[chimerax-users] getting sequences into the Structure Prediction

Marc Pusey mlp0041 at uah.edu
Wed Nov 17 07:36:15 PST 2021


Hi -

I may be missing something very obvious, but...  I am trying to input and
use protein sequences for structure predictions using the AlphaFold feature
of ChimeraX.  I've not had any problems when the sequence can be obtained
from a UniProt file, but several of the proteins I'm working with do not
have such a file available.  Additionally, there is going to come a time
where I will want to see what the consequences are from making mutations to
those sequences that are available from UniProt.  The input gives the
option of either Paste or UniProt, but I've not found a way to do a simple
cut and paste to put in the sequence.

I'm using a Mac running Mojave, version 10.14.6.

Thanks!

Marc Pusey


-- 
Marc Pusey
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