id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 15056 Crash configuring display chimerax-bug-report@… Tom Goddard "{{{ The following bug report has been submitted: Platform: macOS-14.4.1-x86_64-i386-64bit ChimeraX Version: 1.8.dev202404062101 (2024-04-06 21:01:47 UTC) Description Last time you used ChimeraX it crashed. Please describe steps that led to the crash here. 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1 \n__GLSLBUILTINS 5174K 1 \n__LINKEDIT 209.6M 144 \n__OBJC_RO 71.7M 1 \n__OBJC_RW 2196K 2 \n__TEXT 1.0G 751 \ndyld private memory 292K 3 \nmapped file 201.9M 63 \nshared memory 3516K 31 \n=========== ======= ======= \nTOTAL 5.2G 3040 \nTOTAL, minus reserved VM space 5.1G 3040 \n"", ""legacyInfo"" : { ""threadTriggered"" : { ""name"" : ""CrBrowserMain"", ""queue"" : ""com.apple.main-thread"" } }, ""logWritingSignature"" : ""0d55d7cc7e1201a304b3671cd1b34d5984140fec"", ""trialInfo"" : { ""rollouts"" : [ { ""rolloutId"" : ""5f72dc58705eff005a46b3a9"", ""factorPackIds"" : { }, ""deploymentId"" : 240000015 }, { ""rolloutId"" : ""60186475825c62000ccf5450"", ""factorPackIds"" : { }, ""deploymentId"" : 240000069 } ], ""experiments"" : [ ] } } ===== Log before crash start ===== UCSF ChimeraX version: 1.8.dev202404062101 (2024-04-06) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/multi/run_it008_half1_body001.mrc Opened run_it008_half1_body001.mrc as #1, grid size 420,420,420, pixel 1.06, shown at level 0.0118, step 2, values float32 > volume #1 step 1 > volume #1 level 0.01783 > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/multi/run_it008_half1_body002.mrc Opened run_it008_half1_body002.mrc as #2, grid size 420,420,420, pixel 1.06, shown at level 0.0144, step 2, values float32 > volume #2 level 0.01004 > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/multi/run_it008_half1_body003.mrc Opened run_it008_half1_body003.mrc as #3, grid size 420,420,420, pixel 1.06, shown at level 0.00475, step 2, values float32 > volume #3 level 0.01343 > volume #2 level 0.01501 > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/multi/run_it008_half1_body004.mrc Opened run_it008_half1_body004.mrc as #4, grid size 420,420,420, pixel 1.06, shown at level 0.00348, step 2, values float32 > volume #4 level 0.007599 > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/multi/run_it008_half1_body005.mrc Opened run_it008_half1_body005.mrc as #5, grid size 420,420,420, pixel 1.06, shown at level 0.00539, step 2, values float32 > volume #5 level 0.009476 > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/head.mrc Opened head.mrc as #6, grid size 420,420,420, pixel 1.06, shown at level 0.0146, step 2, values float32 > open > /Users/lijuanyin/project/prp43/wt_cu142/j772/job14/c6/job33_focus_unknown/c135/head.mrc Opened head.mrc as #7, grid size 