id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 15072 Crash setting active window lp212@… Eric Pettersen "{{{ The following bug report has been submitted: Platform: macOS-10.15.7-x86_64-i386-64bit ChimeraX Version: 1.7.1 (2024-01-23 01:58:08 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. Process: ChimeraX [3408] Path: /Applications/ChimeraX-1.7.1.app/Contents/MacOS/ChimeraX Identifier: edu.ucsf.cgl.ChimeraX Version: 1.7.1 (1.7.1.0) Code Type: X86-64 (Native) Parent Process: ??? [1] Responsible: ChimeraX [3408] User ID: 501 Date/Time: 2024-04-30 15:15:41.604 +0100 OS Version: Mac OS X 10.15.7 (19H1824) Report Version: 12 Anonymous UUID: 00793036-5073-2795-E567-3396AEE1EF13 Sleep/Wake UUID: 363F591F-8E92-4110-BF0D-384BE48D87AB Time Awake Since Boot: 49000 seconds Time Since Wake: 5500 seconds System Integrity Protection: enabled Crashed Thread: 0 CrBrowserMain Dispatch queue: com.apple.main-thread Exception Type: EXC_BAD_ACCESS (SIGSEGV) Exception Codes: KERN_INVALID_ADDRESS at 0x0000000000000040 Exception Note: EXC_CORPSE_NOTIFY VM Regions Near 0x40: --> __TEXT 0000000105c6d000-0000000105c71000 [ 16K] r-x/r-x SM=COW /Applications/ChimeraX-1.7.1.app/Contents/MacOS/ChimeraX Thread 0 Crashed:: CrBrowserMain Dispatch queue: com.apple.main-thread 0 libsystem_kernel.dylib 0x00007fff7324932a __pthread_kill + 10 1 libsystem_pthread.dylib 0x00007fff73305e60 pthread_kill + 430 2 libsystem_c.dylib 0x00007fff7316093e raise + 26 3 org.python.python 0x0000000105efb5d4 faulthandler_fatal_error + 388 4 libsystem_platform.dylib 0x00007fff732fa5fd _sigtramp + 29 5 ??? 000000000000000000 0 + 0 6 libqcocoa.dylib 0x000000012c8a22db 0x12c875000 + 185051 7 libqcocoa.dylib 0x000000012c8a096d 0x12c875000 + 178541 8 QtCore 0x000000011306b022 0x112fad000 + 778274 9 QtGui 0x000000012013450e QGuiApplicationPrivate::processActivatedEvent(QWindowSystemInterfacePrivate::ActivatedWindowEvent*) + 942 10 QtGui 0x000000012018cd7c 0x1200ad000 + 916860 11 libqcocoa.dylib 0x000000012c8d7ad7 0x12c875000 + 404183 12 com.apple.AppKit 0x00007fff369db70f -[NSWindow _realMakeFirstResponder:] + 415 13 libqcocoa.dylib 0x000000012c8c28af 0x12c875000 + 317615 14 QtWidgets 0x000000011fa9f93c QApplicationPrivate::setFocusWidget(QWidget*, Qt::FocusReason) + 188 15 QtWidgets 0x000000011faef9ed QWidget::setFocus(Qt::FocusReason) + 621 16 QtWidgets 0x000000011faa0949 QApplication::setActiveWindow(QWidget*) + 1081 17 QtWidgets 0x000000011faa0d7f QApplicationPrivate::notifyActiveWindowChange(QWindow*) + 47 18 QtGui 0x00000001201343eb QGuiApplicationPrivate::processActivatedEvent(QWindowSystemInterfacePrivate::ActivatedWindowEvent*) + 651 19 QtGui 0x000000012018cd7c 0x1200ad000 + 916860 20 QtCore 0x000000011302a614 QMetaMethod::invoke(QObject*, Qt::ConnectionType, QGenericReturnArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument, QGenericArgument) const + 1284 21 libqcocoa.dylib 0x000000012c8c4a6c 0x12c875000 + 326252 22 com.apple.Foundation 0x00007fff3bc8c094 -[__NSObserver _doit:] + 296 23 com.apple.CoreFoundation 0x00007fff3961014f __CFNOTIFICATIONCENTER_IS_CALLING_OUT_TO_AN_OBSERVER__ + 12 24 com.apple.CoreFoundation 0x00007fff396100e3 ___CFXRegistrationPost1_block_invoke + 63 25 com.apple.CoreFoundation 0x00007fff39610058 _CFXRegistrationPost1 + 372 26 com.apple.CoreFoundation 0x00007fff3960fcc4 ___CFXNotificationPost_block_invoke + 80 27 com.apple.CoreFoundation 0x00007fff395dfe2d -[_CFXNotificationRegistrar find:object:observer:enumerator:] + 1554 28 com.apple.CoreFoundation 0x00007fff395df2d9 _CFXNotificationPost + 1351 29 com.apple.Foundation 0x00007fff3bc60096 -[NSNotificationCenter postNotificationName:object:userInfo:] + 59 30 com.apple.AppKit 0x00007fff36a679e5 -[NSWindow becomeKeyWindow] + 1276 31 com.apple.AppKit 0x00007fff369ea61b -[NSWindow _changeKeyAndMainLimitedOK:] + 963 32 com.apple.AppKit 0x00007fff36ac86ac -[NSWindow(NSEventRouting) _handleMouseDownEvent:isDelayedEvent:] + 3742 33 com.apple.AppKit 0x00007fff36a33371 -[NSWindow(NSEventRouting) _reallySendEvent:isDelayedEvent:] + 2612 34 com.apple.AppKit 0x00007fff36a32719 -[NSWindow(NSEventRouting) sendEvent:] + 349 35 libqcocoa.dylib 0x000000012c8ebb4f 0x12c875000 + 486223 36 com.apple.AppKit 0x00007fff36a30aa4 -[NSApplication(NSEvent) sendEvent:] + 352 37 libqcocoa.dylib 0x000000012c88040a 0x12c875000 + 46090 38 com.apple.AppKit 0x00007fff3687dbdf -[NSApplication run] + 707 39 libqcocoa.dylib 0x000000012c88e0ac 0x12c875000 + 102572 40 QtCore 0x0000000113024326 QEventLoop::exec(QFlags) + 486 41 QtCore 0x000000011301b235 QCoreApplication::exec() + 133 42 QtWidgets.abi3.so 0x000000011f6aad9a meth_QApplication_exec(_object*, _object*) + 90 43 org.python.python 0x0000000105d8e7ea cfunction_call + 90 44 org.python.python 0x0000000105d293b1 _PyObject_MakeTpCall + 129 45 org.python.python 0x0000000105e573e7 _PyEval_EvalFrameDefault + 60455 46 org.python.python 0x0000000105e4747a PyEval_EvalCode + 282 47 org.python.python 0x0000000105e41ce3 builtin_exec + 483 48 org.python.python 0x0000000105d8f144 cfunction_vectorcall_FASTCALL_KEYWORDS + 68 49 org.python.python 0x0000000105e572ef _PyEval_EvalFrameDefault + 60207 50 org.python.python 0x0000000105e5d4d0 _PyEval_Vector + 128 51 org.python.python 0x0000000105ef46fd pymain_run_module + 253 52 org.python.python 0x0000000105ef41c1 Py_RunMain + 2225 53 org.python.python 0x0000000105ef517b pymain_main + 43 54 org.python.python 0x0000000105ef514a Py_Main + 42 55 edu.ucsf.cgl.ChimeraX 0x0000000105c70d9a main + 122 56 libdyld.dylib 0x00007fff73101cc9 start + 1 Thread 1: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 libopenblas64_.0.dylib 0x00000001075fd67f blas_thread_server + 207 3 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 4 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 2: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 libopenblas64_.0.dylib 0x00000001075fd67f blas_thread_server + 207 3 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 4 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 3: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 libopenblas64_.0.dylib 0x00000001075fd67f blas_thread_server + 207 3 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 4 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 4: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 libopenblas64_.0.dylib 0x00000001075fd67f blas_thread_server + 207 3 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 4 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 5: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 libopenblas64_.0.dylib 0x00000001075fd67f blas_thread_server + 207 3 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 4 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 6: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 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66059960 6 QtWebEngineCore 0x0000000124d242ad 0x120e3d000 + 65958573 7 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 8 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 9 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 10 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 9:: ThreadPoolBackgroundWorker 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d307bf 0x120e3d000 + 66009023 4 QtWebEngineCore 0x0000000124d3126c 0x120e3d000 + 66011756 5 QtWebEngineCore 0x0000000124d30ddd 0x120e3d000 + 66010589 6 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 7 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 10:: Chrome_IOThread 0 libsystem_kernel.dylib 0x00007fff7324bb86 kevent64 + 10 1 QtWebEngineCore 0x0000000124d9da2a 0x120e3d000 + 66456106 2 QtWebEngineCore 0x0000000124d9d927 0x120e3d000 + 66455847 3 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 4 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 5 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 6 QtWebEngineCore 0x0000000123c623a2 0x120e3d000 + 48386978 7 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 8 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 9 