[Chimera-users] ViewDock problem

[Elaine Meng]

Hi Denis,
It's a little hard to see when you have the molecular surface also shown, but I'm guessing you need to turn on the H-Bond option "If endpoint atom hidden, show endpoint residue"

<http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/findhbond/findhbond.html>

This is because the H-bond line can't be shown unless the atoms on both of its ends are shown.  That option will show more residues of the receptor so that all of the identified H-bonds will be shown.

Regards,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Jul 30, 2020, at 5:20 AM, Krivic, Denis <denis.krivic at medunigraz.at> wrote:
> 
> Hello,
> Does anybody know why the viewdock calculates Hbonds, but doesn't want to show them (in some cases-picture, not always)?
> Kind regards,
> Denis