420,420,420, pixel 1.06, shown at level 0.0146, step 2, values float32 ===== Log before crash end ===== Log: UCSF ChimeraX version: 1.8.dev202404062101 (2024-04-06) © 2016-2024 Regents of the University of California. All rights reserved. How to cite UCSF ChimeraX > open /Users/lijuanyin/Downloads/8gxs.cif 8gxs.cif title: PIC-Mediator in complex with +1 nucleosome (T40N) in H-binding state [more info...] Chain information for 8gxs.cif #1 --- Chain | Description | UniProt BA | Transcription initiation factor IIB | TF2B_HUMAN 1-316 DA | Transcription initiation factor TFIID subunit 1 | TAF1_HUMAN 1-1872 DB | Transcription initiation factor TFIID subunit 2 | TAF2_HUMAN 1-1199 DD Dd | Transcription initiation factor TFIID subunit 4 | TAF4_HUMAN 1-1085 DE De | Transcription initiation factor TFIID subunit 5 | TAF5_HUMAN 1-800 DF Df | Transcription initiation factor TFIID subunit 6 | TAF6_HUMAN 1-677 DG | Transcription initiation factor TFIID subunit 7 | TAF7_HUMAN 1-349 DH | Transcription initiation factor TFIID subunit 8 | TAF8_HUMAN 1-310 DI Di | Transcription initiation factor TFIID subunit 9 | TAF9_HUMAN 1-264 DJ Dj | Transcription initiation factor TFIID subunit 10 | TAF10_HUMAN 1-218 DL Dl | Transcription initiation factor TFIID subunit 12 | TAF12_HUMAN 1-161 DO | Transcription initiation factor IIA subunit 2 | T2AG_HUMAN 1-109 DP | TATA-box-binding protein | TBP_HUMAN 1-339 DQ | Transcription initiation factor IIA subunit 1 | TF2AA_HUMAN 1-376 Dc | Transcription initiation factor TFIID subunit 3 | TAF3_HUMAN 1-929 Dk | Transcription initiation factor TFIID subunit 11 | TAF11_HUMAN 1-211 Dm | Transcription initiation factor TFIID subunit 13 | TAF13_HUMAN 1-124 EA | General transcription factor IIE subunit 1 | T2EA_HUMAN 1-439 EB | Transcription initiation factor IIE subunit beta | T2EB_HUMAN 1-291 FA | General transcription factor IIF subunit 1 | T2FA_HUMAN 1-517 FB | General transcription factor IIF subunit 2 | T2FB_HUMAN 1-249 HA | General transcription and DNA repair factor IIH helicase subunit XPD | ERCC2_HUMAN 1-760 HB | General transcription factor IIH subunit 1 | TF2H1_HUMAN 1-548 HC | General transcription factor IIH subunit 4 | TF2H4_HUMAN 1-462 HD | CDK-activating kinase assembly factor MAT1 | MAT1_HUMAN 1-309 HE | General transcription factor IIH subunit 3 | TF2H3_HUMAN 1-308 HF | General transcription factor IIH subunit 5 | TF2H5_HUMAN 1-71 HG | General transcription factor IIH subunit 2 | TF2H2_HUMAN 1-395 HH | General transcription and DNA repair factor IIH helicase subunit XPB | ERCC3_HUMAN 1-782 HI | Cyclin-dependent kinase 7 | CDK7_HUMAN 1-346 HJ | Cyclin-H | CCNH_HUMAN 1-323 NA NE | Histone H3 | A0A310TTQ1_XENLA 400-535 600-735 NB NF | Histone H4 | H4_XENLA 0-102 200-302 NC NG | HISTONE H2A.Z | ND NH | Histone H2B | A0A8J0U496_XENLA 1197-1322 1397-1522 