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 10 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 11:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d6bbef 0x120e3d000 + 66251759 4 QtWebEngineCore 0x0000000124ca11c9 0x120e3d000 + 65421769 5 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 6 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 7 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 8 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 9 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 10 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 11 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 12:: CompositorTileWorker1 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 QtWebEngineCore 0x0000000124d63d1b 0x120e3d000 + 66219291 3 QtWebEngineCore 0x0000000126e3192d 0x120e3d000 + 100616493 4 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 5 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 6 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 13:: Chrome_InProcGpuThread 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124ca1168 0x120e3d000 + 65421672 4 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 5 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 6 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 7 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 8 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 9 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 10 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 14:: Chrome_ChildIOThread 0 libsystem_kernel.dylib 0x00007fff7324bb86 kevent64 + 10 1 QtWebEngineCore 0x0000000124d9da2a 0x120e3d000 + 66456106 2 QtWebEngineCore 0x0000000124d9d927 0x120e3d000 + 66455847 3 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 4 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 5 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 6 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 7 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 8 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 15:: VizCompositorThread 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d6bbef 0x120e3d000 + 66251759 4 QtWebEngineCore 0x0000000124ca11c9 0x120e3d000 + 65421769 5 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 6 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 7 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 8 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 9 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 10 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 11 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 16:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d6bbef 0x120e3d000 + 66251759 4 QtWebEngineCore 0x0000000124ca11c9 0x120e3d000 + 65421769 5 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 6 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 7 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 8 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 9 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 10 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 11 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 17:: NetworkService 0 libsystem_kernel.dylib 0x00007fff7324bb86 kevent64 + 10 1 QtWebEngineCore 0x0000000124d9da2a 0x120e3d000 + 66456106 2 QtWebEngineCore 0x0000000124d9d927 0x120e3d000 + 66455847 3 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 4 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 5 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 6 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 7 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 8 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 9 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 18:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d6bbef 0x120e3d000 + 66251759 4 QtWebEngineCore 0x0000000124ca11c9 0x120e3d000 + 65421769 5 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 6 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 