init start init preamble 5.316734313964844e-05 setup SSL certificates 0.1013479232788086 parse args 0.3666691780090332 init ssl cert dir 0.7039508819580078 app dirs 0.7059531211853027 init ses 0.7363770008087158 init settings 0.7516109943389893 reg commands 0.7702140808105469 init Qt 0.8816111087799072 UI settings: 0.0016591548919677734 UI import web engine: 0.7772352695465088 UI init QApplication: 1.1712372303009033 UI high DPI: 1.1713011264801025 UI redirect Qt messages: 1.171342134475708 UI finished: 1.1714181900024414 init UI 2.0531179904937744 splash setup 2.527726888656616 toolshed.restart_action_info() 2.5278139114379883 toolshed handle restart file 2.528228998184204 toolshed URL 2.5282530784606934 toolshed constructor: preamble: 0.0004801750183105469 toolshed constructor: init from cache: 0.19756126403808594 toolshed constructor: reload: 0.2494049072265625 toolshed constructor: async cache update (finished): 0.2687721252441406 toolshed init 2.797071933746338 toolshed get toolshed 2.7971160411834717 bootstrap: preamble: 0.0035829544067382812 init managers: preamble: 2.1457672119140625e-06 init managers: init Arrays: 2.002716064453125e-05 init managers: init Core: 3.0040740966796875e-05 init managers: init ToolshedUtils: 3.790855407714844e-05 init managers: init RotamerLibMgr: 0.009739160537719727 init managers: init WebServices: 0.009778022766113281 init managers: init Movie: 0.00978708267211914 resumed SEQCROW queue init managers: init SEQCROW: 2.4178309440612793 init managers: init AmberInfo: 2.4178500175476074 init managers: init SmoothLines: 2.4178590774536133 init managers: init ExperimentalCommands: 2.4178760051727295 init managers: init ListInfo: 2.4178829193115234 init managers: init Segment: 2.4178900718688965 init managers: init PresetMgr: 2.44632887840271 init managers: init RestServer: 2.446357011795044 init managers: init IO: 2.4463651180267334 init managers: init Test: 2.4463729858398438 init managers: init SchemeMgr: 2.473517894744873 init managers: init AtomicLibrary: 2.473544120788574 init managers: init RemoteControl: 2.473552942276001 init managers: init Geometry: 2.473560094833374 init managers: init DataFormats: 2.4920992851257324 init managers: init Crystal: 2.4921529293060303 init managers: init Dssp: 2.4921679496765137 init managers: init AtomSearchLibrary: 2.4921770095825195 init managers: init RotamerLibsRichardson: 2.49218487739563 init managers: init Struts: 2.4921932220458984 init managers: init Shape: 2.492201089859009 init managers: init RotamerLibsDynameomics: 2.492211103439331 init managers: init SpaceNavigator: 2.492218017578125 init managers: init Graphics: 2.492225170135498 init managers: init IMOD: 2.4922330379486084 init managers: init RotamerLibsDunbrack: 2.492238998413086 init managers: init WebCam: 2.492246150970459 init managers: init MapData: 2.492253065109253 init managers: init MouseModes: 2.4922590255737305 init managers: init AtomSearch: 2.492269992828369 init managers: init LookingGlass: 2.492276191711426 init managers: init Vive: 2.492281913757324 init managers: init ConnectStructure: 2.492288112640381 init managers: init UI: 2.4922940731048584 init managers: init EMDB-SFF: 2.492300033569336 init managers: init MLP: 2.4923059940338135 init managers: init Meeting: 2.4923269748687744 init managers: init DistUI: 2.4923348426818848 init managers: init MedicalToolbar: 2.492342233657837 init managers: init Tug: 2.4923479557037354 init managers: init BugReporter: 2.492354154586792 init managers: init SaveCommand: 2.8750998973846436 init managers: init PickBlobs: 2.8751449584960938 init managers: init BasicActions: 2.8751540184020996 init managers: init ResidueFit: 2.8751609325408936 init managers: init FunctionKey: 2.87516713142395 init managers: init Contacts: 2.8751728534698486 init managers: init CommandLine: 2.8751790523529053 init managers: init Log: 2.875185012817383 init managers: init MapEraser: 2.875192165374756 init managers: init