NX | DNA (162-mer) | NY | DNA (162-mer) | PA | DNA-directed RNA polymerase subunit | A0A8D1DPV6_PIG 1-1970 PB | DNA-directed RNA polymerase subunit beta | A0A4X1TVZ5_PIG 1-1174 PC | DNA-directed RNA polymerase II subunit RPB3 | I3LCH3_PIG 1-275 PD | DNA-directed RNA polymerase II subunit RPB4 | A0A481BYI6_PIG 1-142 PE | DNA-directed RNA polymerase II subunit E | A0A4X1VTX4_PIG 1-210 PF | DNA-directed RNA polymerase II subunit F | A0A4X1VEK9_PIG 1-127 PG | DNA-directed RNA polymerase II subunit RPB7 | A0A4X1VKG7_PIG 1-172 PH | DNA-directed RNA polymerases I, II, and III subunit RPABC3 | A0A4X1ULF2_PIG 1-150 PI | DNA-directed RNA polymerase II subunit RPB9 | RPB9_PIG 1-125 PJ | DNA-directed RNA polymerases I, II, and III subunit RPABC5 | A0A493TD97_ANAPP 1-67 PK | RNA_pol_L_2 domain-containing protein | A0A4X1UK25_PIG 1-117 PL | RPB12 | A0A4X1TRS6_PIG 1-58 X | DNA (228-mer) | Y | DNA (228-mer) | a | Mediator of RNA polymerase II transcription subunit 1 | MED1_HUMAN 1-1581 b | Mediator of RNA polymerase II transcription subunit 29 | MED29_HUMAN 1-200 c | Mediator of RNA polymerase II transcription subunit 27 | MED27_HUMAN 1-311 d | Mediator of RNA polymerase II transcription subunit 4 | MED4_HUMAN 1-270 e | Mediator of RNA polymerase II transcription subunit 28 | MED28_HUMAN 1-178 f | Mediator of RNA polymerase II transcription subunit 6 | MED6_HUMAN 1-246 g | Mediator of RNA polymerase II transcription subunit 7 | MED7_HUMAN 1-233 h | Isoform 2 of Mediator of RNA polymerase II transcription subunit 8 | MED8_HUMAN 1-268 i | Mediator of RNA polymerase II transcription subunit 9 | MED9_HUMAN 1-146 j | Mediator of RNA polymerase II transcription subunit 10 | MED10_HUMAN 1-135 k | Mediator of RNA polymerase II transcription subunit 11 | MED11_HUMAN 1-117 l | Mediator of RNA polymerase II transcription subunit 30 | MED30_HUMAN 1-178 m | Mediator of RNA polymerase II transcription subunit 31 | MED31_HUMAN 1-131 n | Mediator of RNA polymerase II transcription subunit 14 | MED14_HUMAN 1-1454 o | Mediator of RNA polymerase II transcription subunit 15 | MED15_HUMAN 1-788 p | Isoform 2 of Mediator of RNA polymerase II transcription subunit 16 | MED16_HUMAN 1-841 q | Mediator of RNA polymerase II transcription subunit 17 | MED17_HUMAN 1-651 r | Mediator of RNA polymerase II transcription subunit 18 | MED18_HUMAN 1-208 s | Mediator of RNA polymerase II transcription subunit 19 | MED19_HUMAN 1-244 t | Mediator of RNA polymerase II transcription subunit 20 | MED20_HUMAN 1-212 u | Mediator of RNA polymerase II transcription subunit 21 | MED21_HUMAN 1-144 v | Mediator of RNA polymerase II transcription subunit 22 | MED22_HUMAN 1-200 w | Mediator of RNA polymerase II transcription subunit 23 | MED23_HUMAN 1-1368 x | Mediator of RNA polymerase II transcription subunit 24 | MED24_HUMAN 