[chimerax-users] resfit command for nuclei acid

[Wen-Jin Winston Wu]

Hi Tom,

Thanks a lot for adding this to the request database.
Resfit works so nicely on protein cryoEM data. Hopefully I can use it on
nucleic acid in the future.

Thanks again,

Winston

-----Original Message-----
From: Tom Goddard [mailto:goddard at sonic.net] 
Sent: Wednesday, July 28, 2021 12:13 AM
To: Wen-Jin Winston Wu <winston at gate.sinica.edu.tw>
Cc: ChimeraX Users Help <chimerax-users at cgl.ucsf.edu>
Subject: Re: [chimerax-users] resfit command for nuclei acid

Hi Winston,

Yes, the resfit command only works on proteins and requires the N,CA,C
backbone atoms to align each residue in the view in a standard orientation.
I added to our feature request database making resfit work on nucleic acids

	https://www.rbvi.ucsf.edu/trac/ChimeraX/ticket/4961

  Tom


> On Jul 27, 2021, at 6:17 AM, Wen-Jin Winston Wu via ChimeraX-users
<chimerax-users at cgl.ucsf.edu> wrote:
> 
> Hi Tom,
> 
> I have just tried to use the "resfit" command ChimeraX Does the nice 
> command of "resfit" in ChimeraX support inspection on nuclei acid? It
seems that it only support protein residues as with the command " resfit
#1/D:DT map #3", it returned with the message that "None of the 9 specified
residues have backbone atoms N, CA and C".
> 
> I have not checked out the daily build version yet, but thought that I can
ask first.
> 
> Thanks,
> 
> Best wishes,
> 
> Winston
> 
> 
> 
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