﻿id	summary	reporter	owner	description	type	status	priority	milestone	component	version	resolution	keywords	cc	blockedby	blocking	notify_on_close	platform	project
15933	Crash in garbage collection	chimerax-bug-report@…	Eric Pettersen	"{{{
The following bug report has been submitted:
Platform:        macOS-13.6.9-x86_64-i386-64bit
ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC)
Description
Last time you used ChimeraX it crashed.
Please describe steps that led to the crash here.
Fatal Python error: Segmentation fault

Current thread 0x00007ff8559537c0 (most recent call first):
  Garbage-collecting
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/atomic/molarray.py"", line 161 in 
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/atomic/molarray.py"", line 161 in __iter__
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/atomic/selectors.py"", line 356 in _update_select_residues_menu
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/atomic/selectors.py"", line 242 in 
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/ui/gui.py"", line 275 in event_loop
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 918 in init
  File ""/Applications/ChimeraX-1.7.1.app/Contents/Library/Frameworks/Python.framework/Versions/3.11/lib/python3.11/site-packages/chimerax/core/__main__.py"", line 1069 in 
  File """", line 88 in _run_code
  File """", line 198 in _run_module_as_main

Extension modules: chimerax.arrays._arrays, numpy.core._multiarray_umath, numpy.core._multiarray_tests, numpy.linalg._umath_linalg, numpy.fft._pocketfft_internal, numpy.random._common, numpy.random.bit_generator, numpy.random._bounded_integers, numpy.random._mt19937, numpy.random.mtrand, numpy.random._philox, numpy.random._pcg64, numpy.random._sfc64, numpy.random._generator, chimerax.geometry._geometry, PyQt6.QtCore, PyQt6.QtGui, PyQt6.QtWidgets, PyQt6.QtWebChannel, PyQt6.QtNetwork, PyQt6.QtWebEngineCore, PyQt6.QtPrintSupport, PyQt6.QtWebEngineWidgets, chimerax.atomic_lib._load_libs, tinyarray, chimerax.atomic.cymol, chimerax.atomic.cytmpl, chimerax.pdb_lib._load_libs, chimerax.surface._surface, chimerax.map._map, charset_normalizer.md, PIL._imaging, matplotlib._c_internal_utils, matplotlib._path, kiwisolver._cext, matplotlib._image, PyQt6.QtOpenGL, PyQt6.QtOpenGLWidgets, OpenGL_accelerate.errorchecker, OpenGL_accelerate.wrapper, OpenGL_accelerate.formathandler, OpenGL_accelerate.arraydatatype, OpenGL_accelerate.latebind, OpenGL_accelerate.vbo, chimerax.core._mac_util, OpenGL_accelerate.numpy_formathandler, OpenGL_accelerate.nones_formathandler, chimerax.pdb._pdbio, chimerax.atomic._ribbons, chimerax.graphics._graphics, chimerax.mmcif._mmcif, chimerax.mmcif.mmcif, chimerax.alignment_algs._sw, chimerax.dssp._dssp, chimerax.alignment_algs._nw, PIL._imagingmath (total: 56)


