[Chimera-users] MINIMIZATION BY CHIMERA

[Elaine Meng]

Hi Jonathan,
You just set the options you want and then click Apply or OK on some dialogs.  Each dialog has a Help button that you can click to see the explanation of all the options. 

You can use menu: Tools... Structure Editing... Minimize Structure, or the command "minimize."  

Here is the Help page for Minimize Structure, the same thing that you would get by clicking the Help button on that tool.
<http://www.rbvi.ucsf.edu/chimera/docs/ContributedSoftware/minimize/minimize.html>

Searching finds a long YouTube video "energy minimization in UCSF Chimera" ... maybe useful to you.  I have not viewed it.
<https://www.youtube.com/watch?v=37rgX2MMhZ0>

I hope this helps,
Elaine
-----
Elaine C. Meng, Ph.D.                       
UCSF Chimera(X) team
Department of Pharmaceutical Chemistry
University of California, San Francisco

> On Apr 9, 2020, at 12:46 AM, Jonathan Javid <jonathanjavid257 at gmail.com> wrote:
> 
> Dear Instructor 
> 
> Please guide meabout how minization is performed of protein Structure from chimera.Guide me step by step kindly.
> 
> Waitig for your positive response. Thank you 
> 
> Reagrds
> Jonathan Javid    
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