7 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 8 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 9 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 10 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 11 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 19:: ThreadPoolSingleThreadForegroundBlocking0 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d307bf 0x120e3d000 + 66009023 4 QtWebEngineCore 0x0000000124d3126c 0x120e3d000 + 66011756 5 QtWebEngineCore 0x0000000124d30ecd 0x120e3d000 + 66010829 6 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 7 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 20:: NetworkConfigWatcher 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d6bbef 0x120e3d000 + 66251759 4 QtWebEngineCore 0x0000000124ca11c9 0x120e3d000 + 65421769 5 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 6 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 7 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 8 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 9 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 10 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 11 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 21:: com.apple.NSEventThread 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 com.apple.CoreFoundation 0x00007fff3961a825 __CFRunLoopServiceMachPort + 247 3 com.apple.CoreFoundation 0x00007fff396192f2 __CFRunLoopRun + 1319 4 com.apple.CoreFoundation 0x00007fff3961876e CFRunLoopRunSpecific + 462 5 com.apple.AppKit 0x00007fff36a2eea4 _NSEventThread + 132 6 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 7 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 22:: MemoryInfra 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d6bbef 0x120e3d000 + 66251759 4 QtWebEngineCore 0x0000000124ca11c9 0x120e3d000 + 65421769 5 QtWebEngineCore 0x0000000124d1aa5c 0x120e3d000 + 65919580 6 QtWebEngineCore 0x0000000124cd2998 0x120e3d000 + 65624472 7 QtWebEngineCore 0x0000000124d3ceb8 0x120e3d000 + 66059960 8 QtWebEngineCore 0x0000000124d3d04a 0x120e3d000 + 66060362 9 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 10 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 11 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 23:: ThreadPoolSingleThreadSharedBackgroundBlocking1 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d307bf 0x120e3d000 + 66009023 4 QtWebEngineCore 0x0000000124d30f9a 0x120e3d000 + 66011034 5 QtWebEngineCore 0x0000000124d30e0d 0x120e3d000 + 66010637 6 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 7 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 24:: ThreadPoolForegroundWorker 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d307bf 0x120e3d000 + 66009023 4 QtWebEngineCore 0x0000000124d3126c 0x120e3d000 + 66011756 5 QtWebEngineCore 0x0000000124d30e6d 0x120e3d000 + 66010733 6 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 7 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 25:: ThreadPoolBackgroundWorker 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d307bf 0x120e3d000 + 66009023 4 QtWebEngineCore 0x0000000124d3126c 0x120e3d000 + 66011756 5 QtWebEngineCore 0x0000000124d30ddd 0x120e3d000 + 66010589 6 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 7 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 26:: ThreadPoolForegroundWorker 0 libsystem_kernel.dylib 0x00007fff73242dea mach_msg_trap + 10 1 libsystem_kernel.dylib 0x00007fff73243160 mach_msg + 60 2 QtWebEngineCore 0x0000000124d6be26 0x120e3d000 + 66252326 3 QtWebEngineCore 0x0000000124d307bf 0x120e3d000 + 66009023 4 QtWebEngineCore 0x0000000124d3126c 0x120e3d000 + 66011756 5 QtWebEngineCore 0x0000000124d30e6d 0x120e3d000 + 66010733 6 QtWebEngineCore 0x0000000124d64908 0x120e3d000 + 66222344 7 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 8 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 27: 0 libsystem_pthread.dylib 0x00007fff73301b68 start_wqthread + 0 Thread 28: 0 libsystem_pthread.dylib 0x00007fff73301b68 