id summary reporter owner description type status priority milestone component version resolution keywords cc blockedby blocking notify_on_close platform project 10457 tgz chimeraX download does not install on fedora core 37 bennion1@… Greg Couch "{{{ hello, Unpacking the tgz file and running chimeraX from bin/ produces these results, mostly looking for libffi.so however, I have all libffi libraries installed that exist for my repo RPMs 33 kB/s | 2.0 kB 00:00 Package libffi-3.4.4-1.fc37.x86_64 is already installed. Package libffi-devel-3.4.4-1.fc37.x86_64 is already installed. [bennion1@emer bin]$ ls amber20 fonttools kernprof nib-tck2trk pybabel rst2html.py sphinx-build blockdiag grako lsm2bin nib-trk2tck __pycache__ rst2latex.py sphinx-quickstart ChimeraX html2text nc3tonc4 normalizer pydicom rst2man.py structcomp cpuinfo imagecodecs nc4tonc3 parmed pyftmerge rst2odt_prepstyles.py tiff2fsspec cygdb ipython ncinfo parrec2nii pyftsubset rst2odt.py tiffcomment cython ipython3 nib-conform pip pygmentize rst2pseudoxml.py tifffile cythonize jupyter nib-convert pip3 pylupdate6 rst2s5.py ttx distro jupyter-kernel nib-dicomfs pip3.11 pyproject-build rst2xetex.py wheel docutils jupyter-kernelspec nib-diff pkginfo python3.11 rst2xml.py wheel-filename f2py jupyter-migrate nib-ls pt2to3 pyuic6 rstpep2html.py xparmed f2py3 jupyter-qtconsole nib-nifti-dx ptdump qtpy sff f2py3.11 jupyter-run nib-roi ptrepack rst2html4.py sphinx-apidoc ffmpeg jupyter-troubleshoot nib-stats pttree rst2html5.py sphinx-autogen [bennion1@emer bin]$ ./ChimeraX NOTE: available bundle cache has not been initialized yet WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/seqalign/__init__.py"", line 25, in from .cmd import (get_alignment_sequence, SeqArg, AlignmentArg, AlignSeqPairArg, SeqRegionArg, File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/seqalign/cmd.py"", line 318, in from chimerax.atomic.seq_support import IdentityDenominator, percent_identity File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 386, in init_manager api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-Alignments's module: libffi.so.6: cannot open shared object file: No such file or directory WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/build_structure/__init__.py"", line 14, in from .mod import modify_atom, cn_peptide_bond File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/build_structure/mod.py"", line 14, in from chimerax.atomic import Element File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 375, in initialize api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-BuildStructure's module: libffi.so.6: cannot open shared object file: No such file or directory WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/markers/__init__.py"", line 78, in from .markers import MarkerSet, create_link, selected_markers, selected_links File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/markers/markers.py"", line 25, in from chimerax.atomic import Structure File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 375, in initialize api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-Markers's module: libffi.so.6: cannot open shared object file: No such file or directory WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/chem_group/__init__.py"", line 25, in from .chem_group import find_group File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/chem_group/chem_group.py"", line 29, in from chimerax.atomic.idatm import type_info, tetrahedral, planar, linear, single File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 375, in initialize api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-ChemGroup's module: libffi.so.6: cannot open shared object file: No such file or directory WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dist_monitor/__init__.py"", line 26, in from .cmd import SimpleMeasurable, ComplexMeasurable File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dist_monitor/cmd.py"", line 38, in from chimerax.atomic import Atom File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 375, in initialize api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-DistMonitor's module: libffi.so.6: cannot open shared object file: No such file or directory WARNING: QCoreApplication::postEvent: Unexpected null receiver NOTE: Unable to import OpenGL.platform.glx.GLXPlatform: libffi.so.6: cannot open shared object file: No such file or directory Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 376, in initialize api._api_caller.initialize(api, session, self) File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/__init__.py"", line 1294, in initialize return cls._get_func(api, ""initialize"")(session, bi) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dicom/__init__.py"", line 31, in initialize from .ui.segmentation_mouse_mode import ( File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dicom/ui/segmentation_mouse_mode.py"", line 20, in from .segmentations import SegmentationTool File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dicom/ui/segmentations.py"", line 55, in from ..ui.orthoplanes import Axis File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dicom/ui/orthoplanes.py"", line 51, in from ..graphics import ( File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dicom/graphics/__init__.py"", line 1, in from .view import OrthoplaneView File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/dicom/graphics/view.py"", line 6, in from chimerax.graphics import gllist File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/graphics/gllist.py"", line 71, in wrap_opengl_routines(globals()) File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/graphics/gllist.py"", line 22, in wrap_opengl_routines from OpenGL import GL File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/OpenGL/GL/__init__.py"", line 3, in from OpenGL import error as _error File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/OpenGL/error.py"", line 12, in from OpenGL import platform, _configflags