{""app_name"":""ChimeraX"",""timestamp"":""2024-09-11 14:25:57.00 -0500"",""app_version"":""1.7.1"",""slice_uuid"":""194a3167-3db5-3029-8d22-1d742b826bb9"",""build_version"":""1.7.1.0"",""platform"":1,""bundleID"":""edu.ucsf.cgl.ChimeraX"",""share_with_app_devs"":0,""is_first_party"":0,""bug_type"":""309"",""os_version"":""macOS 13.6.9 (22G830)"",""roots_installed"":0,""name"":""ChimeraX"",""incident_id"":""28534ED4-ACA4-47DF-8ED0-A5362DA5B56D""}
{
  ""uptime"" : 1000000,
  ""procRole"" : ""Foreground"",
  ""version"" : 2,
  ""userID"" : 501,
  ""deployVersion"" : 210,
  ""modelCode"" : ""iMac18,3"",
  ""coalitionID"" : 6325,
  ""osVersion"" : {
    ""train"" : ""macOS 13.6.9"",
    ""build"" : ""22G830"",
    ""releaseType"" : ""User""
  },
  ""captureTime"" : ""2024-09-11 14:25:54.6556 -0500"",
  ""incident"" : ""28534ED4-ACA4-47DF-8ED0-A5362DA5B56D"",
  ""pid"" : 43068,
  ""cpuType"" : ""X86-64"",
  ""roots_installed"" : 0,
  ""bug_type"" : ""309"",
  ""procLaunch"" : ""2024-09-10 13:14:30.8237 -0500"",
  ""procStartAbsTime"" : 998534258728418,
  ""procExitAbsTime"" : 1032107983508770,
  ""procName"" : ""ChimeraX"",
  ""procPath"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/MacOS\/ChimeraX"",
  ""bundleInfo"" : {""CFBundleShortVersionString"":""1.7.1"",""CFBundleVersion"":""1.7.1.0"",""CFBundleIdentifier"":""edu.ucsf.cgl.ChimeraX""},
  ""storeInfo"" : {""deviceIdentifierForVendor"":""BAA69DD8-6E66-5ED8-B117-1D265EC12598"",""thirdParty"":true},
  ""parentProc"" : ""launchd"",
  ""parentPid"" : 1,
  ""coalitionName"" : ""edu.ucsf.cgl.ChimeraX"",
  ""crashReporterKey"" : ""77CFA7F5-DC7C-4870-3C7A-6662DF07730E"",
  ""codeSigningID"" : ""edu.ucsf.cgl.ChimeraX"",
  ""codeSigningTeamID"" : ""LWV8X224YF"",
  ""codeSigningFlags"" : 570491649,
  ""codeSigningValidationCategory"" : 6,
  ""codeSigningTrustLevel"" : 0,
  ""wakeTime"" : 15867,
  ""sleepWakeUUID"" : ""4BE83C6F-F6A3-41A7-B4C9-71E11DA744B2"",
  ""sip"" : ""enabled"",
  ""vmRegionInfo"" : ""0xa9 is not in any region.  Bytes before following region: 140737488211799\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      UNUSED SPACE AT START\n--->  \n      shared memory            7ffffffdd000-7ffffffde000 [    4K] r-x\/r-x SM=SHM  "",
  ""exception"" : {""codes"":""0x0000000000000001, 0x00000000000000a9"",""rawCodes"":[1,169],""type"":""EXC_BAD_ACCESS"",""signal"":""SIGSEGV"",""subtype"":""KERN_INVALID_ADDRESS at 0x00000000000000a9""},
  ""termination"" : {""flags"":0,""code"":11,""namespace"":""SIGNAL"",""indicator"":""Segmentation fault: 11"",""byProc"":""ChimeraX"",""byPid"":43068},
  ""vmregioninfo"" : ""0xa9 is not in any region.  Bytes before following region: 140737488211799\n      REGION TYPE                    START - END         [ VSIZE] PRT\/MAX SHRMOD  REGION DETAIL\n      UNUSED SPACE AT START\n--->  \n      shared memory            7ffffffdd000-7ffffffde000 [    4K] r-x\/r-x SM=SHM  "",
  ""extMods"" : {""caller"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""system"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""targeted"":{""thread_create"":0,""thread_set_state"":0,""task_for_pid"":0},""warnings"":0},
  ""faultingThread"" : 0,
  ""threads"" : [{""queue"":""com.apple.main-thread"",""instructionState"":{""instructionStream"":{""bytes"":[255,255,255,255,72,137,216,72,139,0,72,255,194,72,57,195,117,245,72,141,61,197,18,22,0,72,141,181,112,255,255,255,49,192,232,191,131,254,255,72,139,5,104,231,22,0,72,139,0,72,59,69,216,117,13,72,131,196,112,91,65,92,65,94,65,95,93,195,232,205,174,14,0,102,46,15,31,132,0,0,0,0,0,15,31,0,85,72,137,229,83,80,72,139,71,8,246,128,169,0,0,0,64,117,9,49,192,72,131,196,8,91,93,195,72,137,251,72,139,128,72,1,0,0,72,133,192,117,18,72,139,67,248,168,2,116,224,72,131,192,252,72,137,67,248,235,214,72,137,223,255,208,133,192,117,229,235,203,15,31,132,0,0,0,0,0,85,72,137,229,65,86,83,72,139,71,8,246,128,169,0,0,0,64,117,7,49,192,91,65,94,93],""offset"":96}},""frames"":[{""imageOffset"":33174,""symbol"":""__pthread_kill"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":24294,""symbol"":""pthread_kill"",""symbolLocation"":263,""imageIndex"":150},{""imageOffset"":271873,""symbol"":""raise"",""symbolLocation"":26,""imageIndex"":151},{""imageOffset"":2590164,""symbol"":""faulthandler_fatal_error"",""symbolLocation"":388,""imageIndex"":1},{""imageOffset"":13805,""symbol"":""_sigtramp"",""symbolLocation"":29,""imageIndex"":152},{""imageOffset"":0,""imageIndex"":153},{""imageOffset"":1210612,""symbol"":""tupletraverse"",""symbolLocation"":52,""imageIndex"":1},{""imageOffset"":2574472,""symbol"":""gc_collect_main"",""symbolLocation"":2568,""imageIndex"":1},{""imageOffset"":2580738,""symbol"":""_PyObject_GC_Link"",""symbolLocation"":306,""imageIndex"":1},{""imageOffset"":1289213,""symbol"":""_PyType_AllocNoTrack"",""symbolLocation"":125,""imageIndex"":1},{""imageOffset"":1237630,""symbol"":""PyType_GenericAlloc"",""symbolLocation"":14,""imageIndex"":1},{""imageOffset"":198266,""symbol"":""__pyx_tp_new_8chimerax_6atomic_5cymol_CyResidue(_typeobject*, _object*, _object*)"",""symbolLocation"":58,""imageIndex"":83},{""imageOffset"":1223445,""symbol"":""type_call"",""symbolLocation"":69,""imageIndex"":1},{""imageOffset"":680881,""symbol"":""_PyObject_MakeTpCall"",""symbolLocation"":129,""imageIndex"":1},{""imageOffset"":692231,""symbol"":""object_vacall"",""symbolLocation"":535,""imageIndex"":1},{""imageOffset"":693183,""symbol"":""PyObject_CallFunctionObjArgs"",""symbolLocation"":159,""imageIndex"":1},{""imageOffset"":363656,""symbol"":""pyinstance::PythonInstance::py_instance(bool) const"",""symbolLocation"":152,""imageIndex"":79},{""imageOffset"":249799,""symbol"":""__pyx_pw_8chimerax_6atomic_5cymol_9CyResidue_51c_ptr_to_py_inst(_object*, _object*, _object*)"",""symbolLocation"":87,""imageIndex"":83},{""imageOffset"":1095620,""symbol"":""cfunction_call"",""symbolLocation"":52,""imageIndex"":1},{""imageOffset"":680881,""symbol"":""_PyObject_MakeTpCall"",""symbolLocation"":129,""imageIndex"":1},{""imageOffset"":1917927,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":60455,""imageIndex"":1},{""imageOffset"":1942736,""symbol"":""_PyEval_Vector"",""symbolLocation"":128,""imageIndex"":1},{""imageOffset"":1262223,""symbol"":""slot_tp_iter"",""symbolLocation"":175,""imageIndex"":1},{""imageOffset"":1909862,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":52390,""imageIndex"":1},{""imageOffset"":1942736,""symbol"":""_PyEval_Vector"",""symbolLocation"":128,""imageIndex"":1},{""imageOffset"":1257368,""symbol"":""PyQtSlot::call(_object*, _object*) const"",""symbolLocation"":40,""imageIndex"":44},{""imageOffset"":1257114,""symbol"":""PyQtSlot::invoke(void**, _object*, void*, bool) const"",""symbolLocation"":362,""imageIndex"":44},{""imageOffset"":1261029,""symbol"":""PyQtSlotProxy::unislot(void**)"",""symbolLocation"":85,""imageIndex"":44},{""imageOffset"":1260890,""symbol"":""PyQtSlotProxy::qt_metacall(QMetaObject::Call, int, void**)"",""symbolLocation"":58,""imageIndex"":44},{""imageOffset"":777575,""imageIndex"":45},{""imageOffset"":1921451,""imageIndex"":48},{""imageOffset"":778274,""imageIndex"":45},{""imageOffset"":212192,""imageIndex"":68},{""imageOffset"":6908309,""symbol"":""-[NSMenu _sendMenuOpeningNotification:]"",""symbolLocation"":97,""imageIndex"":154},{""imageOffset"":3940508,""symbol"":""-[NSCarbonMenuImpl _carbonOpenEvent:handlerCallRef:]"",""symbolLocation"":191,""imageIndex"":154},{""imageOffset"":3167236,""symbol"":""NSSLMMenuEventHandler"",""symbolLocation"":990,""imageIndex"":154},{""imageOffset"":36159,""symbol"":""DispatchEventToHandlers(EventTargetRec*, OpaqueEventRef*, HandlerCallRec*)"",""symbolLocation"":1381,""imageIndex"":155},{""imageOffset"":33160,""symbol"":""SendEventToEventTargetInternal(OpaqueEventRef*, OpaqueEventTargetRef*, HandlerCallRec*)"",""symbolLocation"":333,""imageIndex"":155},{""imageOffset"":32815,""symbol"":""SendEventToEventTargetWithOptions"",""symbolLocation"":45,""imageIndex"":155},{""imageOffset"":554870,""symbol"":""SendMenuOpening(MenuSelectData*, MenuData*, double, unsigned int, unsigned int, __CFDictionary*, unsigned char, unsigned char*)"",""symbolLocation"":520,""imageIndex"":155},{""imageOffset"":1764360,""symbol"":""DrawTheMenu(MenuSelectData*, MenuData*, __CFArray**, unsigned char, unsigned char*)"",""symbolLocation"":296,""imageIndex"":155},{""imageOffset"":677484,""symbol"":""OpenSubmenu(MenuSelectData*, MenuData*, unsigned char, unsigned char*)"",""symbolLocation"":179,""imageIndex"":155},{""imageOffset"":1777487,""symbol"":""TrackMenuCommon(MenuSelectData&, unsigned char*, SelectionData*, MenuResult*, MenuResult*)"",""symbolLocation"":1224,""imageIndex"":155},{""imageOffset"":644200,""symbol"":""MenuSelectCore(MenuData*, Point, double, unsigned int, OpaqueMenuRef**, unsigned short*)"",""symbolLocation"":397,""imageIndex"":155},{""imageOffset"":643649,""symbol"":""_HandleMenuSelection2"",""symbolLocation"":459,""imageIndex"":155},{""imageOffset"":1887909,""symbol"":""_NSHandleCarbonMenuEvent"",""symbolLocation"":215,""imageIndex"":154},{""imageOffset"":1887506,""symbol"":""_DPSEventHandledByCarbon"",""symbolLocation"":54,""imageIndex"":154},{""imageOffset"":254059,""symbol"":""-[NSApplication(NSEvent) _nextEventMatchingEventMask:untilDate:inMode:dequeue:]"",""symbolLocation"":2919,""imageIndex"":154},{""imageOffset"":196663,""symbol"":""-[NSApplication run]"",""symbolLocation"":586,""imageIndex"":154},{""imageOffset"":102572,""imageIndex"":68},{""imageOffset"":488230,""symbol"":""QEventLoop::exec(QFlags)"",""symbolLocation"":486,""imageIndex"":45},{""imageOffset"":451125,""symbol"":""QCoreApplication::exec()"",""symbolLocation"":133,""imageIndex"":45},{""imageOffset"":2252186,""symbol"":""meth_QApplication_exec(_object*, _object*)"",""symbolLocation"":90,""imageIndex"":47},{""imageOffset"":1095658,""symbol"":""cfunction_call"",""symbolLocation"":90,""imageIndex"":1},{""imageOffset"":680881,""symbol"":""_PyObject_MakeTpCall"",""symbolLocation"":129,""imageIndex"":1},{""imageOffset"":1917927,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":60455,""imageIndex"":1},{""imageOffset"":1852538,""symbol"":""PyEval_EvalCode"",""symbolLocation"":282,""imageIndex"":1},{""imageOffset"":1830115,""symbol"":""builtin_exec"",""symbolLocation"":483,""imageIndex"":1},{""imageOffset"":1098052,""symbol"":""cfunction_vectorcall_FASTCALL_KEYWORDS"",""symbolLocation"":68,""imageIndex"":1},{""imageOffset"":1917679,""symbol"":""_PyEval_EvalFrameDefault"",""symbolLocation"":60207,""imageIndex"":1},{""imageOffset"":1942736,""symbol"":""_PyEval_Vector"",""symbolLocation"":128,""imageIndex"":1},{""imageOffset"":2561789,""symbol"":""pymain_run_module"",""symbolLocation"":253,""imageIndex"":1},{""imageOffset"":2560449,""symbol"":""Py_RunMain"",""symbolLocation"":2225,""imageIndex"":1},{""imageOffset"":2564475,""symbol"":""pymain_main"",""symbolLocation"":43,""imageIndex"":1},{""imageOffset"":2564426,""symbol"":""Py_Main"",""symbolLocation"":42,""imageIndex"":1},{""imageOffset"":15770,""symbol"":""main"",""symbolLocation"":122,""imageIndex"":0},{""imageOffset"":25624,""symbol"":""start"",""symbolLocation"":1896,""imageIndex"":156}],""id"":8241437,""triggered"":true,""threadState"":{""r13"":{""value"":5868112385},""rax"":{""value"":0},""rflags"":{""value"":582},""cpu"":{""value"":0},""r14"":{""value"":11},""rsi"":{""value"":11},""r8"":{""value"":2},""cr2"":{""value"":0},""rdx"":{""value"":0},""r10"":{""value"":140704564459456,""symbolLocation"":0,""symbol"":""_main_thread""},""r9"":{""value"":14757395258967641293},""r15"":{""value"":22},""rbx"":{""value"":140704564459456,""symbolLocation"":0,""symbol"":""_main_thread""},""trap"":{""value"":133},""err"":{""value"":33554760},""r11"":{""value"":582},""rip"":{""value"":140703432962454,""matchesCrashFrame"":1},""rbp"":{""value"":140358358784528},""rsp"":{""value"":140358358784488},""r12"":{""value"":259},""rcx"":{""value"":140358358784488},""flavor"":""x86_THREAD_STATE"",""rdi"":{""value"":259}},""name"":""CrBrowserMain""},{""id"":8241461,""frames"":[{""imageOffset"":16526,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":26456,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1242,""imageIndex"":150},{""imageOffset"":3466879,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":20},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241462,""frames"":[{""imageOffset"":16526,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":26456,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1242,""imageIndex"":150},{""imageOffset"":3466879,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":20},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241463,""frames"":[{""imageOffset"":16526,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":26456,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1242,""imageIndex"":150},{""imageOffset"":3466879,""symbol"":""blas_thread_server"",""symbolLocation"":207,""imageIndex"":20},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241535,""name"":""ThreadPoolServiceThread"",""frames"":[{""imageOffset"":44466,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":66456106,""imageIndex"":55},{""imageOffset"":66455847,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":65958573,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241537,""name"":""ThreadPoolBackgroundWorker"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66009023,""imageIndex"":55},{""imageOffset"":66011756,""imageIndex"":55},{""imageOffset"":66010589,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241538,""name"":""Chrome_IOThread"",""frames"":[{""imageOffset"":44466,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":66456106,""imageIndex"":55},{""imageOffset"":66455847,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":48386978,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241539,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241543,""name"":""CompositorTileWorker1"",""frames"":[{""imageOffset"":16526,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":26456,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1242,""imageIndex"":150},{""imageOffset"":66219291,""imageIndex"":55},{""imageOffset"":100616493,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241544,""name"":""Chrome_InProcGpuThread"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241545,""name"":""Chrome_ChildIOThread"",""frames"":[{""imageOffset"":44466,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":66456106,""imageIndex"":55},{""imageOffset"":66455847,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241546,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241547,""name"":""VizCompositorThread"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241554,""name"":""NetworkService"",""frames"":[{""imageOffset"":44466,""symbol"":""kevent64"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":66456106,""imageIndex"":55},{""imageOffset"":66455847,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241555,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241556,""name"":""ThreadPoolSingleThreadForegroundBlocking0"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66009023,""imageIndex"":55},{""imageOffset"":66011756,""imageIndex"":55},{""imageOffset"":66010829,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241579,""name"":""NetworkConfigWatcher"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241609,""name"":""com.apple.NSEventThread"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":511983,""symbol"":""__CFRunLoopServiceMachPort"",""symbolLocation"":145,""imageIndex"":157},{""imageOffset"":506480,""symbol"":""__CFRunLoopRun"",""symbolLocation"":1365,""imageIndex"":157},{""imageOffset"":503473,""symbol"":""CFRunLoopRunSpecific"",""symbolLocation"":560,""imageIndex"":157},{""imageOffset"":1699173,""symbol"":""_NSEventThread"",""symbolLocation"":132,""imageIndex"":154},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241635,""name"":""MemoryInfra"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66251759,""imageIndex"":55},{""imageOffset"":65421769,""imageIndex"":55},{""imageOffset"":65919580,""imageIndex"":55},{""imageOffset"":65624472,""imageIndex"":55},{""imageOffset"":66059960,""imageIndex"":55},{""imageOffset"":66060362,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8241636,""name"":""ThreadPoolSingleThreadSharedBackgroundBlocking1"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66009023,""imageIndex"":55},{""imageOffset"":66011034,""imageIndex"":55},{""imageOffset"":66010637,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8283859,""name"":""QFileInfoGatherer"",""frames"":[{""imageOffset"":16526,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":26456,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1242,""imageIndex"":150},{""imageOffset"":2107627,""imageIndex"":45},{""imageOffset"":2107486,""symbol"":""QWaitCondition::wait(QMutex*, QDeadlineTimer)"",""symbolLocation"":94,""imageIndex"":45},{""imageOffset"":4529677,""symbol"":""QFileInfoGatherer::run()"",""symbolLocation"":125,""imageIndex"":49},{""imageOffset"":2066019,""imageIndex"":45},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8329262,""name"":""QFileInfoGatherer"",""frames"":[{""imageOffset"":16526,""symbol"":""__psynch_cvwait"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":26456,""symbol"":""_pthread_cond_wait"",""symbolLocation"":1242,""imageIndex"":150},{""imageOffset"":2107627,""imageIndex"":45},{""imageOffset"":2107486,""symbol"":""QWaitCondition::wait(QMutex*, QDeadlineTimer)"",""symbolLocation"":94,""imageIndex"":45},{""imageOffset"":4529677,""symbol"":""QFileInfoGatherer::run()"",""symbolLocation"":125,""imageIndex"":49},{""imageOffset"":2066019,""imageIndex"":45},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8330012,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66009023,""imageIndex"":55},{""imageOffset"":66011756,""imageIndex"":55},{""imageOffset"":66010733,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8685184,""name"":""ThreadPoolForegroundWorker"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66009023,""imageIndex"":55},{""imageOffset"":66011756,""imageIndex"":55},{""imageOffset"":66010733,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8685235,""name"":""ThreadPoolBackgroundWorker"",""frames"":[{""imageOffset"":5458,""symbol"":""mach_msg2_trap"",""symbolLocation"":10,""imageIndex"":149},{""imageOffset"":63181,""symbol"":""mach_msg2_internal"",""symbolLocation"":78,""imageIndex"":149},{""imageOffset"":34180,""symbol"":""mach_msg_overwrite"",""symbolLocation"":692,""imageIndex"":149},{""imageOffset"":6202,""symbol"":""mach_msg"",""symbolLocation"":19,""imageIndex"":149},{""imageOffset"":66252326,""imageIndex"":55},{""imageOffset"":66009023,""imageIndex"":55},{""imageOffset"":66011034,""imageIndex"":55},{""imageOffset"":66010589,""imageIndex"":55},{""imageOffset"":66222344,""imageIndex"":55},{""imageOffset"":25043,""symbol"":""_pthread_start"",""symbolLocation"":125,""imageIndex"":150},{""imageOffset"":7123,""symbol"":""thread_start"",""symbolLocation"":15,""imageIndex"":150}]},{""id"":8685314,""frames"":[{""imageOffset"":7088,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":150}]},{""id"":8685420,""frames"":[{""imageOffset"":7088,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":150}]},{""id"":8685449,""frames"":[{""imageOffset"":7088,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":150}]},{""id"":8685465,""frames"":[{""imageOffset"":7088,""symbol"":""start_wqthread"",""symbolLocation"":0,""imageIndex"":150}]}],
  ""usedImages"" : [
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4517093376,
    ""CFBundleShortVersionString"" : ""1.7.1"",
    ""CFBundleIdentifier"" : ""edu.ucsf.cgl.ChimeraX"",
    ""size"" : 16384,
    ""uuid"" : ""194a3167-3db5-3029-8d22-1d742b826bb9"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/MacOS\/ChimeraX"",
    ""name"" : ""ChimeraX"",
    ""CFBundleVersion"" : ""1.7.1.0""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4531732480,
    ""CFBundleShortVersionString"" : ""3.11.2, (c) 2001-2023 Python Software Foundation."",
    ""CFBundleIdentifier"" : ""org.python.python"",
    ""size"" : 4079616,
    ""uuid"" : ""24670b23-d78a-3eaa-bca8-22faf877f190"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/Python"",
    ""name"" : ""Python"",
    ""CFBundleVersion"" : ""3.11.2""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4519923712,
    ""size"" : 49152,
    ""uuid"" : ""e72184af-f88a-3d22-985d-ba7ae840d7bb"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/math.cpython-311-darwin.so"",
    ""name"" : ""math.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4519669760,
    ""size"" : 65536,
    ""uuid"" : ""bce0a7e8-5fe0-3b22-a86a-efce56d39c06"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_datetime.cpython-311-darwin.so"",
    ""name"" : ""_datetime.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4519817216,
    ""size"" : 16384,
    ""uuid"" : ""aacd4a54-a0d7-3ca3-946c-75e1b46b8800"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_typing.cpython-311-darwin.so"",
    ""name"" : ""_typing.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522352640,
    ""size"" : 32768,
    ""uuid"" : ""2e40ac09-b4c6-3504-a3e2-a3913e730146"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/zlib.cpython-311-darwin.so"",
    ""name"" : ""zlib.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522450944,
    ""size"" : 16384,
    ""uuid"" : ""5264b516-4f77-3211-bbb5-8720cd62f60a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bz2.cpython-311-darwin.so"",
    ""name"" : ""_bz2.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4523094016,
    ""size"" : 196608,
    ""uuid"" : ""c1616b8c-e517-3843-9946-07100812a3fa"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_lzma.cpython-311-darwin.so"",
    ""name"" : ""_lzma.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522516480,
    ""size"" : 16384,
    ""uuid"" : ""f286872f-bf81-34a6-87be-7d1797853da1"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_bisect.cpython-311-darwin.so"",
    ""name"" : ""_bisect.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522582016,
    ""size"" : 16384,
    ""uuid"" : ""e0374123-b7f9-38e5-b11f-58349af543a6"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_random.cpython-311-darwin.so"",
    ""name"" : ""_random.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522647552,
    ""size"" : 32768,
    ""uuid"" : ""4857358d-b2e1-3822-aebb-06a8878b427d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_sha512.cpython-311-darwin.so"",
    ""name"" : ""_sha512.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522729472,
    ""size"" : 32768,
    ""uuid"" : ""e99b9ab9-9e03-3a38-ad6e-92f4c11a0ccd"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/binascii.cpython-311-darwin.so"",
    ""name"" : ""binascii.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522135552,
    ""size"" : 32768,
    ""uuid"" : ""3cd6c3fb-9fe0-3b14-a169-570d6d72caba"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_struct.cpython-311-darwin.so"",
    ""name"" : ""_struct.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522233856,
    ""size"" : 16384,
    ""uuid"" : ""57e65ad6-c0ea-38d8-a056-41ad88aa2610"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/fcntl.cpython-311-darwin.so"",
    ""name"" : ""fcntl.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522971136,
    ""size"" : 16384,
    ""uuid"" : ""463cc059-41c7-330e-b20b-05cb0fdcad11"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_posixsubprocess.cpython-311-darwin.so"",
    ""name"" : ""_posixsubprocess.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522811392,
    ""size"" : 32768,
    ""uuid"" : ""fab56287-4c23-300d-9887-cd45a5f7d3a7"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/select.cpython-311-darwin.so"",
    ""name"" : ""select.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4522893312,
    ""size"" : 16384,
    ""uuid"" : ""968f7d44-5fa3-31d9-8b22-92eb2206cc84"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/_arrays.cpython-311-darwin.so"",
    ""name"" : ""_arrays.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4527460352,
    ""size"" : 1130496,
    ""uuid"" : ""248383d9-36c6-3353-bbce-8dcc6b4ce8f7"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/arrays\/lib\/libarrays.dylib"",
    ""name"" : ""libarrays.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4525666304,
    ""size"" : 32768,
    ""uuid"" : ""c77a08cd-9e75-30d9-84cc-a69845c1c3ec"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_json.cpython-311-darwin.so"",
    ""name"" : ""_json.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4545527808,
    ""size"" : 4931584,
    ""uuid"" : ""2b00c859-0a9f-3caf-b744-6c2225d80f2b"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_umath.cpython-311-darwin.so"",
    ""name"" : ""_multiarray_umath.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4618915840,
    ""size"" : 64094208,
    ""uuid"" : ""9d768904-ac4b-327d-8126-cec11a08b966"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libopenblas64_.0.dylib"",
    ""name"" : ""libopenblas64_.0.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4558790656,
    ""size"" : 6565888,
    ""uuid"" : ""ae37c55e-f850-3cf7-86e4-bbd86809bc1d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgfortran.5.dylib"",
    ""name"" : ""libgfortran.5.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4528771072,
    ""size"" : 319488,
    ""uuid"" : ""a1783d23-d187-3d92-ade7-2a80619e7485"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libquadmath.0.dylib"",
    ""name"" : ""libquadmath.0.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4526796800,
    ""size"" : 69632,
    ""uuid"" : ""6d59656e-a224-3642-80b9-ca07ca06e7c1"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/.dylibs\/libgcc_s.1.1.dylib"",
    ""name"" : ""libgcc_s.1.1.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4525469696,
    ""size"" : 114688,
    ""uuid"" : ""6078491a-679a-38fb-99f9-93212e36864a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_pickle.cpython-311-darwin.so"",
    ""name"" : ""_pickle.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4527091712,
    ""size"" : 16384,
    ""uuid"" : ""b62770cf-9a42-3e1b-8e2d-bc816ac0e837"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_contextvars.cpython-311-darwin.so"",
    ""name"" : ""_contextvars.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4530176000,
    ""size"" : 81920,
    ""uuid"" : ""639e25c9-cea2-3d74-b5c2-849e946bcc2a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/core\/_multiarray_tests.cpython-311-darwin.so"",
    ""name"" : ""_multiarray_tests.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4527157248,
    ""size"" : 81920,
    ""uuid"" : ""14c5a954-5a10-341d-930e-646b8183499c"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ctypes.cpython-311-darwin.so"",
    ""name"" : ""_ctypes.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4539187200,
    ""size"" : 131072,
    ""uuid"" : ""b1cb953c-267f-3883-a539-bdcd0ec454a9"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/linalg\/_umath_linalg.cpython-311-darwin.so"",
    ""name"" : ""_umath_linalg.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4531404800,
    ""size"" : 81920,
    ""uuid"" : ""98efd1f3-eca0-387f-bcde-bddf9588e58b"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/fft\/_pocketfft_internal.cpython-311-darwin.so"",
    ""name"" : ""_pocketfft_internal.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4541325312,
    ""size"" : 475136,
    ""uuid"" : ""540847df-9827-358d-99cf-88c3e8d2b851"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/mtrand.cpython-311-darwin.so"",
    ""name"" : ""mtrand.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4540739584,
    ""size"" : 131072,
    ""uuid"" : ""6edf4fc8-aedc-3490-8d35-cea9228e02b1"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/bit_generator.cpython-311-darwin.so"",
    ""name"" : ""bit_generator.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4542529536,
    ""size"" : 196608,
    ""uuid"" : ""af2bead6-eea9-3b15-bc85-d48eae168228"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_common.cpython-311-darwin.so"",
    ""name"" : ""_common.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4526936064,
    ""size"" : 32768,
    ""uuid"" : ""a5bc2ee2-086d-3ee9-8f96-3f9a55d29897"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_hashlib.cpython-311-darwin.so"",
    ""name"" : ""_hashlib.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4599148544,
    ""size"" : 2260992,
    ""uuid"" : ""8365300e-480c-3c4d-9ca6-539638c6704e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libcrypto.1.1.dylib"",
    ""name"" : ""libcrypto.1.1.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4527337472,
    ""size"" : 32768,
    ""uuid"" : ""350317ec-40ef-3786-8235-1f4a252e2bdf"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_blake2.cpython-311-darwin.so"",
    ""name"" : ""_blake2.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4543385600,
    ""size"" : 344064,
    ""uuid"" : ""28fb5ca7-d743-37b2-ada0-3e2f189421cc"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_bounded_integers.cpython-311-darwin.so"",
    ""name"" : ""_bounded_integers.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4540465152,
    ""size"" : 65536,
    ""uuid"" : ""ef897ac7-3b50-30b3-90dd-67ed8d383413"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_mt19937.cpython-311-darwin.so"",
    ""name"" : ""_mt19937.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4541018112,
    ""size"" : 49152,
    ""uuid"" : ""295d00ff-9980-30db-b256-d03255300066"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_philox.cpython-311-darwin.so"",
    ""name"" : ""_philox.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4541149184,
    ""size"" : 65536,
    ""uuid"" : ""aa144ed2-2766-3453-8242-ba1c7a85b8be"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_pcg64.cpython-311-darwin.so"",
    ""name"" : ""_pcg64.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4531634176,
    ""size"" : 32768,
    ""uuid"" : ""c5fdf54a-82e5-35a0-a1f6-b53c802ba054"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_sfc64.cpython-311-darwin.so"",
    ""name"" : ""_sfc64.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4551999488,
    ""size"" : 589824,
    ""uuid"" : ""c0f2136b-dde6-3728-92f0-57d0f47098f1"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/numpy\/random\/_generator.cpython-311-darwin.so"",
    ""name"" : ""_generator.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4531535872,
    ""size"" : 16384,
    ""uuid"" : ""f68fca4b-5b9f-3986-91bf-f334ea86eead"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_opcode.cpython-311-darwin.so"",
    ""name"" : ""_opcode.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4542210048,
    ""size"" : 147456,
    ""uuid"" : ""2c719e3d-a419-3692-a578-2819f3d838f6"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/geometry\/_geometry.cpython-311-darwin.so"",
    ""name"" : ""_geometry.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4609601536,
    ""size"" : 1589248,
    ""uuid"" : ""2be8100b-aa99-3117-95ff-0200ddc4032f"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtCore.abi3.so"",
    ""name"" : ""QtCore.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4786556928,
    ""size"" : 5259264,
    ""uuid"" : ""35b47b1c-6952-3d39-a5e7-711f3ca228f2"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtCore.framework\/Versions\/A\/QtCore"",
    ""name"" : ""QtCore""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4543119360,
    ""size"" : 98304,
    ""uuid"" : ""17a32d1b-857d-3264-9bf6-9192cca7beb2"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/sip.cpython-311-darwin.so"",
    ""name"" : ""sip.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4603113472,
    ""size"" : 2801664,
    ""uuid"" : ""babd94e3-ec19-3110-ab5b-11c39432d8c5"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWidgets.abi3.so"",
