB-602A-4413-B12D-5B289961F955"", ""wakeTime"" : 6134, ""sleepWakeUUID"" : ""DE279CED-5BBF-4A34-BA6C-DC06D8C5F297"", ""sip"" : ""enabled"", ""vmRegionInfo"" : ""0x11f204000 is in 0x11f204000-0x11f5f0000; bytes after start: 0 bytes before end: 4112383\n REGION TYPE START - END [ VSIZE] PRT\/MAX SHRMOD REGION DETAIL\n VM_ALLOCATE 11f200000-11f204000 [ 16K] rw-\/rwx SM=PRV \n---> __TEXT 11f204000-11f5f0000 [ 4016K] r-x\/rwx SM=COW \/Applications\/ChimeraX-1.10.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQml.framework\/Versions\/A\/QtQml\n __DATA_CONST 11f5f0000-11f614000 [ 144K] r--\/rwx SM=COW \/Applications\/ChimeraX-1.10.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQml.framework\/Versions\/A\/QtQml"", ""exception"" : {""codes"":""0x0000000000000002, 0x000000011f204000"",""rawCodes"":[2,4817174528],""type"":""EXC_BAD_ACCESS"",""signal"":""SIGBUS"",""subtype"":""KERN_PROTECTION_FAILURE at 0x000000011f204000""}, ""termination"" : {""flags"":0,""code"":10,""namespace"":""SIGNAL"",""indicator"":""Bus error: 10"",""byProc"":""ChimeraX"",""byPid"":47512}, ""vmregioninfo"" : ""0x11f204000 is in 0x11f204000-0x11f5f0000; bytes after start: 0 bytes before end: 4112383\n REGION TYPE START - 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""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.AppKit"", ""size"" : 21568640, ""uuid"" : ""5d0da1bd-412c-3ed8-84e9-40ca62fe7b42"", ""path"" : ""\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit"", ""name"" : ""AppKit"", ""CFBundleVersion"" : ""2575.60.5"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 6673055744, ""size"" : 636112, ""uuid"" : ""9cf0401a-a938-389e-a77d-9e9608076ccf"", ""path"" : ""\/usr\/lib\/dyld"", ""name"" : ""dyld"" }, { ""size"" : 0, ""source"" : ""A"", ""base"" : 0, ""uuid"" : ""00000000-0000-0000-0000-000000000000"" }, { ""source"" : ""P"", ""arch"" : ""arm64e"", ""base"" : 6700339200, ""CFBundleShortVersionString"" : ""6.9"", ""CFBundleIdentifier"" : ""com.apple.Foundation"", ""size"" : 14586624, ""uuid"" : ""e8f6a451-0acc-3e05-b18f-fec6618ce44a"", ""path"" : ""\/System\/Library\/Frameworks\/Foundation.framework\/Versions\/C\/Foundation"", ""name"" : ""Foundation"", ""CFBundleVersion"" : ""3502.1.401"" } ], ""sharedCache"" : { ""base"" : 6672220160, ""size"" : 5047205888, ""uuid"" : ""d7397d7f-8df9-3920-81a7-c0a144be9c51"" }, ""vmSummary"" : ""ReadOnly portion of Libraries: Total=1.9G resident=0K(0%) swapped_out_or_unallocated=1.9G(100%)\nWritable regions: Total=28.2G written=18.7M(0%) resident=15.2M(0%) swapped_out=3632K(0%) unallocated=28.2G(100%)\n\n VIRTUAL REGION \nREGION TYPE SIZE COUNT (non-coalesced) \n=========== ======= ======= \nAccelerate framework 256K 2 \nActivity Tracing 256K 1 \nCG image 1648K 35 \nColorSync 656K 33 \nCoreAnimation 4576K 164 \nCoreGraphics 48K 3 \nCoreUI image data 5440K 42 \nFoundation 48K 2 \nKernel Alloc Once 1072K 2 \nMALLOC 21.2G 326 \nMALLOC guard page 288K 18 \nMach message 64K 3 \nOpenGL GLSL 384K 4 \nSTACK GUARD 928K 58 \nStack 443.4M 59 \nStack Guard 56.0M 1 \nVM_ALLOCATE 6.3G 152 \nVM_ALLOCATE (reserved) 256.0M 4 reserved VM address space (unallocated)\n__AUTH 5521K 697 \n__AUTH_CONST 77.4M 944 \n__CTF 824 1 \n__DATA 37.0M 1068 \n__DATA_CONST 36.9M 1088 \n__DATA_DIRTY 2778K 342 \n__FONT_DATA 2352 1 \n__GLSLBUILTINS 5174K 1 \n__INFO_FILTER 8 1 \n__LINKEDIT 644.4M 138 \n__OBJC_RO 61.4M 1 \n__OBJC_RW 2396K 1 \n__TEXT 1.3G 1105 \n__TEXT (graphics) 224K 3 \n__TPRO_CONST 128K 2 \ndyld private memory 688K 7 \nmapped file 289.1M 70 \npage table in kernel 15.2M 1 \nshared memory 3680K 24 \n=========== ======= ======= \nTOTAL 30.7G 6404 \nTOTAL, minus reserved VM space 30.5G 6404 \n"", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""logWritingSignature"" : ""df8c2c257503a65d87c6d6e34aac9cee634d3060"", ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""60186475825c62000ccf5450"", ""factorPackIds"" : { }, ""deploymentId"" : 240000083 }, { ""rolloutId"" : ""67648e5334a82511f4acf879"", ""factorPackIds"" : { }, ""deploymentId"" : 240000008 } ], ""experiments"" : [ { ""treatmentId"" : ""f18344bb-554f-48ae-8449-e108a8813a55"", ""experimentId"" : ""6685b5584477001000e8c6c9"", ""deploymentId"" : 400000009 } ] } } ===== Log before crash start ===== Startup Messages --- note | available bundle cache has not been initialized yet You can double click a model's Name or ID in the model panel to edit those fields UCSF ChimeraX version: 1.10 (2025-06-26) © 2016-2025 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open ""/Users/boud/Downloads/M3#1594/cranium and mandible > Sarmientosaurus.ply"" Unrecognized file suffix '.ply' > open > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3309.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3310.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3311.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3312.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3313.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3314.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3315.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3316.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3317.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3318.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3319.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3320.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3321.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3322.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3323.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3324.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3325.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3326.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3327.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3328.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3329.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3330.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3331.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3332.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3333.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3334.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3335.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3336.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3337.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3338.