[Chimera-users] Select close residues by name

Marco Sette sette at uniroma2.it
Thu Mar 23 03:57:06 PDT 2023


Dear all,

I have a series of pdb files and I would select particular regions that 
contain specific residues, for example KAYFPG, of which I do not know 
the exact position in the sequence.
Actually I open the sequence window and search for the sequence but this 
is time consuming if you have multiple pdb. Is there a command to 
shorten this search?
Using the select command seems not possible as I can select all residues 
of a particular amino acid and not neighbour residues by name.
Thanks for your help,
Best
Marco

-- 
Dr.Marco Sette, Ph.D.
Department of Chemical Sciences and Technology
University of Rome, "Tor Vergata"
via della Ricerca Scientifica, 00133, Rome, Italy
e-mail: sette at uniroma2.it
e-mail: m77it at yahoo.it
Tel.: +39-0672594424
Fax: +39-0672594328
http://stc.uniroma2.it/?page_id=622&cn-entry-slug=marco-sette



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