1-989 y | Mediator of RNA polymerase II transcription subunit 25 | MED25_HUMAN 1-747 z | Mediator of RNA polymerase II transcription subunit 26 | MED26_HUMAN 1-600 Non-standard residues in 8gxs.cif #1 --- MG — magnesium ion SF4 — iron/sulfur cluster ZN — zinc ion OpenGL version: 4.1 ATI-5.5.17 OpenGL renderer: AMD Radeon Pro 5500M OpenGL Engine OpenGL vendor: ATI Technologies Inc. Python: 3.11.4 Locale: UTF-8 Qt version: PyQt6 6.6.1, Qt 6.6.1 Qt runtime version: 6.6.3 Qt platform: cocoa Hardware: Hardware Overview: Model Name: MacBook Pro Model Identifier: MacBookPro16,1 Processor Name: 8-Core Intel Core i9 Processor Speed: 2,3 GHz Number of Processors: 1 Total Number of Cores: 8 L2 Cache (per Core): 256 KB L3 Cache: 16 MB Hyper-Threading Technology: Enabled Memory: 64 GB System Firmware Version: 2022.100.22.0.0 (iBridge: 21.16.4222.0.0,0) OS Loader Version: 580~1678 Software: System Software Overview: System Version: macOS 14.4.1 (23E224) Kernel Version: Darwin 23.4.0 Time since boot: 1天9小时24分钟 Graphics/Displays: Intel UHD Graphics 630: Chipset Model: Intel UHD Graphics 630 Type: GPU Bus: Built-In VRAM (Dynamic, Max): 1536 MB Vendor: Intel Device ID: 0x3e9b Revision ID: 0x0002 Automatic Graphics Switching: Supported gMux Version: 5.0.0 Metal Support: Metal 3 AMD Radeon Pro 5500M: Chipset Model: AMD Radeon Pro 5500M Type: GPU Bus: PCIe PCIe Lane Width: x16 VRAM (Total): 8 GB Vendor: AMD (0x1002) Device ID: 0x7340 Revision ID: 0x0040 ROM Revision: 113-D3220E-190 VBIOS Version: 113-D32206U1-020 Option ROM Version: 113-D32206U1-020 EFI Driver Version: 01.A1.190 Automatic Graphics Switching: Supported gMux Version: 5.0.0 Metal Support: Metal 3 Displays: C34H89x: Resolution: 3440 x 1440 (UWQHD - Ultra-Wide Quad HD) UI Looks like: 3440 x 1440 @ 50.00Hz Framebuffer Depth: 30-Bit Color (ARGB2101010) Display Serial Number: H1AK500000 Main Display: Yes Mirror: Off Online: Yes Rotation: Supported Adapter Type: Apple USB-C Digital AV Adapter Adapter Firmware Version: 2,35 Installed Packages: alabaster: 0.7.16 appdirs: 1.4.4 appnope: 0.1.4 asttokens: 2.4.1 Babel: 2.14.0 beautifulsoup4: 4.12.3 blockdiag: 3.0.0 blosc2: 2.0.0 build: 1.1.1 certifi: 2023.11.17 cftime: 1.6.3 charset-normalizer: 3.3.2 ChimeraX-AddCharge: 1.5.16 ChimeraX-AddH: 2.2.5 ChimeraX-AlignmentAlgorithms: 2.0.2 ChimeraX-AlignmentHdrs: 3.4.3 ChimeraX-AlignmentMatrices: 2.1 ChimeraX-Alignments: 2.12.5 ChimeraX-AlphaFold: 1.0 ChimeraX-AltlocExplorer: 1.1.1 ChimeraX-AmberInfo: 1.0 ChimeraX-Arrays: 1.1 ChimeraX-Atomic: 1.56.1 ChimeraX-AtomicLibrary: 14.0.3 ChimeraX-AtomSearch: 2.0.1 ChimeraX-AxesPlanes: 2.4 ChimeraX-BasicActions: 1.1.2 ChimeraX-BILD: 1.0 ChimeraX-BlastProtein: 2.1.2 ChimeraX-BondRot: 2.0.4 ChimeraX-BugReporter: 1.0.1 ChimeraX-BuildStructure: 2.12.1 ChimeraX-Bumps: 1.0 ChimeraX-BundleBuilder: 1.2.2 