start_wqthread + 0 Thread 29: 0 libsystem_kernel.dylib 0x00007fff73245872 __psynch_cvwait + 10 1 libsystem_pthread.dylib 0x00007fff73306425 _pthread_cond_wait + 698 2 org.python.python 0x0000000105ee1214 PyThread_acquire_lock_timed + 340 3 org.python.python 0x0000000105f64d9e acquire_timed + 318 4 org.python.python 0x0000000105f64fdc lock_PyThread_acquire_lock + 44 5 org.python.python 0x0000000105d3ab07 method_vectorcall_VARARGS_KEYWORDS + 167 6 org.python.python 0x0000000105e572ef _PyEval_EvalFrameDefault + 60207 7 org.python.python 0x0000000105e5d4d0 _PyEval_Vector + 128 8 org.python.python 0x0000000105d2d816 method_vectorcall + 454 9 org.python.python 0x0000000105f65b26 thread_run + 230 10 org.python.python 0x0000000105ee0ea4 pythread_wrapper + 36 11 libsystem_pthread.dylib 0x00007fff73306109 _pthread_start + 148 12 libsystem_pthread.dylib 0x00007fff73301b8b thread_start + 15 Thread 0 crashed with X86 Thread State (64-bit): rax: 0x0000000000000000 rbx: 0x00000001138fedc0 rcx: 0x00007faa880679e8 rdx: 0x0000000000000000 rdi: 0x0000000000000307 rsi: 0x000000000000000b rbp: 0x00007faa88067a10 rsp: 0x00007faa880679e8 r8: 0x0000000000000002 r9: 0xcccccccccccccccd r10: 0x00000001138fedc0 r11: 0x0000000000000246 r12: 0x0000000000000307 r13: 0x0000000000000001 r14: 0x000000000000000b r15: 0x0000000000000016 rip: 0x00007fff7324932a rfl: 0x0000000000000246 cr2: 0x000000012df871e8 Logical CPU: 0 Error Code: 0x02000148 Trap Number: 133 Binary Images: 0x105c6d000 - 0x105c70ff7 +edu.ucsf.cgl.ChimeraX (1.7.1 - 1.7.1.0) 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0x7fff70d6bff7 libcups.2.dylib (483.9) /usr/lib/libcups.2.dylib 0x7fff70d6d000 - 0x7fff70dd2ff7 libcurl.4.dylib (118.120.6) /usr/lib/libcurl.4.dylib 0x7fff70e75000 - 0x7fff70e75fff libenergytrace.dylib (21) /usr/lib/libenergytrace.dylib 0x7fff70e76000 - 0x7fff70e90ff7 libexpat.1.dylib (19.60.3) /usr/lib/libexpat.1.dylib 0x7fff70e9e000 - 0x7fff70ea0fff libfakelink.dylib (149.1) /usr/lib/libfakelink.dylib 0x7fff70ea1000 - 0x7fff70ea6f57 libffi.dylib (26) /usr/lib/libffi.dylib 0x7fff70eaf000 - 0x7fff70eb4fff libgermantok.dylib (24) /usr/lib/libgermantok.dylib 0x7fff70eb5000 - 0x7fff70ebeff7 libheimdal-asn1.dylib (564.140.8) /usr/lib/libheimdal-asn1.dylib 0x7fff70ebf000 - 0x7fff70faffff libiconv.2.dylib (59) /usr/lib/libiconv.2.dylib 0x7fff70fb0000 - 0x7fff71207fff libicucore.A.dylib (64260.0.1) /usr/lib/libicucore.A.dylib 0x7fff71221000 - 0x7fff71222fff liblangid.dylib (133) /usr/lib/liblangid.dylib 0x7fff71223000 - 0x7fff7123bff3 liblzma.5.dylib (16) /usr/lib/liblzma.5.dylib 0x7fff71253000 - 0x7fff712faff7 libmecab.dylib (883.11) /usr/lib/libmecab.dylib 0x7fff712fb000 - 0x7fff7155dff1 libmecabra.dylib (883.11) /usr/lib/libmecabra.dylib 0x7fff718ca000 - 0x7fff718f9fff libncurses.5.4.dylib (57) /usr/lib/libncurses.5.4.dylib 0x7fff71a29000 - 0x7fff71ea5ff5 libnetwork.dylib (1880.120.4) /usr/lib/libnetwork.dylib 0x7fff71ea6000 - 0x7fff71ebdfff libnetworkextension.dylib (1095.140.2) /usr/lib/libnetworkextension.dylib 0x7fff71f46000 - 0x7fff71f79fde libobjc.A.dylib (787.1) /usr/lib/libobjc.A.dylib 0x7fff71f7a000 - 0x7fff71f7bff7 libodfde.dylib (26) /usr/lib/libodfde.dylib 0x7fff71f8c000 - 0x7fff71f90fff libpam.2.dylib (25.100.1) /usr/lib/libpam.2.dylib 0x7fff71f93000 - 0x7fff71fc9fff libpcap.A.dylib (89.120.2) /usr/lib/libpcap.A.dylib 0x7fff72009000 - 0x7fff72017ff9 libperfcheck.dylib (37.100.2) /usr/lib/libperfcheck.dylib 0x7fff72018000 - 0x7fff7201bff3 libpmenergy.dylib (214.120.2) /usr/lib/libpmenergy.dylib 0x7fff7201c000 - 0x7fff7201efff libpmsample.dylib (214.120.2) /usr/lib/libpmsample.dylib 0x7fff7204d000 - 0x7fff72065fff libresolv.9.dylib (67.40.1) /usr/lib/libresolv.9.dylib 0x7fff72067000 - 0x7fff720abff7 libsandbox.1.dylib (1217.141.8) /usr/lib/libsandbox.1.dylib 0x7fff720ac000 - 0x7fff720beff7 libsasl2.2.dylib (213.120.1) /usr/lib/libsasl2.2.dylib 0x7fff720bf000 - 0x7fff720c0ff7 libspindump.dylib (281.3) /usr/lib/libspindump.dylib 0x7fff720c1000 - 0x7fff722abff7 