Registration: 2.8751981258392334 init managers: init FileHistory: 2.875203847885132 init managers: init VolumeMenu: 2.8752100467681885 init managers: init SideView: 2.875216007232666 init managers: init OpenCommand: 2.8784031867980957 init managers: init ButtonPanel: 2.878420114517212 init managers: init ModelSeries: 2.8784279823303223 init managers: init Shell: 2.878434896469116 init managers: init Label: 2.8784420490264893 init managers: init BondRot: 2.878448009490967 init managers: init Positions: 2.878453016281128 init managers: init Help: 2.8784589767456055 init managers: init Neuron: 2.878465175628662 init managers: init ImageFormats: 2.8784711360931396 init managers: init ColorGlobe: 2.878477096557617 init managers: init gltf: 2.8784821033477783 init managers: init STL: 2.878488063812256 init managers: init VTK: 2.8784940242767334 init managers: init CellPack: 2.878499984741211 init managers: init Dicom: 2.878504991531372 init managers: init Storm: 2.8785109519958496 init managers: init Crosslinks: 2.8785159587860107 init managers: init ColorKey: 2.8785219192504883 init managers: init SDF: 2.878528118133545 init managers: init CoreFormats: 2.878532886505127 init managers: init WavefrontOBJ: 2.8785390853881836 init managers: init ColorActions: 2.878545045852661 init managers: init Centroids: 2.8785500526428223 init managers: init Mol2: 2.8785560131073 init managers: init Zone: 2.878561019897461 init managers: init mmCIF: 2.8785669803619385 init managers: init StdCommands: 2.878573179244995 init managers: init RNALayout: 2.8785791397094727 init managers: init AlignmentAlgorithms: 2.878584146499634 init managers: init ModelPanel: 2.8785901069641113 init managers: init PubChem: 2.8785958290100098 init managers: init Clashes: 2.87860107421875 init managers: init Smiles: 2.8786070346832275 init managers: init uniprot: 2.878612995147705 init managers: init PDBLibrary: 2.8786189556121826 init managers: init Map: 2.878624200820923 init managers: init Shortcuts: 2.8786299228668213 init managers: init SeqView: 2.878636121749878 init managers: init Markers: 2.87864089012146 init managers: init MapFilter: 2.8786470890045166 init managers: init AddCharge: 2.8786520957946777 init managers: init SwapRes: 2.8786580562591553 init managers: init ViewDockX: 2.878664016723633 init managers: init PDB: 2.878669261932373 init managers: init Clipper: 2.8786749839782715 init managers: init SwapAA: 2.8786802291870117 init managers: init Surface: 2.87868595123291 init managers: init AxesPlanes: 2.8786919116973877 init managers: init MatchMaker: 2.878697156906128 init managers: init Morph: 2.8787028789520264 init managers: init Atomic: 2.8787150382995605 init managers: init Mask: 2.87872314453125 init managers: init Alignments: 2.8833000659942627 init managers: init ShowSequences: 2.8833210468292236 init managers: init MapFit: 2.883329153060913 init managers: init coulombic: 2.883336067199707 init managers: init Bumps: 2.8833420276641846 init managers: init BlastProtein: 2.883347988128662 init managers: init MapSeries: 2.8833529949188232 init managers: init Modeller: 2.88335919380188 init managers: init Segger: 2.8833649158477783 init managers: init BILD: 2.883371114730835 init managers: init Maestro: 2.883375883102417 init managers: init TapeMeasure: 2.8833820819854736 init managers: init StrudelScore: 2.883388042449951 init managers: init MDcrds: 2.883394241333008 init managers: init AlignmentMatrices: 2.8833999633789062 init managers: init AlignmentHdrs: 2.883405923843384 init managers: init HKCage: 2.8834121227264404 init managers: init Toolbar: 2.9189021587371826 init managers: init Nucleotides: 2.918929100036621 init managers: init CageBuilder: 2.9189369678497314 init managers: init Hbonds: 2.918943166732788 init managers: init IHM: 2.9189488887786865 init managers: init AddH: 2.918955087661743 init managers: init ChemGroup: 2.9189600944519043 init managers: init PDBBio: 2.918966054916382 init managers: init ReadPbonds: 2.9189720153808594 init managers: init MMTF: 2.918978214263916 init managers: init DistMonitor: 2.918982982635498 init managers: init BuildStructure: 2.9190080165863037 init managers: init ISOLDE: 2.919016122817993 init managers: init ShowAttr: 2.9190218448638916 init managers: finished: 2.919027090072632 bootstrap: init managers: 2.922652006149292 init custom: preamble: 9.5367431640625e-07 init custom: init Arrays: 1.3828277587890625e-05 init custom: init Core: 2.3126602172851562e-05 init custom: init ToolshedUtils: 0.04526805877685547 init custom: init RotamerLibMgr: 0.04529690742492676 init custom: init WebServices: 0.04530477523803711 init custom: init Movie: 0.045311927795410156 init custom: init SEQCROW: 0.057872772216796875 init custom: init AmberInfo: 0.05790996551513672 init custom: init SmoothLines: 0.05791902542114258 init custom: init ExperimentalCommands: 0.057924747467041016 init custom: init ListInfo: 0.057940006256103516 init custom: init Segment: 0.05794572830200195 init custom: init PresetMgr: 0.05795097351074219 init custom: init RestServer: 0.07546496391296387 init custom: init IO: 0.07549190521240234 init custom: init Test: 0.0755000114440918 init custom: init SchemeMgr: 0.07550692558288574 init custom: init AtomicLibrary: 0.07551288604736328 init custom: init RemoteControl: 0.07551884651184082 init custom: init Geometry: 0.07552480697631836 init custom: init DataFormats: 0.075531005859375 init custom: init Crystal: 0.07553577423095703 init custom: init Dssp: 0.07554197311401367 init custom: init AtomSearchLibrary: 0.07554793357849121 init custom: init RotamerLibsRichardson: 0.07555365562438965 init custom: init Struts: 0.07555890083312988 init custom: init Shape: 0.07556486129760742 init custom: init RotamerLibsDynameomics: 0.07557082176208496 init custom: init SpaceNavigator: 0.0755767822265625 init custom: init Graphics: 0.07558202743530273 init custom: init IMOD: 0.07558774948120117 init custom: init RotamerLibsDunbrack: 0.07559394836425781 init custom: init WebCam: 0.07559871673583984 init custom: init MapData: 0.07560491561889648 init custom: init MouseModes: 0.09369492530822754 init custom: init AtomSearch: 0.09372091293334961 init custom: init LookingGlass: 0.09372901916503906 init custom: init Vive: 0.09434080123901367 init custom: init ConnectStructure: 0.09436488151550293 init custom: init UI: 0.09437394142150879 init custom: init EMDB-SFF: 0.09437990188598633 init custom: init MLP: 0.09438586235046387 init custom: init Meeting: 0.0943918228149414 init custom: init DistUI: 0.10671782493591309 init custom: init MedicalToolbar: 0.10674691200256348 init custom: init Tug: 0.10934877395629883 init custom: init BugReporter: 0.11490106582641602 init custom: init SaveCommand: 0.11492395401000977 init custom: init PickBlobs: 0.12351679801940918 init custom: init BasicActions: 0.1251358985900879 init custom: init ResidueFit: 0.12515997886657715 init custom: init FunctionKey: 0.12579584121704102 init custom: init Contacts: 0.12581586837768555 init custom: init CommandLine: 0.12829804420471191 init custom: init Log: 0.13045978546142578 init custom: init MapEraser: 0.13196992874145508 init custom: init Registration: 0.13391494750976562 init custom: init FileHistory: 0.13393378257751465 init custom: init VolumeMenu: 0.1353306770324707 init custom: init SideView: 0.13534998893737793 init custom: init OpenCommand: 0.13535785675048828 init custom: init ButtonPanel: 0.13536477088928223 init custom: init ModelSeries: 0.13537096977233887 init custom: init Shell: 0.1353769302368164 init custom: init Label: 0.13878583908081055 init custom: init BondRot: 0.14092588424682617 init custom: init Positions: 0.14098882675170898 init custom: init Help: 0.14220690727233887 init custom: init Neuron: 0.1422269344329834 init custom: init ImageFormats: 0.14223480224609375 init custom: init ColorGlobe: 0.14225196838378906 init custom: init gltf: 0.142258882522583 init custom: init STL: 0.14226388931274414 init custom: init VTK: 0.14227795600891113 init custom: init CellPack: 0.14228391647338867 init custom: init Dicom: 0.254741907119751 init custom: init Storm: 0.25476789474487305 init custom: init Crosslinks: 0.2547767162322998 init custom: init ColorKey: 0.25478291511535645 init custom: init SDF: 0.254788875579834 init custom: init CoreFormats: 0.2547950744628906 init custom: init WavefrontOBJ: 0.25480079650878906 init custom: init ColorActions: 0.2548069953918457 init custom: init Centroids: 0.25481295585632324 init custom: init Mol2: 0.2548177242279053 init custom: init Zone: 0.25684571266174316 init custom: init mmCIF: 0.2568666934967041 init custom: init StdCommands: 0.3012969493865967 init custom: init RNALayout: 0.3013308048248291 init custom: init AlignmentAlgorithms: 0.30133891105651855 init custom: init ModelPanel: 0.3013458251953125 init custom: init PubChem: 0.30135202407836914 init custom: init Clashes: 0.3013577461242676 init custom: init Smiles: 0.3013639450073242 init custom: init uniprot: 0.30136990547180176 init custom: init PDBLibrary: 0.3013758659362793 init custom: init Map: 0.30258989334106445 init custom: init Shortcuts: 0.302609920501709 init custom: init SeqView: 0.30261874198913574 init custom: init Markers: 0.3056168556213379 init custom: init MapFilter: 0.30563879013061523 init custom: init AddCharge: 0.3056468963623047 init custom: init SwapRes: 0.32588791847229004 init custom: init ViewDockX: 0.34134507179260254 init custom: init PDB: 0.3413708209991455 init custom: init Clipper: 0.34137988090515137 init custom: init SwapAA: 0.36339879035949707 init custom: init Surface: 0.41447877883911133 init custom: init AxesPlanes: 0.4145059585571289 init custom: init MatchMaker: 0.41451382637023926 init custom: init Morph: 0.4145207405090332 init custom: init Atomic: 0.44029903411865234 init custom: init Mask: 0.4403369426727295 init custom: init Alignments: 0.44034695625305176 init custom: init ShowSequences: 0.4403538703918457 init custom: init MapFit: 0.44036102294921875 init custom: init coulombic: 0.4403667449951172 init custom: init Bumps: 0.44037294387817383 init custom: init BlastProtein: 0.44037890434265137 init custom: init MapSeries: 0.4439051151275635 init custom: init Modeller: 0.44393181800842285 init custom: init Segger: 0.4439399242401123 init custom: init BILD: 0.44394707679748535 init custom: init Maestro: 0.4439527988433838 init custom: init TapeMeasure: 0.44522976875305176 init custom: init StrudelScore: 0.4452507495880127 init custom: init MDcrds: 0.44526004791259766 init custom: init AlignmentMatrices: 0.4452660083770752 init custom: init AlignmentHdrs: 0.44527292251586914 init custom: init HKCage: 0.4452788829803467 init custom: init Toolbar: 0.4452838897705078 init custom: init Nucleotides: 0.44528985023498535 init custom: init CageBuilder: 0.4452958106994629 init custom: init Hbonds: 0.44530200958251953 init custom: init IHM: 0.44530797004699707 init custom: init AddH: 0.4453129768371582 init custom: init ChemGroup: 0.44817471504211426 init custom: init PDBBio: 0.4481947422027588 init custom: init ReadPbonds: 0.44820308685302734 init custom: init MMTF: 0.4482100009918213 init custom: init DistMonitor: 0.45157408714294434 init custom: init BuildStructure: 0.45160698890686035 init custom: init ISOLDE: 0.994269847869873 init custom: init ShowAttr: 0.9942998886108398 init custom: finished: 0.9943068027496338 bootstrap: custom inits: 3.9169740676879883 bootstrap: finished: 3.9169797897338867 toolshed boostrap bundles 6.728172063827515 start Tools manager 6.728227138519287 start Tasks manager 6.728279113769531 start Undo manager 6.7326500415802 toolshed full init 6.732667922973633 Unable to load numpy_formathandler accelerator from OpenGL_accelerate build UI 8.735129833221436 misc opts 9.378741979598999 close splash 9.378779888153076 log version 9.379090070724487 start redraw 9.396084070205688 init 'done': 9.396654844284058