    ""name"" : ""QtWidgets.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4829437952,
    ""size"" : 4964352,
    ""uuid"" : ""f36760e5-d1e7-3a93-ae8c-1c3e55e3fc35"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWidgets.framework\/Versions\/A\/QtWidgets"",
    ""name"" : ""QtWidgets""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4844003328,
    ""size"" : 6979584,
    ""uuid"" : ""49d915f7-1c6d-3bbd-b96f-064260e7d998"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtGui.framework\/Versions\/A\/QtGui"",
    ""name"" : ""QtGui""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4614041600,
    ""size"" : 573440,
    ""uuid"" : ""b80d4b57-c2b5-329a-8f0b-fa6745f22ad0"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtDBus.framework\/Versions\/A\/QtDBus"",
    ""name"" : ""QtDBus""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4614762496,
    ""size"" : 1474560,
    ""uuid"" : ""86bbe80d-1a98-3bdb-b3c7-eee8ee9c9f07"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtGui.abi3.so"",
    ""name"" : ""QtGui.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4545298432,
    ""size"" : 65536,
    ""uuid"" : ""31527197-e015-3323-9b1e-d89a57f4122b"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineWidgets.abi3.so"",
    ""name"" : ""QtWebEngineWidgets.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4558274560,
    ""size"" : 81920,
    ""uuid"" : ""be9b28e7-5ac2-3b5d-9c1e-9cb326210166"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineWidgets.framework\/Versions\/A\/QtWebEngineWidgets"",
    ""name"" : ""QtWebEngineWidgets""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4618170368,
    ""size"" : 311296,
    ""uuid"" : ""4a13ff65-e0b7-341f-ac9d-bb5df92cb106"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPrintSupport.framework\/Versions\/A\/QtPrintSupport"",
    ""name"" : ""QtPrintSupport""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5027176448,
    ""size"" : 165052416,
    ""uuid"" : ""4aa1de3e-464c-340c-ab61-bcd39bfc7658"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebEngineCore.framework\/Versions\/A\/QtWebEngineCore"",
    ""name"" : ""QtWebEngineCore""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4852211712,
    ""size"" : 4079616,
    ""uuid"" : ""e586fcd9-f4b6-3610-a075-167f962121c5"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuick.framework\/Versions\/A\/QtQuick"",
    ""name"" : ""QtQuick""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4826198016,
    ""size"" : 425984,
    ""uuid"" : ""3081c960-3da0-328b-8a70-a5cc2464636c"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGL.framework\/Versions\/A\/QtOpenGL"",
    ""name"" : ""QtOpenGL""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4827561984,
    ""size"" : 557056,
    ""uuid"" : ""b83cee7d-31bd-3264-99ce-afa3bf6692c5"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQmlModels.framework\/Versions\/A\/QtQmlModels"",
    ""name"" : ""QtQmlModels""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4558454784,
    ""size"" : 212992,
    ""uuid"" : ""795a00a0-138d-33c2-b582-5fd530b0c678"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtWebChannel.framework\/Versions\/A\/QtWebChannel"",
    ""name"" : ""QtWebChannel""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4857733120,
    ""size"" : 4079616,
    ""uuid"" : ""b140050b-a3f5-340b-a110-d1c01906c469"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQml.framework\/Versions\/A\/QtQml"",
    ""name"" : ""QtQml""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4837416960,
    ""size"" : 1261568,
    ""uuid"" : ""f402edbd-ac12-3e53-a2f4-e1d6932ab755"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtNetwork.framework\/Versions\/A\/QtNetwork"",
    ""name"" : ""QtNetwork""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4826820608,
    ""size"" : 491520,
    ""uuid"" : ""92f7a6de-79af-3b2f-8548-97e6556c3d1a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtPositioning.framework\/Versions\/A\/QtPositioning"",
    ""name"" : ""QtPositioning""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4613320704,
    ""size"" : 81920,
    ""uuid"" : ""5b40aee8-76af-3deb-9c1b-90894adda30a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtQuickWidgets.framework\/Versions\/A\/QtQuickWidgets"",
    ""name"" : ""QtQuickWidgets""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4545196032,
    ""size"" : 32768,
    ""uuid"" : ""4125538e-4145-3504-8c4c-eecafa43ae17"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebChannel.abi3.so"",
    ""name"" : ""QtWebChannel.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4835827712,
    ""size"" : 458752,
    ""uuid"" : ""398c4f3b-e41e-3c01-8003-a594b5bc7701"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtNetwork.abi3.so"",
    ""name"" : ""QtNetwork.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4828315648,
    ""size"" : 196608,
    ""uuid"" : ""87e0d2fb-a12c-38ca-b451-0bf21cc5d3ed"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtWebEngineCore.abi3.so"",
    ""name"" : ""QtWebEngineCore.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4613500928,
    ""size"" : 147456,
    ""uuid"" : ""5b8ebe3c-b7e4-3d4b-950c-fbb3a6870826"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtPrintSupport.abi3.so"",
    ""name"" : ""QtPrintSupport.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4840439808,
    ""size"" : 655360,
    ""uuid"" : ""4bf756eb-ff87-3f7f-8c98-b1eda6463b81"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/platforms\/libqcocoa.dylib"",
    ""name"" : ""libqcocoa.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64h"",
    ""base"" : 4889346048,
    ""CFBundleShortVersionString"" : ""4.14.1"",
    ""CFBundleIdentifier"" : ""com.apple.AMDRadeonX4000GLDriver"",
    ""size"" : 1179648,
    ""uuid"" : ""cd6fb642-a4b6-3233-af7e-a0de064bbe0b"",
    ""path"" : ""\/System\/Library\/Extensions\/AMDRadeonX4000GLDriver.bundle\/Contents\/MacOS\/AMDRadeonX4000GLDriver"",
    ""name"" : ""AMDRadeonX4000GLDriver"",
    ""CFBundleVersion"" : ""4.1.4""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4839530496,
    ""size"" : 163840,
    ""uuid"" : ""a600179c-3d08-331c-ba58-5134eada0b7e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/styles\/libqmacstyle.dylib"",
    ""name"" : ""libqmacstyle.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4836974592,
    ""size"" : 180224,
    ""uuid"" : ""6f66f2fb-3370-3449-8c56-f3e0001309af"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/pyexpat.cpython-311-darwin.so"",
    ""name"" : ""pyexpat.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4837253120,
    ""size"" : 65536,
    ""uuid"" : ""f5077020-095f-37b5-9841-9db3e15f3401"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_socket.cpython-311-darwin.so"",
    ""name"" : ""_socket.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4840050688,
    ""size"" : 49152,
    ""uuid"" : ""434ffdf5-a119-33d1-8f61-ae50457a3d17"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/array.cpython-311-darwin.so"",
    ""name"" : ""array.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4609531904,
    ""size"" : 16384,
    ""uuid"" : ""dc7e074f-ad98-3934-aa21-85389e14162e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_heapq.cpython-311-darwin.so"",
    ""name"" : ""_heapq.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4618817536,
    ""size"" : 16384,
    ""uuid"" : ""e81a2322-9755-3b07-b226-bdaa988e1f3b"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_queue.cpython-311-darwin.so"",
    ""name"" : ""_queue.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4827459584,
    ""size"" : 16384,
    ""uuid"" : ""1ab11cdf-f450-33b0-9055-0ec26fb654ee"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/grp.cpython-311-darwin.so"",
    ""name"" : ""grp.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4840165376,
    ""size"" : 32768,
    ""uuid"" : ""3b8f35f8-8f33-355e-a956-2cc5d0d96c32"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_csv.cpython-311-darwin.so"",
    ""name"" : ""_csv.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4839948288,
    ""size"" : 16384,
    ""uuid"" : ""d0ba4ed3-33c4-30c0-9fb8-0fcdd129cd4a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/_load_libs.cpython-311-darwin.so"",
    ""name"" : ""_load_libs.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4912631808,
    ""size"" : 1196032,
    ""uuid"" : ""146fbaf9-e571-37ea-8b91-518dd53f8d03"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libatomstruct.dylib"",
    ""name"" : ""libatomstruct.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4839792640,
    ""size"" : 32768,
    ""uuid"" : ""88a748b9-8a16-3bfc-ba85-a21a2e8d0dfe"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libelement.dylib"",
    ""name"" : ""libelement.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4843937792,
    ""size"" : 16384,
    ""uuid"" : ""3edbdaff-bca7-3dde-878a-d25fb44e9018"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic_lib\/lib\/libpyinstance.dylib"",
    ""name"" : ""libpyinstance.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4888862720,
    ""size"" : 212992,
    ""uuid"" : ""a9496e39-cd88-3974-aafc-ff947534f4db"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/libmolc.dylib"",
    ""name"" : ""libmolc.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4910157824,
    ""size"" : 360448,
    ""uuid"" : ""618ec769-18aa-37be-b55b-7e22658dae7d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cymol.cpython-311-darwin.so"",
    ""name"" : ""cymol.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4909428736,
    ""size"" : 114688,
    ""uuid"" : ""60d71170-122f-3388-8946-9dc82b508714"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/tinyarray.cpython-311-darwin.so"",
    ""name"" : ""tinyarray.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4909219840,
    ""size"" : 49152,
    ""uuid"" : ""23a4fb23-e7ad-3f20-b2e5-b03ac4a6886e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/cytmpl.cpython-311-darwin.so"",
    ""name"" : ""cytmpl.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4840312832,
    ""size"" : 16384,
    ""uuid"" : ""5c82e5f4-7664-3325-95c1-a2286b531838"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/_load_libs.cpython-311-darwin.so"",
    ""name"" : ""_load_libs.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4909674496,
    ""size"" : 32768,
    ""uuid"" : ""9c20a913-80f2-3790-82d6-f5f257f40a80"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb_lib\/lib\/libpdbconnect.dylib"",
    ""name"" : ""libpdbconnect.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4908933120,
    ""size"" : 98304,
    ""uuid"" : ""6e842008-31d0-3b82-a669-7322afd7ff18"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_ssl.cpython-311-darwin.so"",
    ""name"" : ""_ssl.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4911845376,
    ""size"" : 393216,
    ""uuid"" : ""107f31ab-cd24-32ef-bf63-11caf2bb17d4"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/libssl.1.1.dylib"",
    ""name"" : ""libssl.1.1.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4909146112,
    ""size"" : 16384,
    ""uuid"" : ""5b50f1d9-e783-35c3-af9f-373c9c20ca6c"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_scproxy.cpython-311-darwin.so"",
    ""name"" : ""_scproxy.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4909772800,
    ""size"" : 180224,
    ""uuid"" : ""51e1e878-bbc5-3f02-b917-b1ff75adab8e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/surface\/_surface.cpython-311-darwin.so"",
    ""name"" : ""_surface.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4919205888,
    ""size"" : 671744,
    ""uuid"" : ""99f6a3dc-9f85-3a3d-8ee5-4560b2308969"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/map\/_map.cpython-311-darwin.so"",
    ""name"" : ""_map.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4909350912,
    ""size"" : 16384,
    ""uuid"" : ""143bfd0a-fbaa-3849-bbaa-9d3b2d44c38f"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md.cpython-311-darwin.so"",
    ""name"" : ""md.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4920074240,
    ""size"" : 147456,
    ""uuid"" : ""d1f6d0b1-d05a-3cc7-8c15-0d72176e5bcb"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/charset_normalizer\/md__mypyc.cpython-311-darwin.so"",
    ""name"" : ""md__mypyc.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4922728448,
    ""size"" : 1114112,
    ""uuid"" : ""aff872ee-6078-3910-b105-cc0517b99c83"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/unicodedata.cpython-311-darwin.so"",
    ""name"" : ""unicodedata.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4912451584,
    ""size"" : 32768,
    ""uuid"" : ""114c9a33-5736-3368-9202-8fbccd595edd"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_multibytecodec.cpython-311-darwin.so"",
    ""name"" : ""_multibytecodec.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4910067712,
    ""size"" : 16384,
    ""uuid"" : ""05968841-a7ae-3fcd-965c-8cc9e98e0a41"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_uuid.cpython-311-darwin.so"",
    ""name"" : ""_uuid.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4918759424,
    ""size"" : 278528,
    ""uuid"" : ""60db207e-61fc-34bd-b11c-5cfa79eea3b7"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/_decimal.cpython-311-darwin.so"",
    ""name"" : ""_decimal.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4924493824,
    ""size"" : 393216,
    ""uuid"" : ""d2838c07-3bac-3b2d-87c3-72aded2e5165"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imaging.cpython-311-darwin.so"",
    ""name"" : ""_imaging.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4925841408,
    ""size"" : 655360,
    ""uuid"" : ""eb2b7b54-aae9-33c5-ad3a-429b3a4f72ad"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libtiff.6.dylib"",
    ""name"" : ""libtiff.6.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4927422464,
    ""size"" : 737280,
    ""uuid"" : ""52bfa0ae-b59c-3f4e-8240-645c1a930cc1"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libjpeg.62.4.0.dylib"",
    ""name"" : ""libjpeg.62.4.0.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4926611456,
    ""size"" : 557056,
    ""uuid"" : ""d015dfe5-7214-33d8-bf58-350dd32c4521"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libopenjp2.2.5.0.dylib"",
    ""name"" : ""libopenjp2.2.5.0.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4923908096,
    ""size"" : 131072,
    ""uuid"" : ""181a76df-c680-311c-aaa6-6eeeb8854129"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libz.1.3.dylib"",
    ""name"" : ""libz.1.3.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4924088320,
    ""size"" : 163840,
    ""uuid"" : ""51065206-aff2-32dd-93c5-d6d05a6f5e35"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libxcb.1.1.0.dylib"",
    ""name"" : ""libxcb.1.1.0.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4925394944,
    ""size"" : 245760,
    ""uuid"" : ""2f03407e-0f9b-3146-b009-33e0f793869a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/liblzma.5.dylib"",
    ""name"" : ""liblzma.5.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4912549888,
    ""size"" : 16384,
    ""uuid"" : ""adabaf7c-bc6a-3eab-8fbc-f3d8fdd20c3e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/.dylibs\/libXau.6.0.0.dylib"",
    ""name"" : ""libXau.6.0.0.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4922593280,
    ""size"" : 16384,
    ""uuid"" : ""6471263b-077e-389e-bb71-0c6152f93a06"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/lib-dynload\/termios.cpython-311-darwin.so"",
    ""name"" : ""termios.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4922433536,
    ""size"" : 16384,
    ""uuid"" : ""ab1ede05-8390-3ffd-92d7-7ce53a7c9be2"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_c_internal_utils.cpython-311-darwin.so"",
    ""name"" : ""_c_internal_utils.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4933484544,
    ""size"" : 131072,
    ""uuid"" : ""ff530dfd-f9a0-3647-8791-e3141a233416"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_path.cpython-311-darwin.so"",
