[Chimera-users] question Help

Firat KURT f.kurt at alparslan.edu.tr
Mon May 16 04:01:07 PDT 2022


*Hi, *
*I have several problems regarding running some features of and
registration of chimera. *

*Firstly, I am not able to do registration. It keeps giving the error
message below: *

Error reading 1yti:
Error during PDB fetch: [Errno socket error] [Errno 10054] An existing
connection was forcibly closed by the remote host

Model 0 (AT4G26590_1_ATOPT5.pdb) appears to be a protein without secondary
structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.
Traceback from web service request (connection setup):
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 11, in __init__
    self._setup(serviceName, opalURL, sessionData)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 50, in _setup
    self.sudsClient = Client(self.serviceURL + "?wsdl", **kw)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\client.py", line
115, in __init__
    self.wsdl = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
150, in open
    d = self.fn(url, self.options)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\wsdl.py", line
136, in __init__
    d = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
74, in open
    d = self.download(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
100, in download
    return sax.parse(string=content)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\sax\parser.py",
line 133, in parse
    sax.parse(source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
111, in parse
    xmlreader.IncrementalParser.parse(self, source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\xmlreader.py", line
123, in parse
    self.feed(buffer)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
224, in feed
    self._err_handler.fatalError(exc)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\handler.py", line 38,
in fatalError
    raise exception
SAXParseException: <unknown>:76:2: mismatched tag

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Traceback from Blastp request:
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\blastpdb\ParserBlastP.py", line
362, in _initBlast
    self.opal = OpalService(self.ServiceName)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 21, in __init__
    raise NonChimeraError("Web service appears "
NonChimeraError: Web service appears to be down.  See Reply Log for more
details.

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Blast web service appears to be down.  See Reply Log for more details.

Traceback from web service request (connection setup):
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 11, in __init__
    self._setup(serviceName, opalURL, sessionData)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 50, in _setup
    self.sudsClient = Client(self.serviceURL + "?wsdl", **kw)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\client.py", line
115, in __init__
    self.wsdl = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
150, in open
    d = self.fn(url, self.options)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\wsdl.py", line
136, in __init__
    d = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
74, in open
    d = self.download(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
100, in download
    return sax.parse(string=content)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\sax\parser.py",
line 133, in parse
    sax.parse(source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
111, in parse
    xmlreader.IncrementalParser.parse(self, source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\xmlreader.py", line
123, in parse
    self.feed(buffer)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
224, in feed
    self._err_handler.fatalError(exc)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\handler.py", line 38,
in fatalError
    raise exception
SAXParseException: <unknown>:76:2: mismatched tag

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Traceback from Blastp request:
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\blastpdb\ParserBlastP.py", line
362, in _initBlast
    self.opal = OpalService(self.ServiceName)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 21, in __init__
    raise NonChimeraError("Web service appears "
NonChimeraError: Web service appears to be down.  See Reply Log for more
details.

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Blast web service appears to be down.  See Reply Log for more details.

error Exception in Tk callback
  Function: <bound method BugReportGUI.Submit of
<BugReport.BugReportGUI.BugReportGUI object at 0x000000001A1CAFD0>> (type:
<type 'instancemethod'>)
  Module: <module 'BugReport.BugReportGUI' from 'C:\Program Files\Chimera
1.16\share\BugReport\BugReportGUI.pyc'> (line: 348)
  Args: ()
Traceback (innermost last):
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\Pmw\Pmw_1_3_3\lib\PmwBase.py", line 1747, in
__call__
    return apply(self.func, args)
  File "C:\Program Files\Chimera 1.16\share\BugReport\BugReportGUI.py",
line 426, in Submit
    BUG_SELECTOR, fields)
  File "C:\Program Files\Chimera 1.16\share\CGLutil\multipart.py", line 33,
in post_multipart_formdata
    retcode, retmsg, headers = h.getreply()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1196, in
getreply
    response = self._conn.getresponse()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1121, in
getresponse
    response.begin()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 438, in
begin
    version, status, reason = self._read_status()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 394, in
_read_status
    line = self.fp.readline(_MAXLINE + 1)
  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)
error: [Errno 10054] An existing connection was forcibly closed by the
remote host

error: [Errno 10054] An existing connection was forcibly closed by the
remote host

  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)

See reply log for Python traceback.


