[Chimera-users] save map

[Wu, Weimin /US]

Thank you,

Weimin

From: Elaine Meng <meng at cgl.ucsf.edu>
Sent: Tuesday, September 27, 2022 12:06 PM
To: Wu, Weimin /US <Weimin.Wu at sanofi.com>
Cc: chimera-users at cgl.ucsf.edu
Subject: Re: [Chimera-users] save map

Dear Weimin,
The map files do not contain orientation information, so you can't simply save the map after rotating it. Instead you would need to make a new map by resampling the moved map onto the grid of the reference map with "vop resample" -- this is explained in the bottom section of this page, "Saving Maps After Fitting":
<https://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#afterfitting<https://www.rbvi.ucsf.edu/chimera/docs/UsersGuide/savemodel.html#afterfitting>>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Sep 27, 2022, at 7:47 AM, Wu, Weimin /US via Chimera-users <chimera-users at cgl.ucsf.edu<mailto:chimera-users at cgl.ucsf.edu>> wrote:
>
> Hi,
> Does Chimera have a built-in function to save the map after it is fit into another map? The current save map could not save the new orientation and new location.
> Thanks,
> Weimin
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