    ""name"" : ""_path.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4935606272,
    ""size"" : 671744,
    ""uuid"" : ""3ff53eba-e1c5-3012-8833-8f274ca1f445"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/ft2font.cpython-311-darwin.so"",
    ""name"" : ""ft2font.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4934729728,
    ""size"" : 98304,
    ""uuid"" : ""b95403ec-ebee-307e-a234-a98fa49425bf"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/kiwisolver\/_cext.cpython-311-darwin.so"",
    ""name"" : ""_cext.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4934975488,
    ""size"" : 163840,
    ""uuid"" : ""aef34ee9-c864-3f86-9c23-674b05a8f622"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/matplotlib\/_image.cpython-311-darwin.so"",
    ""name"" : ""_image.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4947709952,
    ""size"" : 704512,
    ""uuid"" : ""a4ad5b64-7236-3230-857c-bc3c882c9b69"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGL.abi3.so"",
    ""name"" : ""QtOpenGL.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4925706240,
    ""size"" : 49152,
    ""uuid"" : ""f299aa93-affb-3200-ba08-9d3d8c6da134"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/QtOpenGLWidgets.abi3.so"",
    ""name"" : ""QtOpenGLWidgets.abi3.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4924366848,
    ""size"" : 32768,
    ""uuid"" : ""4e4bafab-4516-3b13-9719-e3642c80791e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtOpenGLWidgets.framework\/Versions\/A\/QtOpenGLWidgets"",
    ""name"" : ""QtOpenGLWidgets""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4925181952,
    ""size"" : 32768,
    ""uuid"" : ""2e49f12e-2bd1-36ff-a452-6af1ad840335"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/errorchecker.cpython-311-darwin.so"",
    ""name"" : ""errorchecker.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4946976768,
    ""size"" : 163840,
    ""uuid"" : ""84c28449-2886-395e-a902-73f67264df32"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/arraydatatype.cpython-311-darwin.so"",
    ""name"" : ""arraydatatype.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4947304448,
    ""size"" : 180224,
    ""uuid"" : ""d98e7117-18dd-37b7-9c74-472d0c79861a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/wrapper.cpython-311-darwin.so"",
    ""name"" : ""wrapper.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4927250432,
    ""size"" : 32768,
    ""uuid"" : ""1936789e-b9b0-3e1f-8cfa-fc88f0803ad5"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/formathandler.cpython-311-darwin.so"",
    ""name"" : ""formathandler.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4925280256,
    ""size"" : 32768,
    ""uuid"" : ""ada3a7a8-1026-3b4a-9d87-6fce8df2fb33"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/latebind.cpython-311-darwin.so"",
    ""name"" : ""latebind.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4954345472,
    ""size"" : 98304,
    ""uuid"" : ""7927d573-a75a-3483-b846-b34afb8cd28d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/vbo.cpython-311-darwin.so"",
    ""name"" : ""vbo.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4925083648,
    ""size"" : 32768,
    ""uuid"" : ""79131285-478a-3db6-a280-53666b87c3a7"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqgif.dylib"",
    ""name"" : ""libqgif.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4935303168,
    ""size"" : 49152,
    ""uuid"" : ""6fa7f1f6-f0d8-3c40-bcba-c9efedd60ea4"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqicns.dylib"",
    ""name"" : ""libqicns.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4935204864,
    ""size"" : 32768,
    ""uuid"" : ""db9371e6-1f91-3bb7-b809-279e47d8ddf6"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqico.dylib"",
    ""name"" : ""libqico.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4955074560,
    ""size"" : 458752,
    ""uuid"" : ""9ae20c42-01c8-33fe-9659-3452efdaa18b"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqjpeg.dylib"",
    ""name"" : ""libqjpeg.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4935401472,
    ""size"" : 32768,
    ""uuid"" : ""986394df-4589-3b8d-9ea9-f6f1e56f1b5e"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqmacheif.dylib"",
    ""name"" : ""libqmacheif.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4935483392,
    ""size"" : 32768,
    ""uuid"" : ""1e969447-e94a-32a1-9213-d22fc6f91912"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqmacjp2.dylib"",
    ""name"" : ""libqmacjp2.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4954558464,
    ""size"" : 32768,
    ""uuid"" : ""5e0161ca-ceec-363f-8779-78f703b77183"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqsvg.dylib"",
    ""name"" : ""libqsvg.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4955598848,
    ""size"" : 245760,
    ""uuid"" : ""b664e91f-c9aa-3e4d-a93a-9600b9e093d2"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/lib\/QtSvg.framework\/Versions\/A\/QtSvg"",
    ""name"" : ""QtSvg""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4954640384,
    ""size"" : 32768,
    ""uuid"" : ""ea65a913-faaa-3a98-9152-8f5cb46cefe2"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqtga.dylib"",
    ""name"" : ""libqtga.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4956454912,
    ""size"" : 425984,
    ""uuid"" : ""c1d9cbcb-157d-3efb-b925-47d5b0aa636a"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqtiff.dylib"",
    ""name"" : ""libqtiff.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4954722304,
    ""size"" : 32768,
    ""uuid"" : ""4555e0fe-0041-3b9d-a56b-13b66a6d3148"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqwbmp.dylib"",
    ""name"" : ""libqwbmp.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4957597696,
    ""size"" : 573440,
    ""uuid"" : ""607364f1-42f7-3d00-a4e8-3d3930973dee"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PyQt6\/Qt6\/plugins\/imageformats\/libqwebp.dylib"",
    ""name"" : ""libqwebp.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64h"",
    ""base"" : 4957368320,
    ""size"" : 65536,
    ""uuid"" : ""5eaf78f9-49d0-30e2-a516-d53697b7344a"",
    ""path"" : ""\/usr\/lib\/libobjc-trampolines.dylib"",
    ""name"" : ""libobjc-trampolines.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 4922658816,
    ""size"" : 16384,
    ""uuid"" : ""136e83be-523c-3e0a-8ee9-ac44338f577c"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/core\/_mac_util.cpython-311-darwin.so"",
    ""name"" : ""_mac_util.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5327454208,
    ""CFBundleShortVersionString"" : ""3.0"",
    ""CFBundleIdentifier"" : ""com.apple.security.csparser"",
    ""size"" : 98304,
    ""uuid"" : ""a8633311-4cf5-328a-9409-8a6723be0656"",
    ""path"" : ""\/System\/Library\/Frameworks\/Security.framework\/Versions\/A\/PlugIns\/csparser.bundle\/Contents\/MacOS\/csparser"",
    ""name"" : ""csparser"",
    ""CFBundleVersion"" : ""60420.140.26.703.3""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5330067456,
    ""size"" : 65536,
    ""uuid"" : ""5cfe15a5-c7e4-36db-be9c-4d4ef3728796"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/numpy_formathandler.cpython-311-darwin.so"",
    ""name"" : ""numpy_formathandler.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5332877312,
    ""size"" : 32768,
    ""uuid"" : ""20c4af3a-4b84-3cc8-aa82-b08768c1116d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/OpenGL_accelerate\/nones_formathandler.cpython-311-darwin.so"",
    ""name"" : ""nones_formathandler.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5336416256,
    ""size"" : 180224,
    ""uuid"" : ""8a2cb9a5-a78b-3570-85dd-db8d007fb652"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/pdb\/_pdbio.cpython-311-darwin.so"",
    ""name"" : ""_pdbio.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5336170496,
    ""size"" : 81920,
    ""uuid"" : ""77e92d9f-9046-3830-af22-fd3e061a9760"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/atomic\/_ribbons.cpython-311-darwin.so"",
    ""name"" : ""_ribbons.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5336014848,
    ""size"" : 32768,
    ""uuid"" : ""3b76dfeb-802d-3ce8-9151-7ec4ff5a682b"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/graphics\/_graphics.cpython-311-darwin.so"",
    ""name"" : ""_graphics.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5337776128,
    ""size"" : 409600,
    ""uuid"" : ""bb420b20-0ce5-3d6c-95cc-09f401a8b63d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/mmcif.cpython-311-darwin.so"",
    ""name"" : ""mmcif.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5362319360,
    ""size"" : 442368,
    ""uuid"" : ""4257e585-b0ce-343b-bd19-71ac7ffa0713"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/mmcif\/_mmcif.cpython-311-darwin.so"",
    ""name"" : ""_mmcif.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5680738304,
    ""size"" : 16384,
    ""uuid"" : ""67c108ea-3b9a-3731-a794-8ca4049035a3"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/_sw.cpython-311-darwin.so"",
    ""name"" : ""_sw.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5680803840,
    ""size"" : 16384,
    ""uuid"" : ""0cf88116-cc85-32ed-b523-593e852fc25f"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/libalign_algs.dylib"",
    ""name"" : ""libalign_algs.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5681713152,
    ""size"" : 16384,
    ""uuid"" : ""ce412e76-387f-357d-b7be-b4654bc453d4"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/dssp\/_dssp.cpython-311-darwin.so"",
    ""name"" : ""_dssp.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5681422336,
    ""size"" : 32768,
    ""uuid"" : ""6174b67e-2ac1-346b-ad21-d6fb32060963"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/chimerax\/alignment_algs\/_nw.cpython-311-darwin.so"",
    ""name"" : ""_nw.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 5722845184,
    ""size"" : 32768,
    ""uuid"" : ""4cafbf15-47c9-3e93-abf0-7f8f01ea6b1d"",
    ""path"" : ""\/Applications\/ChimeraX-1.7.1.app\/Contents\/Library\/Frameworks\/Python.framework\/Versions\/3.11\/lib\/python3.11\/site-packages\/PIL\/_imagingmath.cpython-311-darwin.so"",
    ""name"" : ""_imagingmath.cpython-311-darwin.so""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703432929280,
    ""size"" : 237568,
    ""uuid"" : ""e8790d29-4132-3edf-ab37-16fbd7cf0d66"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_kernel.dylib"",
    ""name"" : ""libsystem_kernel.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703433166848,
    ""size"" : 49152,
    ""uuid"" : ""60b15e1f-39ea-33a1-8616-3af57dc1094a"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_pthread.dylib"",
    ""name"" : ""libsystem_pthread.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703431778304,
    ""size"" : 557048,
    ""uuid"" : ""a720129c-c1cf-3e62-9d76-aa6fa0d31333"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_c.dylib"",
    ""name"" : ""libsystem_c.dylib""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703433363456,
    ""size"" : 40944,
    ""uuid"" : ""982c4eec-b380-3c37-ab95-14150e14dd61"",
    ""path"" : ""\/usr\/lib\/system\/libsystem_platform.dylib"",
    ""name"" : ""libsystem_platform.dylib""
  },
  {
    ""size"" : 0,
    ""source"" : ""A"",
    ""base"" : 0,
    ""uuid"" : ""00000000-0000-0000-0000-000000000000""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703484809216,
    ""CFBundleShortVersionString"" : ""6.9"",
    ""CFBundleIdentifier"" : ""com.apple.AppKit"",
    ""size"" : 16814080,
    ""uuid"" : ""f66bd32d-b52d-3eff-8d5c-48d0f7189785"",
    ""path"" : ""\/System\/Library\/Frameworks\/AppKit.framework\/Versions\/C\/AppKit"",
    ""name"" : ""AppKit"",
    ""CFBundleVersion"" : ""2299.77.138""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703595933696,
    ""CFBundleShortVersionString"" : ""2.1.1"",
    ""CFBundleIdentifier"" : ""com.apple.HIToolbox"",
    ""size"" : 3112954,
    ""uuid"" : ""1afba695-4d4c-3b3e-9911-92f50c585ba4"",
    ""path"" : ""\/System\/Library\/Frameworks\/Carbon.framework\/Versions\/A\/Frameworks\/HIToolbox.framework\/Versions\/A\/HIToolbox"",
    ""name"" : ""HIToolbox""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64"",
    ""base"" : 140703429648384,
    ""size"" : 623536,
    ""uuid"" : ""2b649d59-89d8-3db6-9ba4-a6aecba42f6e"",
    ""path"" : ""\/usr\/lib\/dyld"",
    ""name"" : ""dyld""
  },
  {
    ""source"" : ""P"",
    ""arch"" : ""x86_64h"",
    ""base"" : 140703433580544,
    ""CFBundleShortVersionString"" : ""6.9"",
    ""CFBundleIdentifier"" : ""com.apple.CoreFoundation"",
    ""size"" : 4837360,
    ""uuid"" : ""3435a4a4-d0f8-3399-b0ad-49c3635a0f61"",
    ""path"" : ""\/System\/Library\/Frameworks\/CoreFoundation.framework\/Versions\/A\/CoreFoundation"",
    ""name"" : ""CoreFoundation"",
    ""CFBundleVersion"" : ""1979.104""
  }
],
  ""sharedCache"" : {
  ""base"" : 140703429025792,
  ""size"" : 21474836480,
  ""uuid"" : ""774caf66-b420-37ec-a8ec-8d92014cbfbc""
},
  ""vmSummary"" : ""ReadOnly portion of Libraries: Total=1.1G resident=0K(0%) swapped_out_or_unallocated=1.1G(100%)\nWritable regions: Total=2.1G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=2.1G(100%)\n\n                                VIRTUAL   REGION \nREGION TYPE                        SIZE    COUNT (non-coalesced) \n===========                     =======  ======= \nAccelerate framework               256K        2 \nActivity Tracing                   256K        1 \nCG backing stores                 6720K        8 \nCG image                          2032K       49 \nCG raster data                    1072K        1 \nColorSync                          264K       30 \nCoreAnimation                     5616K       68 \nCoreGraphics                        16K        3 \nCoreGraphics (reserved)             16K        2         reserved VM address space (unallocated)\nCoreUI image data                 5256K       40 \nFoundation                          32K        2 \nKernel Alloc Once                    8K        1 \nMALLOC                             1.5G      808 \nMALLOC guard page                   32K        8 \nMALLOC_LARGE (reserved)            384K        1         reserved VM address space (unallocated)\nMALLOC_NANO (reserved)           128.0M        1         reserved VM address space (unallocated)\nMach message                        16K        2 \nOpenGL GLSL                        384K        4 \nSTACK GUARD                        112K       28 \nStack                            157.2M       29 \nStack Guard                       56.0M        1 \nVM_ALLOCATE                      288.6M      231 \nVM_ALLOCATE (reserved)            32.0M        1         reserved VM address space (unallocated)\n__CTF                               824        1 \n__DATA                            49.0M      774 \n__DATA_CONST                      52.3M      401 \n__DATA_DIRTY                      1812K      229 \n__FONT_DATA                        2352        1 \n__GLSLBUILTINS                    5174K        1 \n__INFO_FILTER                         8        1 \n__LINKEDIT                       203.2M      151 \n__OBJC_RO                         66.3M        1 \n__OBJC_RW                         2013K        2 \n__TEXT                           931.1M      779 \ndyld private memory                420K        4 \nmapped file                      251.5M       66 \nshared memory                     3032K       37 \n===========                     =======  ======= \nTOTAL                              3.7G     3769 \nTOTAL, minus reserved VM space     3.6G     3769 \n"",
  ""legacyInfo"" : {
  ""threadTriggered"" : {
    ""name"" : ""CrBrowserMain"",
    ""queue"" : ""com.apple.main-thread""
  }
},
  ""logWritingSignature"" : ""02eb6428faed1687b5d3b48a8b662f62b419b591"",
  ""trialInfo"" : {
  ""rollouts"" : [
    {
      ""rolloutId"" : ""5fb4245a1bbfe8005e33a1e1"",
      ""factorPackIds"" : {

