[Chimera-users] help

Eric Pettersen pett at cgl.ucsf.edu
Thu Sep 22 16:41:45 PDT 2022


Hi Carlos,
	The prmtop file is the parameters/topology file, which contains information about atom names/types, bond connectivity, etc. and typically ends in .prmtop.  It is not the .nc file, which contains coordinates for each frame of the trajectory.  Click on the ‘Help’ button in the Get Ensemble Info dialog to get more information about these files.

--Eric

	Eric Pettersen
	UCSF Computer Graphics Lab


> On Sep 21, 2022, at 6:17 PM, Carlos Alberto Lira Júnior via Chimera-users <chimera-users at cgl.ucsf.edu> wrote:
> 
> Hello, I'm trying to open a file through tools>MD/Ensemble>MD movie. Then I add the path of the file but several errors appear, as shown in the images below. Therefore, I ask for help to solve this problem. I point out that the files were opening normally
> 
> <image.png>
> <image.png>
> <image.png>
> <image.png>
> --
> "Não te deixes vencer pelo mal, mas vence o mal com o bem”
>   (Romanos 12:21)
> 
> Prof. Carlos Alberto Lira Junior
> (98) 9 988298677                                                                                      
> Lattes <http://lattes.cnpq.br/3535248767494263>
> AVISO DE CONFIDENCIALIDADE: Esta mensagem, e qualquer conteúdo anexo, pode conter informações confidenciais e/ou sensíveis, destinadas exclusivamente aos seus destinatários. Se você recebeu esta mensagem e qualquer conteúdo anexo por erro, qualquer reenvio, disseminação, distribuição ou cópia é proibida por lei. Por favor notifique o remetente imediatamente e destrua a mensagem e todo o conteúdo anexo. 
> 
> CONFIDENTIALITY NOTICE: This message and any attachment(s) may contain confidential and / or sensitive information and is for the sole use of its intended recipient. If you receive this transmittal and any attachment(s) in error, any review, dissemination, distribution or copying is prohibited by law. Please notify the sender and immediately destroy the message and all its attachments. Thank you for your co-operation.
> 
> 
> Missão Institucional:   Promover educação profissional, científica e tecnológica, por meio da integração do ensino, pesquisa e extensão com foco na formação do cidadão e no desenvolvimento socioeconômico sustentável._______________________________________________
> Chimera-users mailing list: Chimera-users at cgl.ucsf.edu
> Manage subscription: https://www.rbvi.ucsf.edu/mailman/listinfo/chimera-users

-------------- next part --------------
An HTML attachment was scrubbed...
URL: <http://www.rbvi.ucsf.edu/pipermail/chimera-users/attachments/20220922/3eef0ad7/attachment.html>


More information about the Chimera-users mailing list