ChimeraX-ButtonPanel: 1.0.1 ChimeraX-CageBuilder: 1.0.1 ChimeraX-CellPack: 1.0 ChimeraX-Centroids: 1.4 ChimeraX-ChangeChains: 1.1 ChimeraX-CheckWaters: 1.4 ChimeraX-ChemGroup: 2.0.1 ChimeraX-Clashes: 2.2.4 ChimeraX-ColorActions: 1.0.3 ChimeraX-ColorGlobe: 1.0 ChimeraX-ColorKey: 1.5.5 ChimeraX-CommandLine: 1.2.5 ChimeraX-ConnectStructure: 2.0.1 ChimeraX-Contacts: 1.0.1 ChimeraX-Core: 1.8.dev202404062101 ChimeraX-CoreFormats: 1.2 ChimeraX-coulombic: 1.4.3 ChimeraX-Crosslinks: 1.0 ChimeraX-Crystal: 1.0 ChimeraX-CrystalContacts: 1.0.1 ChimeraX-DataFormats: 1.2.3 ChimeraX-Dicom: 1.2 ChimeraX-DistMonitor: 1.4.2 ChimeraX-DockPrep: 1.1.3 ChimeraX-Dssp: 2.0 ChimeraX-EMDB-SFF: 1.0 ChimeraX-ESMFold: 1.0 ChimeraX-FileHistory: 1.0.1 ChimeraX-FunctionKey: 1.0.1 ChimeraX-Geometry: 1.3 ChimeraX-gltf: 1.0 ChimeraX-Graphics: 1.1.1 ChimeraX-Hbonds: 2.4 ChimeraX-Help: 1.2.2 ChimeraX-HKCage: 1.3 ChimeraX-IHM: 1.1 ChimeraX-ImageFormats: 1.2 ChimeraX-IMOD: 1.0 ChimeraX-IO: 1.0.1 ChimeraX-ItemsInspection: 1.0.1 ChimeraX-IUPAC: 1.0 ChimeraX-Label: 1.1.9 ChimeraX-ListInfo: 1.2.2 ChimeraX-Log: 1.1.6 ChimeraX-LookingGlass: 1.1 ChimeraX-Maestro: 1.9.1 ChimeraX-Map: 1.2 ChimeraX-MapData: 2.0 ChimeraX-MapEraser: 1.0.1 ChimeraX-MapFilter: 2.0.1 ChimeraX-MapFit: 2.0 ChimeraX-MapSeries: 2.1.1 ChimeraX-Markers: 1.0.1 ChimeraX-Mask: 1.0.2 ChimeraX-MatchMaker: 2.1.3 ChimeraX-MCopy: 1.0 ChimeraX-MDcrds: 2.7 ChimeraX-MedicalToolbar: 1.0.2 ChimeraX-Meeting: 1.0.1 ChimeraX-MLP: 1.1.1 ChimeraX-mmCIF: 2.14.1 ChimeraX-MMTF: 2.2 ChimeraX-Modeller: 1.5.15 ChimeraX-ModelPanel: 1.5 ChimeraX-ModelSeries: 1.0.1 ChimeraX-Mol2: 2.0.3 ChimeraX-Mole: 1.0 ChimeraX-Morph: 1.0.2 ChimeraX-MouseModes: 1.2 ChimeraX-Movie: 1.0 ChimeraX-Neuron: 1.0 ChimeraX-Nifti: 1.1 ChimeraX-NMRSTAR: 1.0.2 ChimeraX-NRRD: 1.1 ChimeraX-Nucleotides: 2.0.3 ChimeraX-OpenCommand: 1.13.4 ChimeraX-PDB: 2.7.5 ChimeraX-PDBBio: 1.0.1 ChimeraX-PDBLibrary: 1.0.4 ChimeraX-PDBMatrices: 1.0 ChimeraX-PickBlobs: 1.0.1 ChimeraX-Positions: 1.0 ChimeraX-PresetMgr: 1.1.1 ChimeraX-PubChem: 2.1 ChimeraX-ReadPbonds: 1.0.1 ChimeraX-Registration: 1.1.2 ChimeraX-RemoteControl: 1.0 ChimeraX-RenderByAttr: 1.3 ChimeraX-RenumberResidues: 1.1 ChimeraX-ResidueFit: 1.0.1 ChimeraX-RestServer: 1.2 ChimeraX-RNALayout: 1.0 ChimeraX-RotamerLibMgr: 4.0 ChimeraX-RotamerLibsDunbrack: 2.0 ChimeraX-RotamerLibsDynameomics: 2.0 ChimeraX-RotamerLibsRichardson: 2.0 ChimeraX-SaveCommand: 1.5.1 ChimeraX-SchemeMgr: 1.0 ChimeraX-SDF: 2.0.2 ChimeraX-Segger: 1.0 ChimeraX-Segment: 1.0.1 ChimeraX-Segmentations: 1.0 ChimeraX-SelInspector: 1.0 ChimeraX-SeqView: 2.11.2 ChimeraX-Shape: 1.0.1 ChimeraX-Shell: 1.0.1 ChimeraX-Shortcuts: 1.1.1 ChimeraX-ShowSequences: 1.0.3 ChimeraX-SideView: 1.0.1 ChimeraX-Smiles: 2.1.2 ChimeraX-SmoothLines: 1.0 ChimeraX-SpaceNavigator: 1.0 ChimeraX-StdCommands: 1.16.3 