IOError Exception in Tk callback
  Function: <function command at 0x00000000151E8898> (type: <type
'function'>)
  Module: <module 'chimera.baseDialog' from 'C:\Program Files\Chimera
1.16\share\chimera\baseDialog.pyc'> (line: 447)
  Args: ()
Traceback (innermost last):
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\Pmw\Pmw_1_3_3\lib\PmwBase.py", line 1747, in
__call__
    return apply(self.func, args)
  File "C:\Program Files\Chimera 1.16\share\chimera\baseDialog.py", line
449, in command
    getattr(s, buttonFuncName(txt))()
  File "C:\Program Files\Chimera 1.16\share\chimera\register.py", line 294,
in Register
    file = urllib.urlopen(regURL, params)
  File "C:\Program Files\Chimera 1.16\bin\lib\urllib.py", line 89, in
urlopen
    return opener.open(url, data)
  File "C:\Program Files\Chimera 1.16\bin\lib\urllib.py", line 215, in open
    return getattr(self, name)(url, data)
  File "C:\Program Files\Chimera 1.16\bin\lib\urllib.py", line 351, in
open_http
    errcode, errmsg, headers = h.getreply()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1196, in
getreply
    response = self._conn.getresponse()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1121, in
getresponse
    response.begin()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 438, in
begin
    version, status, reason = self._read_status()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 394, in
_read_status
    line = self.fp.readline(_MAXLINE + 1)
  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)
IOError: [Errno socket error] [Errno 10054] An existing connection was
forcibly closed by the remote host

IOError: [Errno socket error] [Errno 10054] An existing connection was
forcibly closed by the remote host

  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)

See reply log for Python traceback.


*Secondly, when I try to model a sequence using modeller, I am having error
message in first step. When I select "Tools>sequence>sequence>balst
protein" and paste the sequence of interest to the respective area, I got
the error message below :*

Error reading 1yti:
Error during PDB fetch: [Errno socket error] [Errno 10054] An existing
connection was forcibly closed by the remote host

Model 0 (AT4G26590_1_ATOPT5.pdb) appears to be a protein without secondary
structure assignments.
Automatically computing assignments using 'ksdssp' and parameter values:
  energy cutoff -0.5
  minimum helix length 3
  minimum strand length 3
Use command 'help ksdssp' for more information.
Traceback from web service request (connection setup):
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 11, in __init__
    self._setup(serviceName, opalURL, sessionData)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 50, in _setup
    self.sudsClient = Client(self.serviceURL + "?wsdl", **kw)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\client.py", line
115, in __init__
    self.wsdl = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
150, in open
    d = self.fn(url, self.options)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\wsdl.py", line
136, in __init__
    d = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
74, in open
    d = self.download(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
100, in download
    return sax.parse(string=content)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\sax\parser.py",
line 133, in parse
    sax.parse(source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
111, in parse
    xmlreader.IncrementalParser.parse(self, source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\xmlreader.py", line
123, in parse
    self.feed(buffer)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
224, in feed
    self._err_handler.fatalError(exc)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\handler.py", line 38,
in fatalError
    raise exception
SAXParseException: <unknown>:76:2: mismatched tag

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Traceback from Blastp request:
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\blastpdb\ParserBlastP.py", line
362, in _initBlast
    self.opal = OpalService(self.ServiceName)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 21, in __init__
    raise NonChimeraError("Web service appears "
NonChimeraError: Web service appears to be down.  See Reply Log for more
details.

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Blast web service appears to be down.  See Reply Log for more details.

Traceback from web service request (connection setup):
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 11, in __init__
    self._setup(serviceName, opalURL, sessionData)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 50, in _setup
    self.sudsClient = Client(self.serviceURL + "?wsdl", **kw)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\client.py", line
115, in __init__
    self.wsdl = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
150, in open
    d = self.fn(url, self.options)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\wsdl.py", line
136, in __init__
    d = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
74, in open
    d = self.download(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
100, in download
    return sax.parse(string=content)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\sax\parser.py",
line 133, in parse
    sax.parse(source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
111, in parse
    xmlreader.IncrementalParser.parse(self, source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\xmlreader.py", line
123, in parse
    self.feed(buffer)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
224, in feed
    self._err_handler.fatalError(exc)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\handler.py", line 38,
in fatalError
    raise exception
SAXParseException: <unknown>:76:2: mismatched tag

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Traceback from Blastp request:
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\blastpdb\ParserBlastP.py", line
362, in _initBlast
    self.opal = OpalService(self.ServiceName)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 21, in __init__
    raise NonChimeraError("Web service appears "
NonChimeraError: Web service appears to be down.  See Reply Log for more
details.

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Blast web service appears to be down.  See Reply Log for more details.

error Exception in Tk callback
  Function: <bound method BugReportGUI.Submit of
<BugReport.BugReportGUI.BugReportGUI object at 0x000000001A1CAFD0>> (type:
<type 'instancemethod'>)
  Module: <module 'BugReport.BugReportGUI' from 'C:\Program Files\Chimera
1.16\share\BugReport\BugReportGUI.pyc'> (line: 348)
  Args: ()
Traceback (innermost last):
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\Pmw\Pmw_1_3_3\lib\PmwBase.py", line 1747, in
__call__
    return apply(self.func, args)
  File "C:\Program Files\Chimera 1.16\share\BugReport\BugReportGUI.py",
line 426, in Submit
    BUG_SELECTOR, fields)
  File "C:\Program Files\Chimera 1.16\share\CGLutil\multipart.py", line 33,
in post_multipart_formdata
    retcode, retmsg, headers = h.getreply()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1196, in
getreply
    response = self._conn.getresponse()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1121, in
getresponse
    response.begin()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 438, in
begin
    version, status, reason = self._read_status()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 394, in
_read_status
    line = self.fp.readline(_MAXLINE + 1)
  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)
error: [Errno 10054] An existing connection was forcibly closed by the
remote host

error: [Errno 10054] An existing connection was forcibly closed by the
remote host

  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)

See reply log for Python traceback.