      },
      ""deploymentId"" : 240000021
    },
    {
      ""rolloutId"" : ""6425c75e4327780c10cc4252"",
      ""factorPackIds"" : {
        ""SIRI_HOME_AUTOMATION_INTENT_SELECTION_CACHE"" : ""642600a457e7664b1698eb32""
      },
      ""deploymentId"" : 240000004
    }
  ],
  ""experiments"" : [
    {
      ""treatmentId"" : ""c47ab4cc-c9c3-4b5d-a87c-e2433ce02597"",
      ""experimentId"" : ""6639bc6ba73d460582162323"",
      ""deploymentId"" : 400000006
    },
    {
      ""treatmentId"" : ""45f4e2a5-551b-4bc2-a2dc-19c244dda8f8"",
      ""experimentId"" : ""6643969b3099cf28e049862f"",
      ""deploymentId"" : 400000007
    }
  ]
}
}
===== Log before crash start =====
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.7.1 (2024-01-23)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  

> open
> /Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set2/RealSpaceRefine_107/Combine_W15_107_mod-
> coot-2.pdb

Chain information for Combine_W15_107_mod-coot-2.pdb #1  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
H | No description available  
L | No description available  
  

> hide atoms

> show cartoons

> lighting simple

> open 3e6p

3e6p title:  
Crystal structure of human meizothrombin desF1 [more info...]  
  
Chain information for 3e6p #2  
---  
Chain | Description | UniProt  
H | Prothrombin | THRB_HUMAN 16-247  
L | Prothrombin | THRB_HUMAN 163-415  
  
Non-standard residues in 3e6p #2  
---  
DFK —
D-phenylalanyl-N-[(1S)-4-{[(Z)-amino(imino)methyl]amino}-1-(chloroacetyl)butyl]-L-prolinamide
(D-phenylalanyl-prolyl-arginyl-chloromethane)  
NA — sodium ion  
NAG — 2-acetamido-2-deoxy-beta-D-glucopyranose (N-acetyl-beta-D-glucosamine;
2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose;
2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE)  
SO4 — sulfate ion  
  

> ui tool show Matchmaker

> matchmaker #!2 to #1

Parameters  
---  
Chain pairing | bb  
Alignment algorithm | Needleman-Wunsch  
Similarity matrix | BLOSUM-62  
SS fraction | 0.3  
Gap open (HH/SS/other) | 18/18/6  
Gap extend | 1  
SS matrix |  |  | H | S | O  
---|---|---|---  
H | 6 | -9 | -6  
S |  | 6 | -6  
O |  |  | 4  
Iteration cutoff | 2  
  
Matchmaker Combine_W15_107_mod-coot-2.pdb, chain H (#1) with 3e6p, chain H
(#2), sequence alignment score = 1228.6  
RMSD between 184 pruned atom pairs is 1.233 angstroms; (across all 251 pairs:
1.862)  
  

> open ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set4
> /Combine_W15_set4.pdb""

Chain information for Combine_W15_set4.pdb #3  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
F | No description available  
H | No description available  
L | No description available  
M | No description available  
  

> hide #!1 models

> hide #!2 models

> hide #!3 atoms

> show #!3 cartoons

> open
> /Users/boskostojanovski/Desktop/Phenix/RealSpaceRefine_112/Combine_W15_set4_real_space_refined_112.pdb

Chain information for Combine_W15_set4_real_space_refined_112.pdb #4  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
F | No description available  
H | No description available  
L | No description available  
M | No description available  
  

> hide #!3 models

> hide #!4 atoms

> show #!4 cartoons

> show #!1 models

> show #!2 models

> hide #!2 models

> hide #!1 models

> show #!2 models

> close #1

> close #2

> close #3

> close #4

> open
> ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set3/Combined
> set/Phenix/RealSpaceRefine_111/Combine_W15_set3__real_space_refined_111.pdb""

Chain information for Combine_W15_set3__real_space_refined_111.pdb #1  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
F | No description available  
H | No description available  
L | No description available  
  

> hide atoms

> show cartoons

> lighting simple

> select /B

10735 atoms, 11027 bonds, 1 pseudobond, 1325 residues, 2 models selected  

> delete atoms (#!1 & sel)

> delete bonds (#!1 & sel)

> select /D

1852 atoms, 1894 bonds, 234 residues, 1 model selected  

> delete atoms sel

> delete bonds sel

> select /F

75 atoms, 74 bonds, 10 residues, 1 model selected  

> delete atoms sel

> delete bonds sel

> select /E

676 atoms, 692 bonds, 90 residues, 1 model selected  

> delete atoms sel

> delete bonds sel

> open ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/starting
> map/comp_1348+1349_DEEP_W15.mrc""

Opened comp_1348+1349_DEEP_W15.mrc as #2, grid size 400,400,400, pixel 0.842,
shown at level -0.000637, step 2, values float32  

> save /Users/boskostojanovski/Desktop/3e6p_fromset3.pdb relModel #2

> close #1

> open
> /Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set2/RealSpaceRefine_107/Combine_W15_107_mod-
> coot-2.pdb

Chain information for Combine_W15_107_mod-coot-2.pdb #1  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
H | No description available  
L | No description available  
  

> hide atoms

> show cartoons

> hide #!2 models

> select /B

10735 atoms, 11027 bonds, 1 pseudobond, 1325 residues, 2 models selected  

> delete atoms (#!1 & sel)

> delete bonds (#!1 & sel)

> select /D

1852 atoms, 1894 bonds, 234 residues, 1 model selected  

> delete atoms sel

> delete bonds sel

> select /L

846 atoms, 867 bonds, 1 pseudobond, 107 residues, 2 models selected  

> select /E

676 atoms, 692 bonds, 90 residues, 1 model selected  

> delete atoms sel

> delete bonds sel

> save ""/Users/boskostojanovski/Desktop/MzDES For
> Refinements/3e6p_fromset2.pdb"" relModel #2

> open
> ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set3/Combined
> set/Coot/Combine_W15_set3_-coot-0.pdb""

Combine_W15_set3_-coot-0.pdb title:  
Crystal structure of human thrombin mutant S195A In complex with the
extracellular fragment of human PAR1 [more info...]  
  
Chain information for Combine_W15_set3_-coot-0.pdb #3  
---  
Chain | Description | UniProt  
B | prothrombin |  
D | prothrombin |  
E | prothrombin |  
F | proteinase-activated receptor 1 | PAR1_HUMAN 33-57  
H | No description available |  
L | No description available |  
  
Non-standard residues in Combine_W15_set3_-coot-0.pdb #3  
---  
BHD — (BHD)  
  

> hide atoms

> show cartoons

> hide #!3 models

> show #!3 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #!1 models

> show #!2 models

> volume #2 step 1

> volume #2 level 0.1

> volume #2 color #b2b2b299

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> hide #!2 models

> show #!2 models

> hide #!2 models

> show #!2 models

> show #!1 models

> hide #!2 models

> show #!2 models

> hide #!1 models

> show #!1 models

> hide #!1 models

> hide #!2 models

> show #!2 models

> open
> /Users/boskostojanovski/Desktop/Phenix/RealSpaceRefine_113/3e6p_fromset3_real_space_refined_113.pdb

Chain information for 3e6p_fromset3_real_space_refined_113.pdb #4  
---  
Chain | Description  
H | No description available  
L | No description available  
  

> hide #!3 models

> show #!1 models

> color #4 #ff40ffff

> show #!3 models

> open
> ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set3/Combined
> set/Coot/Combine_W15_set3_-coot-1.pdb""

Combine_W15_set3_-coot-1.pdb title:  
Crystal structure of human thrombin mutant S195A In complex with the
extracellular fragment of human PAR1 [more info...]  
  