ChimeraX-STL: 1.0.1 ChimeraX-Storm: 1.0 ChimeraX-StructMeasure: 1.2 ChimeraX-Struts: 1.0.1 ChimeraX-Surface: 1.0.1 ChimeraX-SwapAA: 2.0.1 ChimeraX-SwapRes: 2.5 ChimeraX-TapeMeasure: 1.0 ChimeraX-TaskManager: 1.0 ChimeraX-Test: 1.0 ChimeraX-Toolbar: 1.1.2 ChimeraX-ToolshedUtils: 1.2.4 ChimeraX-Topography: 1.0 ChimeraX-ToQuest: 1.0 ChimeraX-Tug: 1.0.1 ChimeraX-UI: 1.37.1 ChimeraX-uniprot: 2.3 ChimeraX-UnitCell: 1.0.1 ChimeraX-ViewDockX: 1.3.2 ChimeraX-VIPERdb: 1.0 ChimeraX-Vive: 1.1 ChimeraX-VolumeMenu: 1.0.1 ChimeraX-vrml: 1.0 ChimeraX-VTK: 1.0 ChimeraX-WavefrontOBJ: 1.0 ChimeraX-WebCam: 1.0.2 ChimeraX-WebServices: 1.1.3 ChimeraX-Zone: 1.0.1 colorama: 0.4.6 comm: 0.2.2 contourpy: 1.2.1 cxservices: 1.2.2 cycler: 0.12.1 Cython: 3.0.9 debugpy: 1.8.1 decorator: 5.1.1 docutils: 0.20.1 executing: 2.0.1 filelock: 3.13.1 fonttools: 4.51.0 funcparserlib: 2.0.0a0 glfw: 2.7.0 grako: 3.16.5 h5py: 3.10.0 html2text: 2024.2.26 idna: 3.6 ihm: 0.43 imagecodecs: 2024.1.1 imagesize: 1.4.1 ipykernel: 6.29.2 ipython: 8.21.0 ipywidgets: 8.1.2 jedi: 0.19.1 Jinja2: 3.1.3 jupyter-client: 8.6.0 jupyter-core: 5.7.2 jupyterlab-widgets: 3.0.10 kiwisolver: 1.4.5 line-profiler: 4.1.2 lxml: 5.1.0 lz4: 4.3.3 MarkupSafe: 2.1.5 matplotlib: 3.8.3 matplotlib-inline: 0.1.6 msgpack: 1.0.8 ndindex: 1.8 nest-asyncio: 1.6.0 netCDF4: 1.6.5 networkx: 3.2.1 nibabel: 5.0.1 nptyping: 2.5.0 numexpr: 2.10.0 numpy: 1.26.4 openvr: 1.26.701 packaging: 23.2 ParmEd: 4.2.2 parso: 0.8.4 pep517: 0.13.1 pexpect: 4.9.0 pillow: 10.3.0 pip: 24.0 pkginfo: 1.10.0 platformdirs: 4.2.0 prompt-toolkit: 3.0.43 psutil: 5.9.8 ptyprocess: 0.7.0 pure-eval: 0.2.2 py-cpuinfo: 9.0.0 pycollada: 0.8 pydicom: 2.3.0 pygments: 2.17.2 pynmrstar: 3.3.4 pynrrd: 1.0.0 PyOpenGL: 3.1.7 PyOpenGL-accelerate: 3.1.7 pyopenxr: 1.0.3302 pyparsing: 3.1.2 pyproject-hooks: 1.0.0 PyQt6-commercial: 6.6.1 PyQt6-Qt6: 6.6.3 PyQt6-sip: 13.6.0 PyQt6-WebEngine-commercial: 6.6.0 PyQt6-WebEngine-Qt6: 6.6.3 python-dateutil: 2.9.0.post0 pytz: 2024.1 pyzmq: 25.1.2 qtconsole: 5.5.1 QtPy: 2.4.1 RandomWords: 0.4.0 requests: 2.31.0 scipy: 1.12.0 setuptools: 69.2.0 setuptools-scm: 8.0.4 sfftk-rw: 0.8.1 six: 1.16.0 snowballstemmer: 2.2.0 sortedcontainers: 2.4.0 soupsieve: 2.5 sphinx: 7.2.6 sphinx-autodoc-typehints: 2.0.0 sphinxcontrib-applehelp: 1.0.8 sphinxcontrib-blockdiag: 3.0.0 sphinxcontrib-devhelp: 1.0.6 sphinxcontrib-htmlhelp: 2.0.5 sphinxcontrib-jsmath: 1.0.1 sphinxcontrib-qthelp: 1.0.7 sphinxcontrib-serializinghtml: 1.1.10 stack-data: 0.6.3 superqt: 0.6.1 tables: 3.8.0 tcia-utils: 1.5.1 tifffile: 2024.1.30 tinyarray: 1.2.4 tornado: 6.4 traitlets: 5.14.1 typing-extensions: 4.11.0 tzdata: 2024.1 urllib3: 2.2.1 wcwidth: 0.2.13 webcolors: 1.13 wheel: 0.43.0 wheel-filename: 1.4.1 widgetsnbextension: 4.0.10 }}} " defect closed normal Platform can't reproduce all ChimeraX