IOError Exception in Tk callback
  Function: <function command at 0x00000000151E8898> (type: <type
'function'>)
  Module: <module 'chimera.baseDialog' from 'C:\Program Files\Chimera
1.16\share\chimera\baseDialog.pyc'> (line: 447)
  Args: ()
Traceback (innermost last):
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\Pmw\Pmw_1_3_3\lib\PmwBase.py", line 1747, in
__call__
    return apply(self.func, args)
  File "C:\Program Files\Chimera 1.16\share\chimera\baseDialog.py", line
449, in command
    getattr(s, buttonFuncName(txt))()
  File "C:\Program Files\Chimera 1.16\share\chimera\register.py", line 294,
in Register
    file = urllib.urlopen(regURL, params)
  File "C:\Program Files\Chimera 1.16\bin\lib\urllib.py", line 89, in
urlopen
    return opener.open(url, data)
  File "C:\Program Files\Chimera 1.16\bin\lib\urllib.py", line 215, in open
    return getattr(self, name)(url, data)
  File "C:\Program Files\Chimera 1.16\bin\lib\urllib.py", line 351, in
open_http
    errcode, errmsg, headers = h.getreply()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1196, in
getreply
    response = self._conn.getresponse()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 1121, in
getresponse
    response.begin()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 438, in
begin
    version, status, reason = self._read_status()
  File "C:\Program Files\Chimera 1.16\bin\lib\httplib.py", line 394, in
_read_status
    line = self.fp.readline(_MAXLINE + 1)
  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)
IOError: [Errno socket error] [Errno 10054] An existing connection was
forcibly closed by the remote host

IOError: [Errno socket error] [Errno 10054] An existing connection was
forcibly closed by the remote host

  File "C:\Program Files\Chimera 1.16\bin\lib\socket.py", line 480, in
readline
    data = self._sock.recv(self._rbufsize)

See reply log for Python traceback.


Traceback from web service request (connection setup):
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 11, in __init__
    self._setup(serviceName, opalURL, sessionData)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 50, in _setup
    self.sudsClient = Client(self.serviceURL + "?wsdl", **kw)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\client.py", line
115, in __init__
    self.wsdl = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
150, in open
    d = self.fn(url, self.options)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\wsdl.py", line
136, in __init__
    d = reader.open(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
74, in open
    d = self.download(url)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\reader.py", line
100, in download
    return sax.parse(string=content)
  File "C:\Program Files\Chimera
1.16\bin\lib\site-packages\suds_jurko-0.6-py2.7.egg\suds\sax\parser.py",
line 133, in parse
    sax.parse(source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
111, in parse
    xmlreader.IncrementalParser.parse(self, source)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\xmlreader.py", line
123, in parse
    self.feed(buffer)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\expatreader.py", line
224, in feed
    self._err_handler.fatalError(exc)
  File "C:\Program Files\Chimera 1.16\bin\lib\xml\sax\handler.py", line 38,
in fatalError
    raise exception
SAXParseException: <unknown>:76:2: mismatched tag

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Traceback from Blastp request:
Traceback (most recent call last):
  File "C:\Program Files\Chimera 1.16\share\blastpdb\ParserBlastP.py", line
362, in _initBlast
    self.opal = OpalService(self.ServiceName)
  File "C:\Program Files\Chimera 1.16\share\WebServices\opal_client.py",
line 21, in __init__
    raise NonChimeraError("Web service appears "
NonChimeraError: Web service appears to be down.  See Reply Log for more
details.

Typically, if you get a TypeError, it's a problem on the remote server
and it should be fixed shortly.  If you get a different error or
get TypeError consistently for more than a day, please report the
problem using the Report a Bug... entry in the Help menu.  Please
include the traceback printed above as part of the problem description.
Blast web service appears to be down.  See Reply Log for more details.


*I also attached the image of my input. Would you help me with this please?
How can I fix these problems??*
*My operating system is Windows 10 64X and chimera version is 1.16*
*Regards, *




[image: image.png]


-- 
İyi çalışmalar dilerim,

Doç. Dr. Fırat Kurt
Bitkisel Üretim ve Teknolojileri Bölümü
Uygulamalı Bilimler Fakültesi
Muş Alparslan Üniversitesi
Muş-Türkiye
Tel       :+90 436 249 10 83 Dahili: 2686
Fax      :+90 436 231 22 01
----------------------------------------------
Fırat Kurt, Ph. D.
Associate Prof. of Plant Biotechnology
Department of Plant Production and Technologies
Faculty of Applied Sciences
Mus Alparslan University
Mus-Turkey
Phone :+90 436 249 10 83 Ext. :2036
Fax     :+90 436 231 22 01
www.alparslan.edu.tr
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