libsqlite3.dylib (308.6) /usr/lib/libsqlite3.dylib 0x7fff7239f000 - 0x7fff723ccffb libssl.46.dylib (47.140.2) /usr/lib/libssl.46.dylib 0x7fff7244e000 - 0x7fff7247fff7 libtidy.A.dylib (17.3) /usr/lib/libtidy.A.dylib 0x7fff724a1000 - 0x7fff724fbff8 libusrtcp.dylib (1880.120.4) /usr/lib/libusrtcp.dylib 0x7fff724fc000 - 0x7fff724ffffb libutil.dylib (57.140.1) /usr/lib/libutil.dylib 0x7fff72500000 - 0x7fff7250dfff libxar.1.dylib (425.7) /usr/lib/libxar.1.dylib 0x7fff72513000 - 0x7fff725f5fff libxml2.2.dylib (33.9) /usr/lib/libxml2.2.dylib 0x7fff725f9000 - 0x7fff72621fff libxslt.1.dylib (16.12) /usr/lib/libxslt.1.dylib 0x7fff72622000 - 0x7fff72634ff3 libz.1.dylib (76) /usr/lib/libz.1.dylib 0x7fff72ee3000 - 0x7fff72ee8ff3 libcache.dylib (83) /usr/lib/system/libcache.dylib 0x7fff72ee9000 - 0x7fff72ef4fff libcommonCrypto.dylib (60165.120.1) /usr/lib/system/libcommonCrypto.dylib 0x7fff72ef5000 - 0x7fff72efcfff libcompiler_rt.dylib (101.2) /usr/lib/system/libcompiler_rt.dylib 0x7fff72efd000 - 0x7fff72f06ff7 libcopyfile.dylib (166.40.1) /usr/lib/system/libcopyfile.dylib 0x7fff72f07000 - 0x7fff72f99fdb libcorecrypto.dylib (866.140.2) /usr/lib/system/libcorecrypto.dylib 0x7fff730a6000 - 0x7fff730e6ff0 libdispatch.dylib (1173.100.2) /usr/lib/system/libdispatch.dylib 0x7fff730e7000 - 0x7fff7311dfff libdyld.dylib (750.7) /usr/lib/system/libdyld.dylib 0x7fff7311e000 - 0x7fff7311effb libkeymgr.dylib (30) /usr/lib/system/libkeymgr.dylib 0x7fff7311f000 - 0x7fff7312bff3 libkxld.dylib (6153.141.59) /usr/lib/system/libkxld.dylib 0x7fff7312c000 - 0x7fff7312cff7 liblaunch.dylib (1738.140.3) /usr/lib/system/liblaunch.dylib 0x7fff7312d000 - 0x7fff73132ff7 libmacho.dylib (959.0.1) /usr/lib/system/libmacho.dylib 0x7fff73133000 - 0x7fff73135ff3 libquarantine.dylib (110.40.6) /usr/lib/system/libquarantine.dylib 0x7fff73136000 - 0x7fff73137ff7 libremovefile.dylib (48) /usr/lib/system/libremovefile.dylib 0x7fff73138000 - 0x7fff7314fff3 libsystem_asl.dylib (377.60.4) /usr/lib/system/libsystem_asl.dylib 0x7fff73150000 - 0x7fff73150ff7 libsystem_blocks.dylib (74) /usr/lib/system/libsystem_blocks.dylib 0x7fff73151000 - 0x7fff731d8fff libsystem_c.dylib (1353.100.4) /usr/lib/system/libsystem_c.dylib 0x7fff731d9000 - 0x7fff731dcffb libsystem_configuration.dylib (1061.141.2) /usr/lib/system/libsystem_configuration.dylib 0x7fff731dd000 - 0x7fff731e0fff libsystem_coreservices.dylib (114.1) /usr/lib/system/libsystem_coreservices.dylib 0x7fff731e1000 - 0x7fff731e9fff libsystem_darwin.dylib (1353.100.4) /usr/lib/system/libsystem_darwin.dylib 0x7fff731ea000 - 0x7fff731f1fff libsystem_dnssd.dylib (1096.100.3) /usr/lib/system/libsystem_dnssd.dylib 0x7fff731f2000 - 0x7fff731f3ffb libsystem_featureflags.dylib (17) /usr/lib/system/libsystem_featureflags.dylib 0x7fff731f4000 - 0x7fff73241ff7 libsystem_info.dylib (538) /usr/lib/system/libsystem_info.dylib 0x7fff73242000 - 0x7fff7326eff7 libsystem_kernel.dylib (6153.141.59) /usr/lib/system/libsystem_kernel.dylib 0x7fff7326f000 - 0x7fff732b6fff libsystem_m.dylib (3178) /usr/lib/system/libsystem_m.dylib 0x7fff732b7000 - 0x7fff732defff libsystem_malloc.dylib (283.100.6) /usr/lib/system/libsystem_malloc.dylib 0x7fff732df000 - 0x7fff732ecffb libsystem_networkextension.dylib (1095.140.2) /usr/lib/system/libsystem_networkextension.dylib 0x7fff732ed000 - 0x7fff732f6ff7 libsystem_notify.dylib (241.100.2) /usr/lib/system/libsystem_notify.dylib 0x7fff732f7000 - 0x7fff732fffef libsystem_platform.dylib (220.100.1) /usr/lib/system/libsystem_platform.dylib 0x7fff73300000 - 0x7fff7330afff libsystem_pthread.dylib (416.100.3) /usr/lib/system/libsystem_pthread.dylib 0x7fff7330b000 - 0x7fff7330fff3 libsystem_sandbox.dylib (1217.141.8) /usr/lib/system/libsystem_sandbox.dylib 0x7fff73310000 - 0x7fff73312fff libsystem_secinit.dylib (62.100.2) /usr/lib/system/libsystem_secinit.dylib 0x7fff73313000 - 0x7fff7331affb libsystem_symptoms.dylib (1238.120.2) /usr/lib/system/libsystem_symptoms.dylib 0x7fff7331b000 - 0x7fff73331ff2 libsystem_trace.dylib (1147.120.1) /usr/lib/system/libsystem_trace.dylib 0x7fff73333000 - 0x7fff73338ff7 libunwind.dylib (35.4) /usr/lib/system/libunwind.dylib 0x7fff73339000 - 0x7fff7336effe libxpc.dylib (1738.140.3) /usr/lib/system/libxpc.dylib External Modification Summary: Calls made by other processes targeting this process: task_for_pid: 19 thread_create: 0 thread_set_state: 0 Calls made by this process: task_for_pid: 0 thread_create: 0 thread_set_state: 0 Calls made by all processes on this machine: task_for_pid: 22459 thread_create: 0 thread_set_state: 0 VM Region Summary: ReadOnly portion of Libraries: Total=1.0G resident=0K(0%) swapped_out_or_unallocated=1.0G(100%) Writable regions: Total=5.3G written=0K(0%) resident=0K(0%) swapped_out=0K(0%) unallocated=5.3G(100%) VIRTUAL REGION REGION TYPE SIZE COUNT (non-coalesced) =========== ======= ======= Accelerate framework 768K 6 Activity Tracing 256K 1 CG backing stores 2816K 3 CG image 1360K 26 CoreAnimation 288K 24 CoreGraphics 8K 1 CoreImage 28K 3 CoreServices 172K 1 CoreUI image data 2968K 25 Foundation 24K 2 Kernel Alloc Once 8K 1 MALLOC 2.9G 659 MALLOC guard page 48K 9 MALLOC_MEDIUM (reserved) 1.4G 15 reserved VM address space (unallocated) MALLOC_NANO (reserved) 256.0M 1 reserved VM address space (unallocated) Mach message 16K 2 OpenGL GLSL 384K 4 STACK GUARD 116K 29 Stack 173.2M 30 Stack Guard 56.0M 1 VM_ALLOCATE 445.3M 517 VM_ALLOCATE (reserved) 160.0M 2 reserved VM address space (unallocated) __DATA 76.2M 613 __DATA_CONST 148K 7 __FONT_DATA 4K 1 __GLSLBUILTINS 5176K 1 __LINKEDIT 421.6M 267 __OBJC_RO 32.3M 1 __OBJC_RW 1908K 2 __TEXT 636.6M 586 __UNICODE 564K 1 mapped file 89.1M 49 shared memory 2860K 27 =========== ======= ======= TOTAL 6.6G 2917 TOTAL, minus reserved VM space 4.8G 2917 Log: Startup Messages --- warning | Replacing fetcher for 'pdb_nmr' and format NMRSTAR from NMRSTAR bundle with that from NMRSTAR bundle UCSF ChimeraX version: 1.7.1 (2024-01-23) © 2016-2023 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX OpenGL version: 4.1 ATI-3.10.23 OpenGL renderer: AMD Radeon Pro Vega 48 OpenGL Engine OpenGL vendor: ATI Technologies Inc. Python: 3.11.2 Locale: UTF-8 Qt version: PyQt6 6.3.1, Qt 6.3.1 Qt runtime version: 6.3.2 Qt platform: cocoa Hardware: Hardware Overview: Model Name: iMac Model Identifier: iMac19,1 Processor Name: 8-Core Intel Core i9 Processor Speed: 3.6 GHz Number of Processors: 1 Total Number of Cores: 8 L2 Cache (per Core): 256 KB L3 Cache: 16 MB Hyper-Threading Technology: Enabled Memory: 32 GB Boot ROM Version: 1731.100.125.0.0 SMC Version (system): 2.46f13 Software: System Software Overview: System Version: macOS 10.15.7 (19H1824) Kernel Version: Darwin 19.6.0 Time since boot: 21:11 Graphics/Displays: Radeon Pro Vega 48: Chipset Model: Radeon Pro Vega 48 Type: GPU Bus: PCIe PCIe Lane Width: x16 VRAM (Total): 8 GB Vendor: AMD (0x1002) Device ID: 0x6869 Revision ID: 0x0000 ROM Revision: 113-D0650E-072 VBIOS Version: 113-D05001A1XG-011 Option ROM Version: 113-D05001A1XG-011 EFI Driver Version: 01.01.072 Metal: Supported, feature set macOS GPUFamily2 v1 Displays: iMac: Display Type: Built-In Retina LCD Resolution: 5120 x 2880 Retina Framebuffer Depth: 30-Bit Color (ARGB2101010) Main Display: Yes Mirror: Off Online: Yes Automatically Adjust Brightness: No Connection Type: Internal Installed Packages: alabaster: 0.7.16 appdirs: 1.4.4 appnope: 0.1.3 asttokens: 2.4.1 Babel: 2.14.0 backcall: 0.2.0 beautifulsoup4: 4.11.2 blockdiag: 3.0.0 blosc2: 2.0.0 build: 0.10.0 certifi: 2022.12.7 cftime: 1.6.3 charset-normalizer: 3.3.2 ChimeraX-AddCharge: 1.5.13 ChimeraX-AddH: 2.2.5 ChimeraX-AlignmentAlgorithms: 2.0.1 ChimeraX-AlignmentHdrs: 3.4.1 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.12.2 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.1.