Chain information for Combine_W15_set3_-coot-1.pdb #5  
---  
Chain | Description | UniProt  
B | prothrombin |  
D | prothrombin |  
E | prothrombin |  
F | proteinase-activated receptor 1 | PAR1_HUMAN 33-57  
H | No description available |  
L | No description available |  
  
Non-standard residues in Combine_W15_set3_-coot-1.pdb #5  
---  
BHD — (BHD)  
  

> hide atoms

> show cartoons

> hide #!2 models

> hide #!3 models

> hide #!4 models

> show #!3 models

> open
> ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set3/Combined
> set/Combine_W15_set3_.pdb""

Combine_W15_set3_.pdb title:  
Crystal structure of human thrombin mutant S195A In complex with the
extracellular fragment of human PAR1 [more info...]  
  
Chain information for Combine_W15_set3_.pdb #6  
---  
Chain | Description | UniProt  
B | prothrombin |  
D | prothrombin |  
E | prothrombin |  
F | proteinase-activated receptor 1 | PAR1_HUMAN 33-57  
H | No description available |  
L | No description available |  
  
Non-standard residues in Combine_W15_set3_.pdb #6  
---  
BHD — (BHD)  
  

> hide #!1,3,5-6 atoms

> show #!1,3,5-6 cartoons

> hide #!6 models

> show #!6 models

> hide #!6 models

> show #!6 models

> hide #!6 models

> show #!6 models

> hide #!3 models

> hide #!5 models

> show #!2 models

> hide #!6 models

> show #!6 models

> hide #!6 models

> show #!6 models

> hide #!6 models

> show #!6 models

> hide #!6 models

> show #!6 models

> show #!1,6 atoms

> style #!1,6 stick

Changed 19226 atom styles  

> hide #!1,6 atoms

> hide #!2 models

> show #!2 models

> hide #!1 models

> show #!1 models

> hide #!2 models

> close #5

> close #4

> close #3

> hide #!6 models

> show #!6 models

> hide #!1 models

> ui tool show ""Show Sequence Viewer""

> sequence chain #6/L

Alignment identifier is 6/L  

> select #6/L:414G

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select #6/L:414G-414L

51 atoms, 51 bonds, 6 residues, 1 model selected  

> select #6/L:277

12 atoms, 12 bonds, 1 residue, 1 model selected  

> select #6/L:277-286,401,401A,401B,401C,401D,401E,401F,402-414L

347 atoms, 354 bonds, 42 residues, 1 model selected  

> select ~sel & ##selected

16003 atoms, 16428 bonds, 3 pseudobonds, 1992 residues, 2 models selected  

> delete atoms (#!6 & sel)

> delete bonds (#!6 & sel)

> show #!1 models

> select add #6

347 atoms, 354 bonds, 42 residues, 1 model selected  

> ui mousemode right ""rotate selected models""

> view matrix models
> #6,0.99863,-0.019385,-0.048518,13.994,0.018601,0.99969,-0.016561,-0.10043,0.048824,0.015636,0.99868,-12.119

> undo

> view matrix models #6,1,0,0,0.61941,0,1,0,1.3359,0,0,1,0.28046

> view matrix models
> #6,0.99955,-0.015978,-0.025472,8.9802,0.015556,0.99974,-0.016709,1.8513,0.025733,0.016305,0.99954,-7.6358

> view matrix models
> #6,0.99987,-0.013824,0.0080505,1.4956,0.01379,0.9999,0.0042047,-2.2161,-0.0081078,-0.0040932,0.99996,2.6223

> view matrix models
> #6,0.99987,-0.013824,0.0080505,1.7307,0.01379,0.9999,0.0042047,-2.1601,-0.0081078,-0.0040932,0.99996,2.7359

> show #!2 models

> hide #!6 models

> show #!6 models

> select subtract #6

Nothing selected  

> hide #!6 models

> show #!6 models

> hide #!2 models

> ui tool show ""Show Sequence Viewer""

> select add #1

2876 atoms, 2952 bonds, 2 pseudobonds, 358 residues, 2 models selected  

> select subtract #1

Nothing selected  

> select add #1

2876 atoms, 2952 bonds, 2 pseudobonds, 358 residues, 2 models selected  

> select subtract #1

Nothing selected  

> hide #!1 models

> show #!1 models

> close #1

> open
> /Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set2/RealSpaceRefine_107/Combine_W15_107_mod-
> coot-2.pdb

Chain information for Combine_W15_107_mod-coot-2.pdb #1  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
H | No description available  
L | No description available  
  

> hide atoms

> show cartoons

> ui tool show ""Show Sequence Viewer""

> sequence chain #1/L

Alignment identifier is 1/L  

> select #1/L:414L

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select #1/L:242-414L

289 atoms, 292 bonds, 1 pseudobond, 34 residues, 2 models selected  

> select #1/L:414L

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select #1/L:242-414L

289 atoms, 292 bonds, 1 pseudobond, 34 residues, 2 models selected  

> select #1/L:414L

8 atoms, 7 bonds, 1 residue, 1 model selected  

> select #1/L:247-414L

247 atoms, 249 bonds, 1 pseudobond, 29 residues, 2 models selected  

> select #1/L:240

11 atoms, 11 bonds, 1 residue, 1 model selected  

> select #1/L:240-242

27 atoms, 28 bonds, 3 residues, 1 model selected  

> select #1/L:414K-414L

16 atoms, 15 bonds, 2 residues, 1 model selected  

> select #1/L:402-414L

211 atoms, 213 bonds, 25 residues, 1 model selected  

> delete atoms sel

> delete bonds sel

> hide #!1 models

> hide #!6 models

> open ""/Users/boskostojanovski/Desktop/Models/W15/PDBs for
> Coot/PAR1-coot-3.pdb""

Summary of feedback from opening
/Users/boskostojanovski/Desktop/Models/W15/PDBs for Coot/PAR1-coot-3.pdb  
---  
warnings | Start residue of secondary structure not found: HELIX 1 1 THR F 34
LEU F 38 1 5  
Start residue of secondary structure not found: SHEET 1 1 1 ASP F 39 PRO F 40
0  
  
PAR1-coot-3.pdb title:  
Crystal structure of human thrombin mutant S195A In complex with the
extracellular fragment of human PAR1 [more info...]  
  
Chain information for PAR1-coot-3.pdb #3  
---  
Chain | Description | UniProt  
F | proteinase-activated receptor 1 | PAR1_HUMAN 33-57  
  

> show #!2 models

> hide #3 models

> show #!1 models

> hide #!2 models

> show #3 models

> show #!6 models

> show #!2 models

> combine #1,3,6

Remapping chain ID 'L' in Combine_W15_set3_.pdb #6 to 'M'  

> hide #!6 models

> hide #3 models

> hide #!2 models

> show #!2 models

> save
> /Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set5/combine_W15_set5.pdb
> models #4 relModel #2

> close #2

> close #1

> close #3

> close #4

> close #6

> open
> /Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set5/combine_W15_set5.pdb

combine_W15_set5.pdb title:  
Crystal structure of human thrombin mutant S195A In complex with the
extracellular fragment of human PAR1 [more info...]  
  
Chain information for combine_W15_set5.pdb #1  
---  
Chain | Description | UniProt  
B | prothrombin |  
D | prothrombin |  
E | prothrombin |  
F | proteinase-activated receptor 1 | PAR1_HUMAN 33-57  
H | No description available |  
L | No description available |  
M | No description available |  
  
Non-standard residues in combine_W15_set5.pdb #1  
---  
BHD — (BHD)  
  

> hide atoms

> show cartoons

> lighting simple

> open
> /Users/boskostojanovski/Desktop/Phenix/RealSpaceRefine_114/combine_W15_set5_real_space_refined_114.pdb

Chain information for combine_W15_set5_real_space_refined_114.pdb #2  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
F | No description available  
H | No description available  
L | No description available  
M | No description available  
  

> hide atoms

> show cartoons

> hide #!2 models

> show #!2 models

> open ""/Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/starting
> map/comp_1348+1349_DEEP_W15.mrc""

Opened comp_1348+1349_DEEP_W15.mrc as #3, grid size 400,400,400, pixel 0.842,
shown at level -0.000637, step 2, values float32  

> volume #3 step 1

> volume #3 level 0.1

> volume #3 color #b2b2b299

> hide #!1 models

> show #!1 models

> hide #!1 models

> show #!2 atoms

> style #!2 stick

Changed 16350 atom styles  

> hide #!2 atoms

> show #!2 atoms

> hide #!2 atoms

> open
> /Users/boskostojanovski/Desktop/DES_PTse_COOT/0.DEEP_W15/Combine_set5/Coot/combine_W15_set5_real_space_refined_114-coot-0.pdb

Chain information for combine_W15_set5_real_space_refined_114-coot-0.pdb #4  
---  
Chain | Description  
B | No description available  
D | No description available  
E | No description available  
F | No description available  
H | No description available  
L | No description available  
M | No description available  
  

> close #1

> hide #!2 models

> hide #!3 models

> hide #!4 atoms

> show #!4 cartoons


===== Log before crash end =====

Log:
Startup Messages  
---  
note | available bundle cache has not been initialized yet  
  
UCSF ChimeraX version: 1.7.1 (2024-01-23)  
© 2016-2023 Regents of the University of California. All rights reserved.  
How to cite UCSF ChimeraX  




OpenGL version: 4.1 ATI-4.14.1
OpenGL renderer: AMD Radeon Pro 575 OpenGL Engine
OpenGL vendor: ATI Technologies Inc.

Python: 3.11.2
Locale: UTF-8
Qt version: PyQt6 6.3.1, Qt 6.3.1
Qt runtime version: 6.3.2
Qt platform: cocoa
Hardware:

    Hardware Overview:

      Model Name: iMac
      Model Identifier: iMac18,3
      Processor Name: Quad-Core Intel Core i5
      Processor Speed: 3.5 GHz
      Number of Processors: 1
      Total Number of Cores: 4
      L2 Cache (per Core): 256 KB
      L3 Cache: 6 MB
      Memory: 16 GB
      System Firmware Version: 529.140.2.0.0
      OS Loader Version: 577.140.2~22
      SMC Version (system): 2.41f2

Software:

    System Software Overview:

      System Version: macOS 13.6.9 (22G830)
      Kernel Version: Darwin 22.6.0
      Time since boot: 19 days, 22 hours, 24 minutes

Graphics/Displays:

    Radeon Pro 575:

      Chipset Model: Radeon Pro 575
      Type: GPU
      Bus: PCIe
      PCIe Lane Width: x16
      VRAM (Total): 4 GB
      Vendor: AMD (0x1002)
      Device ID: 0x67df
      Revision ID: 0x00c4
      ROM Revision: 113-D000AA-931
      VBIOS Version: 113-D0001A1P-025
      EFI Driver Version: 01.00.931
      Metal Support: Metal 2
      Displays:
        iMac:
          Display Type: Built-In Retina LCD
          Resolution: Retina 5K (5120 x 2880)
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Main Display: Yes
          Mirror: Off
          Online: Yes
          Automatically Adjust Brightness: Yes
          Connection Type: Internal
        LG UltraFine:
          Resolution: 3840 x 2160 (2160p/4K UHD 1 - Ultra High Definition)
          UI Looks like: 1920 x 1080 @ 60.00Hz
          Framebuffer Depth: 30-Bit Color (ARGB2101010)
          Display Serial Number: 201NTRLKF070
          Mirror: Off
          Online: Yes
          Rotation: Supported
          Automatically Adjust Brightness: Yes
          Connection Type: Thunderbolt/DisplayPort