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3339.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3340.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3341.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3342.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3343.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3344.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3224.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3225.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3226.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3227.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3228.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3229.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3230.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3231.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3232.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3233.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3234.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3235.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3236.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3237.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3238.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3239.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3240.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3241.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3242.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3243.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3244.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3245.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3246.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3247.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3248.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3249.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3250.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3251.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3252.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3253.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3254.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3255.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3256.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3257.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3258.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3259.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3260.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3261.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3262.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3263.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3264.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3265.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3266.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3267.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3268.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3269.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3270.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3271.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3272.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3273.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3274.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3275.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3276.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3277.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3278.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3279.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3280.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3281.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3282.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3283.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3284.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3285.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3286.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3287.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3288.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3289.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3290.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3291.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3292.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3293.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3294.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3295.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3296.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3297.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3298.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3299.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3300.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3301.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3302.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3303.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3304.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3305.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched3306.tiff > 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/Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2903.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2904.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2905.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2906.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2907.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2908.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2909.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2910.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2911.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2912.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2913.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2914.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2915.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2916.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2917.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2918.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2919.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2920.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2921.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2922.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2923.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2924.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2925.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2926.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2927.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2928.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2929.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2930.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2931.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2932.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2933.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2934.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2935.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2936.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2937.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2938.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2939.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2940.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2941.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2942.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2943.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2944.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2945.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2946.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2947.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2948.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2949.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2950.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2951.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2952.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2953.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2954.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2955.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2956.tiff > /Users/boud/Downloads/Tri_127_pharate_pupa_late_stage_010_cropped_stiched/Tribolium_010_cropped_stiched2957.tiff Traceback (most recent call last): File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/open_command/dialog.py"", line 339, in _qt_safe run(session, ""open "" + "" "".join([FileNameArg.unparse(p) for p in paths]) + ("""" File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/core/commands/run.py"", line 49, in run results = command.run(text, log=log, return_json=return_json) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/core/commands/cli.py"", line 3221, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/open_command/cmd.py"", line 132, in cmd_open models = Command(session, registry=registry).run(provider_cmd_text, log=log)[0] ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/core/commands/cli.py"", line 3221, in run result = ci.function(session, **kw_args) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/open_command/cmd.py"", line 193, in provider_open models, status = collated_open(session, None, paths, data_format, _add_models, log_errors, ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/open_command/cmd.py"", line 526, in collated_open return remember_data_format() ^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/open_command/cmd.py"", line 497, in remember_data_format models, status = func(*func_args, **func_kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/__init__.py"", line 183, in open return open_map(session, path, format=_name, **kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map/volume.py"", line 3607, in open_map grids = open_file(path, file_type = format, log = session.logger, **kw) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map_data/fileformats.py"", line 171, in open_file data = open_func(apath, **okw) ^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map_data/imagestack/__init__.py"", line 25, in open grids.extend(open_stack(path_list, t, c, log=log)) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map_data/imagestack/__init__.py"", line 64, in open_stack if tiff_type == 'ImageJ': ^^^^^^^^^ UnboundLocalError: cannot access local variable 'tiff_type' where it is not associated with a value UnboundLocalError: cannot access local variable 'tiff_type' where it is not associated with a value File ""/Applications/ChimeraX-1.10.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site- packages/chimerax/map_data/imagestack/__init__.py"", line 64, in open_stack if tiff_type == 'ImageJ': ^^^^^^^^^ See log for complete Python traceback. > open /Users/boud/Downloads/antscan_processed_GAGA_5x_GAGA-04-07.tif Opened antscan_processed_GAGA_5x_GAGA-04-07.tif as #1, grid size 1926,1542,1728, pixel 1, shown at step 1, values uint8 > show cartoons > hide cartoons > style stick Changed 0 atom styles > style sphere Changed 0 atom styles > style sphere Changed 0 atom styles > style ball Changed 0 atom styles > show atoms > hide atoms > volume #1 level 71.99,0 level 177,0.8 level 255,1 > volume #1 level 71.99,0 level 141.7,0.7941 level 255,1 > volume #1 step 16 > volume #1 step 1 > volume #1 region 0,0,0,1925,1541,1727 step 16 > volume #1 step 1 > volume #1 step 4 > lighting simple > set bgColor white > set bgColor #ffffff00 > lighting simple > lighting soft > lighting full > lighting simple > lighting soft > lighting full > style stick Changed 0 atom styles > style sphere Changed 0 atom styles > style ball Changed 0 atom styles > show cartoons > hide cartoons > show atoms > hide atoms > volume #1 style image > volume #1 level 71.99,0 level 124.8,0.9706 level 255,1 > volume #1 level 71.99,0 level 54.75,0.9559 level 255,1 > volume #1 level 71.99,1 level 54.75,0.9559 level 255,1 > volume #1 level 71.99,1 level 54.75,0 level 255,1 > volume #1 level 97.63,0.4559 level 54.75,0 level 255,1 > volume #1 level 88.93,0.6618 level 54.75,0 level 255,1 > volume #1 style surface > volume #1 step 2 > volume #1 step 1 > lighting simple > lighting soft > lighting full > lighting simple > lighting full > volume #1 level 132.4 ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.10 (2025-06-26) © 2016-2025 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 Metal - 89.4 OpenGL renderer: Apple M2 Max OpenGL vendor: Apple Python: 3.11.4 Locale: en_US.UTF-8 Qt version: PyQt6 6.8.1, Qt 6.8.2 