File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/OpenGL/platform/__init__.py"", line 56, in _load() File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/OpenGL/platform/__init__.py"", line 50, in _load plugin = plugin_class() ^^^^^^^^^^^^^^ TypeError: 'NoneType' object is not callable WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/swap_res/__init__.py"", line 25, in from .swap_res import swap_aa, get_rotamers File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/swap_res/swap_res.py"", line 28, in from chimerax.atomic import AtomicStructure File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 375, in initialize api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-SwapRes's module: libffi.so.6: cannot open shared object file: No such file or directory WARNING: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 501, in get_module m = importlib.import_module(self.package_name) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/importlib/__init__.py"", line 126, in import_module return _bootstrap._gcd_import(name[level:], package, level) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File """", line 1206, in _gcd_import File """", line 1178, in _find_and_load File """", line 1149, in _find_and_load_unlocked File """", line 690, in _load_unlocked File """", line 940, in exec_module File """", line 241, in _call_with_frames_removed File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/__init__.py"", line 33, in from .molobject import Atom, Bond, Chain, CoordSet, Element, Pseudobond, Residue, Sequence, \ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molobject.py"", line 28, in from .molc import CFunctions, string, cptr, pyobject, set_c_pointer, pointer, size_t File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/atomic/molc.py"", line 30, in import ctypes File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/ctypes/__init__.py"", line 8, in from _ctypes import Union, Structure, Array ImportError: libffi.so.6: cannot open shared object file: No such file or directory During handling of the above exception, another exception occurred: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 375, in initialize api = self._get_api(session.logger) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 520, in _get_api m = self.get_module() ^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/core/toolshed/info.py"", line 503, in get_module raise ToolshedError(""Error importing bundle %s's module: %s"" % (self.name, str(e))) chimerax.core.toolshed.ToolshedError: Error importing bundle ChimeraX-Atomic's module: libffi.so.6: cannot open shared object file: No such file or directory ERROR: Bundle 'ChimeraX-Alignments' custom initialization failed ERROR: Bundle 'ChimeraX-BuildStructure' custom initialization failed ERROR: Bundle 'ChimeraX-Markers' custom initialization failed ERROR: Bundle 'ChimeraX-ChemGroup' custom initialization failed ERROR: Bundle 'ChimeraX-DistMonitor' custom initialization failed ERROR: Bundle 'ChimeraX-Dicom' custom initialization failed ERROR: Bundle 'ChimeraX-SwapRes' custom initialization failed ERROR: Bundle 'ChimeraX-Atomic' custom initialization failed NOTE: Unable to import OpenGL.platform.glx.GLXPlatform: libffi.so.6: cannot open shared object file: No such file or directory Traceback (most recent call last): File """", line 198, in _run_module_as_main File """", line 88, in _run_code File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/core/__main__.py"", line 1069, in exit_code = init(sys.argv) ^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/core/__main__.py"", line 722, in init sess.ui.build() File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/ui/gui.py"", line 191, in build self.main_window = mw = MainWindow(self, self.session) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/ui/gui.py"", line 445, in __init__ self.graphics_window = g = GraphicsWindow(self._stack, ui, stereo) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/ui/graphics.py"", line 36, in __init__ oc = OpenGLContext(self, ui.primaryScreen(), use_stereo = stereo) ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/graphics/opengl.py"", line 60, in __init__ _initialize_pyopengl() # Set global GL module. ^^^^^^^^^^^^^^^^^^^^^^ File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/chimerax/graphics/opengl.py"", line 375, in _initialize_pyopengl import OpenGL.GL File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/OpenGL/GL/__init__.py"", line 3, in from OpenGL import error as _error File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/OpenGL/error.py"", line 12, in from OpenGL import platform, _configflags File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/OpenGL/platform/__init__.py"", line 56, in _load() File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/OpenGL/platform/__init__.py"", line 50, in _load plugin = plugin_class() ^^^^^^^^^^^^^^ TypeError: 'NoneType' object is not callable BUG: TypeError: 'NoneType' object is not callable File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site- packages/OpenGL/platform/__init__.py"", line 50, in _load plugin = plugin_class() ^^^^^^^^^^^^^^ _See log for complete Python traceback._ NOTE: Exception ignored in: Traceback (most recent call last): File ""/home/bennion1/Downloads/chimerax-1.7/lib/python3.11/site-packages/chimerax/graphics/opengl.py"", line 85, in __del__ if not self._deleted: ^^^^^^^^^^^^^ AttributeError: 'OpenGLContext' object has no attribute '_deleted' [cid:53a9550c-38ae-4239-9fd1-3365588775ff][cid:54192077-477e-4f79-af47-9ac7ba06d252][cid:2d1f31c5-8fe5-4b09-94f9-7ae2edbded1b]Biosciences and Biotechnology Division|PLS|Lawrence Livermore National Laboratory|925-422-5722 Friendly Email Disclaimer: I'm writing or responding to this email at a time that is convenient for my work schedule. Please do the same, and don't feel obligated to respond outside of your standard work hours. }}} [[Image(Outlook-bdyggrlc.png)]] [[Image(Outlook-4xvwsxqx.png)]] [[Image(Outlook-umwse51f.png)]] " defect closed normal Platform limitation Tom Goddard all ChimeraX