Installed Packages:
    alabaster: 0.7.16
    appdirs: 1.4.4
    appnope: 0.1.3
    asttokens: 2.4.1
    Babel: 2.14.0
    backcall: 0.2.0
    beautifulsoup4: 4.11.2
    blockdiag: 3.0.0
    blosc2: 2.0.0
    build: 0.10.0
    certifi: 2022.12.7
    cftime: 1.6.3
    charset-normalizer: 3.3.2
    ChimeraX-AddCharge: 1.5.13
    ChimeraX-AddH: 2.2.5
    ChimeraX-AlignmentAlgorithms: 2.0.1
    ChimeraX-AlignmentHdrs: 3.4.1
    ChimeraX-AlignmentMatrices: 2.1
    ChimeraX-Alignments: 2.12.2
    ChimeraX-AlphaFold: 1.0
    ChimeraX-AltlocExplorer: 1.1.1
    ChimeraX-AmberInfo: 1.0
    ChimeraX-Arrays: 1.1
    ChimeraX-Atomic: 1.49.1
    ChimeraX-AtomicLibrary: 12.1.5
    ChimeraX-AtomSearch: 2.0.1
    ChimeraX-AxesPlanes: 2.3.2
    ChimeraX-BasicActions: 1.1.2
    ChimeraX-BILD: 1.0
    ChimeraX-BlastProtein: 2.1.2
    ChimeraX-BondRot: 2.0.4
    ChimeraX-BugReporter: 1.0.1
    ChimeraX-BuildStructure: 2.10.5
    ChimeraX-Bumps: 1.0
    ChimeraX-BundleBuilder: 1.2.2
    ChimeraX-ButtonPanel: 1.0.1
    ChimeraX-CageBuilder: 1.0.1
    ChimeraX-CellPack: 1.0
    ChimeraX-Centroids: 1.3.2
    ChimeraX-ChangeChains: 1.1
    ChimeraX-CheckWaters: 1.3.2
    ChimeraX-ChemGroup: 2.0.1
    ChimeraX-Clashes: 2.2.4
    ChimeraX-ColorActions: 1.0.3
    ChimeraX-ColorGlobe: 1.0
    ChimeraX-ColorKey: 1.5.5
    ChimeraX-CommandLine: 1.2.5
    ChimeraX-ConnectStructure: 2.0.1
    ChimeraX-Contacts: 1.0.1
    ChimeraX-Core: 1.7.1
    ChimeraX-CoreFormats: 1.2
    ChimeraX-coulombic: 1.4.2
    ChimeraX-Crosslinks: 1.0
    ChimeraX-Crystal: 1.0
    ChimeraX-CrystalContacts: 1.0.1
    ChimeraX-DataFormats: 1.2.3
    ChimeraX-Dicom: 1.2
    ChimeraX-DistMonitor: 1.4
    ChimeraX-DockPrep: 1.1.3
    ChimeraX-Dssp: 2.0
    ChimeraX-EMDB-SFF: 1.0
    ChimeraX-ESMFold: 1.0
    ChimeraX-FileHistory: 1.0.1
    ChimeraX-FunctionKey: 1.0.1
    ChimeraX-Geometry: 1.3
    ChimeraX-gltf: 1.0
    ChimeraX-Graphics: 1.1.1
    ChimeraX-Hbonds: 2.4
    ChimeraX-Help: 1.2.2
    ChimeraX-HKCage: 1.3
    ChimeraX-IHM: 1.1
    ChimeraX-ImageFormats: 1.2
    ChimeraX-IMOD: 1.0
    ChimeraX-IO: 1.0.1
    ChimeraX-ItemsInspection: 1.0.1
    ChimeraX-IUPAC: 1.0
    ChimeraX-Label: 1.1.8
    ChimeraX-ListInfo: 1.2.2
    ChimeraX-Log: 1.1.6
    ChimeraX-LookingGlass: 1.1
    ChimeraX-Maestro: 1.9.1
    ChimeraX-Map: 1.1.4
    ChimeraX-MapData: 2.0
    ChimeraX-MapEraser: 1.0.1
    ChimeraX-MapFilter: 2.0.1
    ChimeraX-MapFit: 2.0
    ChimeraX-MapSeries: 2.1.1
    ChimeraX-Markers: 1.0.1
    ChimeraX-Mask: 1.0.2
    ChimeraX-MatchMaker: 2.1.2
    ChimeraX-MCopy: 1.0
    ChimeraX-MDcrds: 2.6.1
    ChimeraX-MedicalToolbar: 1.0.2
    ChimeraX-Meeting: 1.0.1
    ChimeraX-MLP: 1.1.1
    ChimeraX-mmCIF: 2.12.1
    ChimeraX-MMTF: 2.2
    ChimeraX-Modeller: 1.5.14
    ChimeraX-ModelPanel: 1.4
    ChimeraX-ModelSeries: 1.0.1
    ChimeraX-Mol2: 2.0.3
    ChimeraX-Mole: 1.0
    ChimeraX-Morph: 1.0.2
    ChimeraX-MouseModes: 1.2
    ChimeraX-Movie: 1.0
    ChimeraX-Neuron: 1.0
    ChimeraX-Nifti: 1.1
    ChimeraX-NRRD: 1.1
    ChimeraX-Nucleotides: 2.0.3
    ChimeraX-OpenCommand: 1.13.1
    ChimeraX-PDB: 2.7.3
    ChimeraX-PDBBio: 1.0.1
    ChimeraX-PDBLibrary: 1.0.4
    ChimeraX-PDBMatrices: 1.0
    ChimeraX-PickBlobs: 1.0.1
    ChimeraX-Positions: 1.0
    ChimeraX-PresetMgr: 1.1
    ChimeraX-PubChem: 2.1
    ChimeraX-ReadPbonds: 1.0.1
    ChimeraX-Registration: 1.1.2
    ChimeraX-RemoteControl: 1.0
    ChimeraX-RenderByAttr: 1.1
    ChimeraX-RenumberResidues: 1.1
    ChimeraX-ResidueFit: 1.0.1
    ChimeraX-RestServer: 1.2
    ChimeraX-RNALayout: 1.0
    ChimeraX-RotamerLibMgr: 4.0
    ChimeraX-RotamerLibsDunbrack: 2.0
    ChimeraX-RotamerLibsDynameomics: 2.0
    ChimeraX-RotamerLibsRichardson: 2.0
    ChimeraX-SaveCommand: 1.5.1
    ChimeraX-SchemeMgr: 1.0
    ChimeraX-SDF: 2.0.2
    ChimeraX-Segger: 1.0
    ChimeraX-Segment: 1.0.1
    ChimeraX-SelInspector: 1.0
    ChimeraX-SeqView: 2.11
    ChimeraX-Shape: 1.0.1
    ChimeraX-Shell: 1.0.1
    ChimeraX-Shortcuts: 1.1.1
    ChimeraX-ShowSequences: 1.0.2
    ChimeraX-SideView: 1.0.1
    ChimeraX-Smiles: 2.1.2
    ChimeraX-SmoothLines: 1.0
    ChimeraX-SpaceNavigator: 1.0
    ChimeraX-StdCommands: 1.12.4
    ChimeraX-STL: 1.0.1
    ChimeraX-Storm: 1.0
    ChimeraX-StructMeasure: 1.1.2
    ChimeraX-Struts: 1.0.1
    ChimeraX-Surface: 1.0.1
    ChimeraX-SwapAA: 2.0.1
    ChimeraX-SwapRes: 2.2.2
    ChimeraX-TapeMeasure: 1.0
    ChimeraX-TaskManager: 1.0
    ChimeraX-Test: 1.0
    ChimeraX-Toolbar: 1.1.2
    ChimeraX-ToolshedUtils: 1.2.4
    ChimeraX-Topography: 1.0
    ChimeraX-ToQuest: 1.0
    ChimeraX-Tug: 1.0.1
    ChimeraX-UI: 1.33.3
    ChimeraX-uniprot: 2.3
    ChimeraX-UnitCell: 1.0.1
    ChimeraX-ViewDockX: 1.3.2
    ChimeraX-VIPERdb: 1.0
    ChimeraX-Vive: 1.1
    ChimeraX-VolumeMenu: 1.0.1
    ChimeraX-vrml: 1.0
    ChimeraX-VTK: 1.0
    ChimeraX-WavefrontOBJ: 1.0
    ChimeraX-WebCam: 1.0.2
    ChimeraX-WebServices: 1.1.3
    ChimeraX-Zone: 1.0.1
    colorama: 0.4.6
    comm: 0.2.1
    contourpy: 1.2.0
    cxservices: 1.2.2
    cycler: 0.12.1
    Cython: 0.29.33
    debugpy: 1.8.0
    decorator: 5.1.1
    docutils: 0.19
    executing: 2.0.1
    filelock: 3.9.0
    fonttools: 4.47.2
    funcparserlib: 2.0.0a0
    glfw: 2.6.4
    grako: 3.16.5
    h5py: 3.10.0
    html2text: 2020.1.16
    idna: 3.6
    ihm: 0.38
    imagecodecs: 2023.9.18
    imagesize: 1.4.1
    ipykernel: 6.23.2
    ipython: 8.14.0
    ipython-genutils: 0.2.0
    ipywidgets: 8.1.1
    jedi: 0.18.2
    Jinja2: 3.1.2
    jupyter-client: 8.2.0
    jupyter-core: 5.7.1
    jupyterlab-widgets: 3.0.9
    kiwisolver: 1.4.5
    line-profiler: 4.0.2
    lxml: 4.9.2
    lz4: 4.3.2
    MarkupSafe: 2.1.4
    matplotlib: 3.7.2
    matplotlib-inline: 0.1.6
    msgpack: 1.0.4
    nest-asyncio: 1.6.0
    netCDF4: 1.6.2
    networkx: 3.1
    nibabel: 5.0.1
    nptyping: 2.5.0
    numexpr: 2.8.8
    numpy: 1.25.1
    openvr: 1.23.701
    packaging: 21.3
    ParmEd: 3.4.3
    parso: 0.8.3
    pep517: 0.13.0
    pexpect: 4.9.0
    pickleshare: 0.7.5
    pillow: 10.2.0
    pip: 23.0
    pkginfo: 1.9.6
    platformdirs: 4.1.0
    prompt-toolkit: 3.0.43
    psutil: 5.9.5
    ptyprocess: 0.7.0
    pure-eval: 0.2.2
    py-cpuinfo: 9.0.0
    pycollada: 0.7.2
    pydicom: 2.3.0
    Pygments: 2.16.1
    pynrrd: 1.0.0
    PyOpenGL: 3.1.7
    PyOpenGL-accelerate: 3.1.7
    pyopenxr: 1.0.2801
    pyparsing: 3.0.9
    pyproject-hooks: 1.0.0
    PyQt6-commercial: 6.3.1
    PyQt6-Qt6: 6.3.2
    PyQt6-sip: 13.4.0
    PyQt6-WebEngine-commercial: 6.3.1
    PyQt6-WebEngine-Qt6: 6.3.2
    python-dateutil: 2.8.2
    pytz: 2023.3.post1
    pyzmq: 25.1.2
    qtconsole: 5.4.3
    QtPy: 2.4.1
    RandomWords: 0.4.0
    requests: 2.31.0
    scipy: 1.11.1
    setuptools: 67.4.0
    setuptools-scm: 7.0.5
    sfftk-rw: 0.7.3
    six: 1.16.0
    snowballstemmer: 2.2.0
    sortedcontainers: 2.4.0
    soupsieve: 2.5
    sphinx: 6.1.3
    sphinx-autodoc-typehints: 1.22
    sphinxcontrib-applehelp: 1.0.8
    sphinxcontrib-blockdiag: 3.0.0
    sphinxcontrib-devhelp: 1.0.6
    sphinxcontrib-htmlhelp: 2.0.5
    sphinxcontrib-jsmath: 1.0.1
    sphinxcontrib-qthelp: 1.0.7
    sphinxcontrib-serializinghtml: 1.1.10
    stack-data: 0.6.3
    superqt: 0.5.0
    tables: 3.8.0
    tcia-utils: 1.5.1
    tifffile: 2023.7.18
    tinyarray: 1.2.4
    tomli: 2.0.1
    tornado: 6.4
    traitlets: 5.9.0
    typing-extensions: 4.9.0
    tzdata: 2023.4
    urllib3: 2.1.0
    wcwidth: 0.2.13
    webcolors: 1.12
    wheel: 0.38.4
    wheel-filename: 1.4.1
    widgetsnbextension: 4.0.9
}}}
"	defect	closed	normal		Core		duplicate		Tom Goddard				all	ChimeraX