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.49.1 ChimeraX-AtomicLibrary: 12.1.5 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.3.2 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.2 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.10.5 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2.2 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.3.2 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.3.2 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.3 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.5 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.7.1 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.2 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2 ChimeraX-DistMonitor: 1.4 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.2.2 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-Label: 1.1.8 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.1.6 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.1.4 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.2 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.6.1 ChimeraX-MedicalToolbar: 1.0.2 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.12.1 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.14 ChimeraX-ModelPanel: 1.4 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.1 ChimeraX-NRRD: 1.1 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.13.1 ChimeraX-PDB: 2.7.3 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.1 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.2 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.11 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.2 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.12.4 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.1.2 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.2.2 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.2 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.33.3 ChimeraX-uniprot: 2.3 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.3.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.3 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.1 contourpy: 1.2.0 cxservices: 1.2.2 cycler: 0.12.1 Cython: 0.29.33 debugpy: 1.8.0 decorator: 5.1.1 docutils: 0.19 executing: 2.0.1 filelock: 3.9.0 fonttools: 4.47.2 funcparserlib: 2.0.0a0 glfw: 2.6.4 grako: 3.16.5 h5py: 3.10.0 html2text: 2020.1.16 idna: 3.6 ihm: 0.38 imagecodecs: 2023.9.18 imagesize: 1.4.1 ipykernel: 6.23.2 ipython: 8.14.0 ipython-genutils: 0.2.0 ipywidgets: 8.1.1 jedi: 0.18.2 Jinja2: 3.1.2 jupyter-client: 8.2.0 jupyter-core: 5.7.1 jupyterlab-widgets: 3.0.9 kiwisolver: 1.4.5 line-profiler: 4.0.2 lxml: 4.9.2 lz4: 4.3.2 MarkupSafe: 2.1.4 matplotlib: 3.7.2 matplotlib-inline: 0.1.6 msgpack: 1.0.4 nest-asyncio: 1.6.0 netCDF4: 1.6.2 networkx: 3.1 nibabel: 5.0.1 nptyping: 2.5.0 numexpr: 2.8.8 numpy: 1.25.1 openvr: 1.23.701 packaging: 21.3 ParmEd: 3.4.3 parso: 0.8.3 pep517: 0.13.0 pexpect: 4.9.0 pickleshare: 0.7.5 pillow: 10.2.0 pip: 23.0 pkginfo: 1.9.6 platformdirs: 4.1.0 prompt-toolkit: 3.0.43 psutil: 5.9.5 ptyprocess: 0.7.0 pure-eval: 0.2.2 py-cpuinfo: 9.0.0 pycollada: 0.7.2 pydicom: 2.3.0 Pygments: 2.16.1 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.2801 pyparsing: 3.0.9 pyproject-hooks: 1.0.0 PyQt6-commercial: 6.3.1 PyQt6-Qt6: 6.3.2 PyQt6-sip: 13.4.0 PyQt6-WebEngine-commercial: 6.3.1 PyQt6-WebEngine-Qt6: 6.3.2 python-dateutil: 2.8.2 pytz: 2023.3.post1 pyzmq: 25.1.2 qtconsole: 5.4.3 QtPy: 2.4.1 RandomWords: 0.4.0 requests: 2.31.0 scipy: 1.11.1 setuptools: 67.4.0 setuptools-scm: 7.0.5 sfftk-rw: 0.7.3 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.5 sphinx: 6.1.3 sphinx-autodoc-typehints: 1.22 sphinxcontrib-applehelp: 1.0.8 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.6 sphinxcontrib-htmlhelp: 2.0.5 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.7 sphinxcontrib-serializinghtml: 1.1.10 stack-data: 0.6.3 superqt: 0.5.0 tables: 3.8.0 tcia-utils: 1.5.1 tifffile: 2023.7.18 tinyarray: 1.2.4 tomli: 2.0.1 tornado: 6.4 traitlets: 5.9.0 typing-extensions: 4.9.0 tzdata: 2023.4 urllib3: 2.1.0 wcwidth: 0.2.13 webcolors: 1.12 wheel: 0.38.4 wheel-filename: 1.4.1 widgetsnbextension: 4.0.9 }}} " defect feedback normal Window Toolkit Tom Goddard all ChimeraX