Qt runtime version: 6.8.2 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: Mac14,5 Model Number: Z17H001PJLL/A Chip: Apple M2 Max Total Number of Cores: 12 (8 performance and 4 efficiency) Memory: 64 GB System Firmware Version: 11881.121.1 OS Loader Version: 11881.121.1 Software: System Software Overview: System Version: macOS 15.5 (24F74) Kernel Version: Darwin 24.5.0 Time since boot: 8 days, 14 hours, 11 minutes Graphics/Displays: Apple M2 Max: Chipset Model: Apple M2 Max Type: GPU Bus: Built-In Total Number of Cores: 38 Vendor: Apple (0x106b) Metal Support: Metal 3 Displays: Color LCD: Display Type: Built-in Liquid Retina XDR Display Resolution: 3024 x 1964 Retina Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal Installed Packages: alabaster: 1.0.0 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 3.0.0 auditwheel: 6.4.0 babel: 2.17.0 beautifulsoup4: 4.13.3 blockdiag: 3.0.0 blosc2: 3.5.0 build: 1.2.2.post1 certifi: 2023.11.17 cftime: 1.6.4.post1 charset-normalizer: 3.4.2 ChimeraX-AddCharge: 1.5.19 ChimeraX-AddH: 2.2.7 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.6.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.20.2 ChimeraX-AlphaFold: 1.0.1 ChimeraX-AltlocExplorer: 1.1.2 ChimeraX-AmberInfo: 1.0 ChimeraX-Aniso: 1.1.4 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.60.7 ChimeraX-AtomicLibrary: 14.1.18 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.3 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 3.0.0 ChimeraX-Boltz: 1.0 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.2 ChimeraX-BuildStructure: 2.13.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.5.1 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.5 ChimeraX-ChemGroup: 2.0.2 ChimeraX-Clashes: 2.3 ChimeraX-ColorActions: 1.0.5 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.8 ChimeraX-CommandLine: 1.3 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.10 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.5 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.4 ChimeraX-Dicom: 1.2.7 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.4 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.4.1 ChimeraX-Hbonds: 2.5.1 ChimeraX-Help: 1.3 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.3 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-KVFinder: 1.6.2 ChimeraX-Label: 1.1.14 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.2 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.3 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.2.2 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.10.1 ChimeraX-MedicalToolbar: 1.1 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.16 ChimeraX-MMTF: 2.2 ChimeraX-ModelArchive: 1.0 ChimeraX-Modeller: 1.5.19 ChimeraX-ModelPanel: 1.5.1 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-MutationScores: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.2 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.2 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.14.1 ChimeraX-OrthoPick: 1.0.1 ChimeraX-PDB: 2.7.10 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.3 ChimeraX-ProfileGrids: 1.1.2 ChimeraX-PubChem: 2.2 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.6.3 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.3.1 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.3 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 3.5.7 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.17.1 ChimeraX-Shape: 1.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.2.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-SimilarStructures: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.19.1 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2.1 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5.2 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.2.3 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.45.2 ChimeraX-Umap: 1.0 ChimeraX-uniprot: 2.3.1 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.4.4 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.5 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.3.2 coverage: 7.9.1 cxservices: 1.2.3 cycler: 0.12.1 Cython: 3.0.12 debugpy: 1.8.14 decorator: 5.2.1 docutils: 0.21.2 executing: 2.2.0 filelock: 3.18.0 fonttools: 4.58.4 funcparserlib: 2.0.0a0 glfw: 2.9.0 grako: 3.16.5 h5py: 3.14.0 html2text: 2024.2.26 idna: 3.10 ihm: 2.2 imagecodecs: 2024.6.1 imagesize: 1.4.1 iniconfig: 2.1.0 ipykernel: 6.29.5 ipython: 8.26.0 ipywidgets: 8.1.7 jedi: 0.19.1 Jinja2: 3.1.6 jupyter_client: 8.6.3 jupyter_core: 5.8.1 jupyterlab_widgets: 3.0.15 kiwisolver: 1.4.8 line_profiler: 4.2.0 lxml: 5.3.1 lz4: 4.4.4 MarkupSafe: 3.0.2 matplotlib: 3.10.1 matplotlib-inline: 0.1.7 msgpack: 1.1.0 ndindex: 1.10.0 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.3 nibabel: 5.2.0 nptyping: 2.5.0 numexpr: 2.11.0 numpy: 1.26.4 OpenMM: 8.2.0 openvr: 1.26.701 packaging: 24.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 10.4.0 pip: 25.0.1 pkginfo: 1.11.1 platformdirs: 4.3.8 pluggy: 1.6.0 prompt_toolkit: 3.0.51 psutil: 7.0.0 ptyprocess: 0.7.0 pure_eval: 0.2.3 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.4.4 pyelftools: 0.32 Pygments: 2.18.0 pynmrstar: 3.3.5 pynrrd: 1.0.0 PyOpenGL: 3.1.9 PyOpenGL-accelerate: 3.1.9 pyopenxr: 1.1.4501 pyparsing: 3.2.3 pyproject_hooks: 1.2.0 PyQt6-commercial: 6.8.1 PyQt6-Qt6: 6.8.2 PyQt6-WebEngine-commercial: 6.8.0 PyQt6-WebEngine-Qt6: 6.8.2 PyQt6_sip: 13.10.0 pytest: 8.4.1 pytest-cov: 6.2.1 python-dateutil: 2.9.0.post0 pytz: 2025.2 pyzmq: 27.0.0 qtconsole: 5.5.2 QtPy: 2.4.3 qtshim: 1.1 RandomWords: 0.4.0 requests: 2.32.3 roman-numerals-py: 3.1.0 scipy: 1.14.0 setuptools: 78.1.0 sfftk-rw: 0.8.1 six: 1.16.0 snowballstemmer: 3.0.1 sortedcontainers: 2.4.0 soupsieve: 2.7 Sphinx: 8.2.3 sphinx-autodoc-typehints: 3.1.0 sphinxcontrib-applehelp: 2.0.0 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 2.0.0 sphinxcontrib-htmlhelp: 2.1.0 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 2.0.0 sphinxcontrib-serializinghtml: 2.0.0 stack-data: 0.6.3 superqt: 0.7.1 tables: 3.10.2 tcia_utils: 1.5.1 tifffile: 2025.3.13 tinyarray: 1.2.4 tornado: 6.5.1 traitlets: 5.14.3 typing_extensions: 4.14.0 tzdata: 2025.2 urllib3: 2.5.0 wcwidth: 0.2.13 webcolors: 24.11.1 wheel: 0.45.1 wheel-filename: 1.4.2 widgetsnbextension: 4.0.14 }}} " defect closed normal Graphics fixed all ChimeraX